RNA–Protein interactions for RNA: ENST00000429035.1

SDC1-204, Transcript of syndecan 1, humanhuman

TSL 3

Gene SDC1, Length 646 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-204ENST00000429035 MYMKA6NI61 221 aa15.65■□□□□ 0.1
SDC1-204ENST00000429035 ITGB3P05106 788 aa15.65■□□□□ 0.1
SDC1-204ENST00000429035 CHRNB1P11230 501 aa15.65■□□□□ 0.1
SDC1-204ENST00000429035 PDCP20941 246 aa15.65■□□□□ 0.1
SDC1-204ENST00000429035 CTHP32929 405 aa15.65■□□□□ 0.1
SDC1-204ENST00000429035 STAT6P42226 847 aa15.65■□□□□ 0.1
SDC1-204ENST00000429035 CXCL12P48061 93 aa15.65■□□□□ 0.1
SDC1-204ENST00000429035 TSPY1Q01534 308 aa15.65■□□□□ 0.1
SDC1-204ENST00000429035 KCNA1Q09470 495 aa15.65■□□□□ 0.1
SDC1-204ENST00000429035 FCHO2Q0JRZ9 810 aa15.65■□□□□ 0.1
SDC1-204ENST00000429035 POSTNQ15063 836 aa15.65■□□□□ 0.1
SDC1-204ENST00000429035 PON2Q15165 354 aa15.65■□□□□ 0.1
SDC1-204ENST00000429035 PTPAQ15257 358 aa15.65■□□□□ 0.1
SDC1-204ENST00000429035 HEATR6Q6AI08 1181 aaKnown RBP15.65■□□□□ 0.1
SDC1-204ENST00000429035 TXNDC11Q6PKC3 985 aa15.65■□□□□ 0.1
SDC1-204ENST00000429035 SV2BQ7L1I2 683 aa15.65■□□□□ 0.1
SDC1-204ENST00000429035 ZNF720Q7Z2F6 126 aa15.65■□□□□ 0.1
SDC1-204ENST00000429035 DCP1BQ8IZD4 617 aaKnown RBP15.65■□□□□ 0.1
SDC1-204ENST00000429035 TTC16Q8NEE8 873 aa15.65■□□□□ 0.1
SDC1-204ENST00000429035 SPPL2BQ8TCT7 592 aa15.65■□□□□ 0.1
SDC1-204ENST00000429035 BORCS6Q96GS4 357 aa15.65■□□□□ 0.1
SDC1-204ENST00000429035 FAM84AQ96KN4 292 aa15.65■□□□□ 0.1
SDC1-204ENST00000429035 ACCSQ96QU6 501 aa15.65■□□□□ 0.1
SDC1-204ENST00000429035 ST6GALNAC4Q9H4F1 302 aa15.65■□□□□ 0.1
SDC1-204ENST00000429035 TASP1Q9H6P5 420 aa15.65■□□□□ 0.1
SDC1-204ENST00000429035 FOXD4L1Q9NU39 408 aa15.65■□□□□ 0.1
SDC1-204ENST00000429035 RBAKQ9NYW8 714 aaPredicted RBP15.65■□□□□ 0.1
SDC1-204ENST00000429035 SEL1LQ9UBV2 794 aa15.65■□□□□ 0.1
SDC1-204ENST00000429035 MAGED2Q9UNF1 606 aaPredicted RBP15.65■□□□□ 0.1
SDC1-204ENST00000429035 GOLGA8IPA6NC78 632 aa15.64■□□□□ 0.09
SDC1-204ENST00000429035 GOLGA8JA6NMD2 632 aa15.64■□□□□ 0.09
SDC1-204ENST00000429035 KPNA7A9QM74 516 aa15.64■□□□□ 0.09
SDC1-204ENST00000429035 CHURC1-FNTBB4DL54 471 aa15.64■□□□□ 0.09
SDC1-204ENST00000429035 PRPF40AO75400 957 aaKnown RBP15.64■□□□□ 0.09
SDC1-204ENST00000429035 KRT19P08727 400 aa15.64■□□□□ 0.09
SDC1-204ENST00000429035 GAP43P17677 238 aa15.64■□□□□ 0.09
SDC1-204ENST00000429035 FNTBP49356 437 aa15.64■□□□□ 0.09
SDC1-204ENST00000429035 GPR15P49685 360 aa15.64■□□□□ 0.09
SDC1-204ENST00000429035 WNT7BP56706 349 aa15.64■□□□□ 0.09
SDC1-204ENST00000429035 TNK2Q07912 1038 aa15.64■□□□□ 0.09
SDC1-204ENST00000429035 RESTQ13127 1097 aa15.64■□□□□ 0.09
SDC1-204ENST00000429035 L1TD1Q5T7N2 865 aaKnown RBP15.64■□□□□ 0.09
SDC1-204ENST00000429035 SDHAF4Q5VUM1 108 aa15.64■□□□□ 0.09
SDC1-204ENST00000429035 C1orf228Q6PIY5 440 aa15.64■□□□□ 0.09
SDC1-204ENST00000429035 CRELD2Q6UXH1 353 aaPredicted RBP15.64■□□□□ 0.09
SDC1-204ENST00000429035 BRSK2Q8IWQ3 736 aa15.64■□□□□ 0.09
SDC1-204ENST00000429035 ZSWIM2Q8NEG5 633 aa15.64■□□□□ 0.09
SDC1-204ENST00000429035 C2orf15Q8WU43 125 aaKnown RBP15.64■□□□□ 0.09
SDC1-204ENST00000429035 NELL1Q92832 810 aa15.64■□□□□ 0.09
SDC1-204ENST00000429035 LRRC3BQ96PB8 259 aa15.64■□□□□ 0.09
SDC1-204ENST00000429035 PI4K2AQ9BTU6 479 aa15.64■□□□□ 0.09
SDC1-204ENST00000429035 CDV3Q9UKY7 258 aaKnown RBP15.64■□□□□ 0.09
SDC1-204ENST00000429035 AGAP1Q9UPQ3 857 aa15.64■□□□□ 0.09
SDC1-204ENST00000429035 PCDHB5Q9Y5E4 795 aa15.64■□□□□ 0.09
SDC1-204ENST00000429035 STYXL1Q9Y6J8 313 aa15.64■□□□□ 0.09
SDC1-204ENST00000429035 MYBPHLA2RUH7 354 aa15.63■□□□□ 0.09
SDC1-204ENST00000429035 PPP1R37O75864 691 aa15.63■□□□□ 0.09
SDC1-204ENST00000429035 HAPLN1P10915 354 aaPredicted RBP15.63■□□□□ 0.09
SDC1-204ENST00000429035 TDGF1P13385 188 aa15.63■□□□□ 0.09
SDC1-204ENST00000429035 ACAT1P24752 427 aaKnown RBP15.63■□□□□ 0.09
SDC1-204ENST00000429035 ADSSP30520 456 aa15.63■□□□□ 0.09
SDC1-204ENST00000429035 AVPR1AP37288 418 aa15.63■□□□□ 0.09
SDC1-204ENST00000429035 PNPLA4P41247 253 aa15.63■□□□□ 0.09
SDC1-204ENST00000429035 CASP5P51878 434 aa15.63■□□□□ 0.09
SDC1-204ENST00000429035 DMWDQ09019 674 aa15.63■□□□□ 0.09
SDC1-204ENST00000429035 SRSF5Q13243 272 aaKnown RBP15.63■□□□□ 0.09
SDC1-204ENST00000429035 CUL4AQ13619 759 aa15.63■□□□□ 0.09
SDC1-204ENST00000429035 GAS6Q14393 721 aa15.63■□□□□ 0.09
SDC1-204ENST00000429035 CCDC73Q6ZRK6 1079 aa15.63■□□□□ 0.09
SDC1-204ENST00000429035 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.63■□□□□ 0.09
SDC1-204ENST00000429035 LRRTM3Q86VH5 581 aa15.63■□□□□ 0.09
SDC1-204ENST00000429035 GPR161Q8N6U8 529 aaKnown RBP15.63■□□□□ 0.09
SDC1-204ENST00000429035 MAB21L3Q8N8X9 362 aa15.63■□□□□ 0.09
SDC1-204ENST00000429035 PANK2Q9BZ23 570 aa15.63■□□□□ 0.09
SDC1-204ENST00000429035 PCIF1Q9H4Z3 704 aa15.63■□□□□ 0.09
SDC1-204ENST00000429035 IL21Q9HBE4 155 aa15.63■□□□□ 0.09
SDC1-204ENST00000429035 TMLHEQ9NVH6 421 aa15.63■□□□□ 0.09
SDC1-204ENST00000429035 THG1LQ9NWX6 298 aaKnown RBP15.63■□□□□ 0.09
SDC1-204ENST00000429035 OBP2AQ9NY56 170 aa15.63■□□□□ 0.09
SDC1-204ENST00000429035 HSFX1Q9UBD0 423 aa15.63■□□□□ 0.09
SDC1-204ENST00000429035 SRPRBQ9Y5M8 271 aaKnown RBP15.63■□□□□ 0.09
SDC1-204ENST00000429035 TMEM191BP0C7N4 346 aa15.62■□□□□ 0.09
SDC1-204ENST00000429035 PLCB2Q00722 1185 aa15.62■□□□□ 0.09
SDC1-204ENST00000429035 LMNB2Q03252 620 aa15.62■□□□□ 0.09
SDC1-204ENST00000429035 SPEM2Q0P670 501 aa15.62■□□□□ 0.09
SDC1-204ENST00000429035 SMARCB1Q12824 385 aa15.62■□□□□ 0.09
SDC1-204ENST00000429035 SIM2Q14190 667 aaPredicted RBP15.62■□□□□ 0.09
SDC1-204ENST00000429035 LMBRD2Q68DH5 695 aaPredicted RBP15.62■□□□□ 0.09
SDC1-204ENST00000429035 RALGPS2Q86X27 583 aaPredicted RBP15.62■□□□□ 0.09
SDC1-204ENST00000429035 NT5DC4Q86YG4 428 aa15.62■□□□□ 0.09
SDC1-204ENST00000429035 SPEM1Q8N4L4 309 aa15.62■□□□□ 0.09
SDC1-204ENST00000429035 PDILTQ8N807 584 aa15.62■□□□□ 0.09
SDC1-204ENST00000429035 C1orf127Q8N9H9 656 aa15.62■□□□□ 0.09
SDC1-204ENST00000429035 CACTINQ8WUQ7 758 aaKnown RBP15.62■□□□□ 0.09
SDC1-204ENST00000429035 DNAJC19Q96DA6 116 aa15.62■□□□□ 0.09
SDC1-204ENST00000429035 CBWD1Q9BRT8 395 aa15.62■□□□□ 0.09
SDC1-204ENST00000429035 FGFBP2Q9BYJ0 223 aa15.62■□□□□ 0.09
SDC1-204ENST00000429035 MTMR12Q9C0I1 747 aa15.62■□□□□ 0.09
SDC1-204ENST00000429035 TRPC7Q9HCX4 862 aa15.62■□□□□ 0.09
SDC1-204ENST00000429035 PANK4Q9NVE7 773 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms