RNA–Protein interactions for RNA: ENST00000428962.2

THBS3-202, Transcript of thrombospondin 3, humanhuman

TSL 2

Gene THBS3, Length 1,833 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-202ENST00000428962 SERPINB12Q96P63 405 aa14.47□□□□□ -0.09
THBS3-202ENST00000428962 ASB7Q9H672 318 aa14.47□□□□□ -0.09
THBS3-202ENST00000428962 WDR35Q9P2L0 1181 aa14.47□□□□□ -0.09
THBS3-202ENST00000428962 NXF1Q9UBU9 619 aaKnown RBP14.47□□□□□ -0.09
THBS3-202ENST00000428962 CLEC11AQ9Y240 323 aa14.47□□□□□ -0.09
THBS3-202ENST00000428962 MCM3APO60318 1980 aa14.46□□□□□ -0.09
THBS3-202ENST00000428962 TP73O15350 636 aa14.46□□□□□ -0.09
THBS3-202ENST00000428962 LIASO43766 372 aa14.46□□□□□ -0.09
THBS3-202ENST00000428962 TTC4O95801 387 aa14.46□□□□□ -0.09
THBS3-202ENST00000428962 GJB1P08034 283 aa14.46□□□□□ -0.09
THBS3-202ENST00000428962 GSCP56915 257 aaPredicted RBP14.46□□□□□ -0.09
THBS3-202ENST00000428962 ZNF252P-AS1Q0IIN9 211 aa14.46□□□□□ -0.09
THBS3-202ENST00000428962 TFDP3Q5H9I0 405 aa14.46□□□□□ -0.09
THBS3-202ENST00000428962 IZUMO3Q5VZ72 239 aa14.46□□□□□ -0.09
THBS3-202ENST00000428962 SCARA3Q6AZY7 606 aa14.46□□□□□ -0.09
THBS3-202ENST00000428962 SPOCD1Q6ZMY3 1216 aa14.46□□□□□ -0.09
THBS3-202ENST00000428962 YTHDF3Q7Z739 585 aaKnown RBP14.46□□□□□ -0.09
THBS3-202ENST00000428962 GPRC5AQ8NFJ5 357 aa14.46□□□□□ -0.09
THBS3-202ENST00000428962 PPTC7Q8NI37 304 aa14.46□□□□□ -0.09
THBS3-202ENST00000428962 FNIP1Q8TF40 1166 aa14.46□□□□□ -0.09
THBS3-202ENST00000428962 TFAP2BQ92481 460 aa14.46□□□□□ -0.09
THBS3-202ENST00000428962 RAPGEF5Q92565 580 aa14.46□□□□□ -0.09
THBS3-202ENST00000428962 CYP3A43Q9HB55 503 aa14.46□□□□□ -0.09
THBS3-202ENST00000428962 LRRC4CQ9HCJ2 640 aa14.46□□□□□ -0.09
THBS3-202ENST00000428962 PDGFCQ9NRA1 345 aa14.46□□□□□ -0.09
THBS3-202ENST00000428962 AAASQ9NRG9 546 aa14.46□□□□□ -0.09
THBS3-202ENST00000428962 NFICP08651 508 aa14.45□□□□□ -0.1
THBS3-202ENST00000428962 STAG3L1P0CL83 205 aa14.45□□□□□ -0.1
THBS3-202ENST00000428962 INSRRP14616 1297 aa14.45□□□□□ -0.1
THBS3-202ENST00000428962 ATF7P17544 494 aaPredicted RBP14.45□□□□□ -0.1
THBS3-202ENST00000428962 IGBP1P78318 339 aa14.45□□□□□ -0.1
THBS3-202ENST00000428962 IRX5P78411 483 aaPredicted RBP14.45□□□□□ -0.1
THBS3-202ENST00000428962 TRIP13Q15645 432 aaPredicted RBP14.45□□□□□ -0.1
THBS3-202ENST00000428962 TNFAIP8L3Q5GJ75 292 aa14.45□□□□□ -0.1
THBS3-202ENST00000428962 ERMARDQ5T6L9 678 aa14.45□□□□□ -0.1
THBS3-202ENST00000428962 RELL1Q8IUW5 271 aa14.45□□□□□ -0.1
THBS3-202ENST00000428962 WDTC1Q8N5D0 677 aa14.45□□□□□ -0.1
THBS3-202ENST00000428962 CEP120Q8N960 986 aa14.45□□□□□ -0.1
THBS3-202ENST00000428962 IPO4Q8TEX9 1081 aaKnown RBP14.45□□□□□ -0.1
THBS3-202ENST00000428962 EMID1Q96A84 441 aaPredicted RBP14.45□□□□□ -0.1
THBS3-202ENST00000428962 ZNF668Q96K58 619 aaPredicted RBP14.45□□□□□ -0.1
THBS3-202ENST00000428962 XPO6Q96QU8 1125 aaKnown RBP14.45□□□□□ -0.1
THBS3-202ENST00000428962 RNPEPQ9H4A4 650 aa14.45□□□□□ -0.1
THBS3-202ENST00000428962 FAM124BQ9H5Z6 455 aaPredicted RBP14.45□□□□□ -0.1
THBS3-202ENST00000428962 MINDY3Q9H8M7 445 aa14.45□□□□□ -0.1
THBS3-202ENST00000428962 POLIQ9UNA4 740 aa14.45□□□□□ -0.1
THBS3-202ENST00000428962 AKT3Q9Y243 479 aa14.45□□□□□ -0.1
THBS3-202ENST00000428962 IVNS1ABPQ9Y6Y0 642 aa14.45□□□□□ -0.1
THBS3-202ENST00000428962 C5orf60A6NFR6 353 aa14.45□□□□□ -0.1
THBS3-202ENST00000428962 F8VP50 259 aa14.45□□□□□ -0.1
THBS3-202ENST00000428962 GPR25O00155 361 aa14.45□□□□□ -0.1
THBS3-202ENST00000428962 TRIM66O15016 1216 aa14.45□□□□□ -0.1
THBS3-202ENST00000428962 MEFVO15553 781 aaPredicted RBP14.45□□□□□ -0.1
THBS3-202ENST00000428962 ACSL3O95573 720 aa14.45□□□□□ -0.1
THBS3-202ENST00000428962 KRT7P08729 469 aa14.45□□□□□ -0.1
THBS3-202ENST00000428962 PSMA2P25787 234 aa14.45□□□□□ -0.1
THBS3-202ENST00000428962 KLRC2P26717 231 aa14.45□□□□□ -0.1
THBS3-202ENST00000428962 CHKAP35790 457 aa14.45□□□□□ -0.1
THBS3-202ENST00000428962 AUHQ13825 339 aaKnown RBP14.45□□□□□ -0.1
THBS3-202ENST00000428962 HADHQ16836 314 aaKnown RBP14.45□□□□□ -0.1
THBS3-202ENST00000428962 WDR72Q3MJ13 1102 aa14.45□□□□□ -0.1
THBS3-202ENST00000428962 KAZNQ674X7 775 aa14.45□□□□□ -0.1
THBS3-202ENST00000428962 DENND1BQ6P3S1 775 aa14.45□□□□□ -0.1
THBS3-202ENST00000428962 MFSD7Q6UXD7 560 aa14.45□□□□□ -0.1
THBS3-202ENST00000428962 TTC39CQ8N584 583 aa14.45□□□□□ -0.1
THBS3-202ENST00000428962 LINC01465Q8N7H1 131 aa14.45□□□□□ -0.1
THBS3-202ENST00000428962 C1orf127Q8N9H9 656 aa14.45□□□□□ -0.1
THBS3-202ENST00000428962 UHMK1Q8TAS1 419 aaKnown RBP14.45□□□□□ -0.1
THBS3-202ENST00000428962 FRMD8P1Q9BZ68 369 aaPredicted RBP14.45□□□□□ -0.1
THBS3-202ENST00000428962 PDZD7Q9H5P4 517 aa14.45□□□□□ -0.1
THBS3-202ENST00000428962 SYNCQ9H7C4 482 aa14.45□□□□□ -0.1
THBS3-202ENST00000428962 VRTNQ9H8Y1 702 aa14.45□□□□□ -0.1
THBS3-202ENST00000428962 EFCC1Q9HA90 598 aa14.45□□□□□ -0.1
THBS3-202ENST00000428962 IFT122Q9HBG6 1241 aa14.45□□□□□ -0.1
THBS3-202ENST00000428962 KLHL11Q9NVR0 708 aa14.45□□□□□ -0.1
THBS3-202ENST00000428962 SIX4Q9UIU6 781 aa14.45□□□□□ -0.1
THBS3-202ENST00000428962 DRG1Q9Y295 367 aaKnown RBP14.45□□□□□ -0.1
THBS3-202ENST00000428962 EFR3BQ9Y2G0 817 aa14.45□□□□□ -0.1
THBS3-202ENST00000428962 hCG_1818297A0A087WSY0 165 aa14.44□□□□□ -0.1
THBS3-202ENST00000428962 RBM47A0AV96 593 aaKnown RBP14.44□□□□□ -0.1
THBS3-202ENST00000428962 SIGLEC16A6NMB1 481 aa14.44□□□□□ -0.1
THBS3-202ENST00000428962 LACTBL1A8MY62 500 aa14.44□□□□□ -0.1
THBS3-202ENST00000428962 PI4K2BG5E9Z4 385 aa14.44□□□□□ -0.1
THBS3-202ENST00000428962 TCEA3O75764 348 aa14.44□□□□□ -0.1
THBS3-202ENST00000428962 KRT3P12035 628 aa14.44□□□□□ -0.1
THBS3-202ENST00000428962 CHN1P15882 459 aa14.44□□□□□ -0.1
THBS3-202ENST00000428962 SLCO1A2P46721 670 aa14.44□□□□□ -0.1
THBS3-202ENST00000428962 VPS41P49754 854 aa14.44□□□□□ -0.1
THBS3-202ENST00000428962 OGDHQ02218 1023 aa14.44□□□□□ -0.1
THBS3-202ENST00000428962 ZNF792Q3KQV3 632 aa14.44□□□□□ -0.1
THBS3-202ENST00000428962 PTPN20Q4JDL3 420 aa14.44□□□□□ -0.1
THBS3-202ENST00000428962 LDLRAD1Q5T700 205 aa14.44□□□□□ -0.1
THBS3-202ENST00000428962 CYP4A22Q5TCH4 519 aa14.44□□□□□ -0.1
THBS3-202ENST00000428962 JADE1Q6IE81 842 aa14.44□□□□□ -0.1
THBS3-202ENST00000428962 ZNF467Q7Z7K2 595 aaPredicted RBP14.44□□□□□ -0.1
THBS3-202ENST00000428962 TADA2BQ86TJ2 420 aa14.44□□□□□ -0.1
THBS3-202ENST00000428962 CDR2LQ86X02 465 aaPredicted RBP14.44□□□□□ -0.1
THBS3-202ENST00000428962 ZCCHC9Q8N567 271 aaKnown RBP14.44□□□□□ -0.1
THBS3-202ENST00000428962 OTUD6BQ8N6M0 293 aa14.44□□□□□ -0.1
THBS3-202ENST00000428962 CHMP6Q96FZ7 201 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms