RNA–Protein interactions for RNA: ENST00000428678.1

UPK3BP1-201, Transcript of uroplakin 3B pseudogene 1, humanhuman

BASIC

Gene UPK3BP1, Length 509 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BP1-201ENST00000428678 KCTD17Q8N5Z5 321 aa19.82■□□□□ 0.76
UPK3BP1-201ENST00000428678 LOXL4Q96JB6 756 aa19.82■□□□□ 0.76
UPK3BP1-201ENST00000428678 SLC46A2Q9BY10 475 aa19.82■□□□□ 0.76
UPK3BP1-201ENST00000428678 IL21Q9HBE4 155 aa19.82■□□□□ 0.76
UPK3BP1-201ENST00000428678 SLC8A2Q9UPR5 921 aa19.82■□□□□ 0.76
UPK3BP1-201ENST00000428678 TCHHQ07283 1943 aa19.81■□□□□ 0.76
UPK3BP1-201ENST00000428678 A0A0B4J269 797 aa19.81■□□□□ 0.76
UPK3BP1-201ENST00000428678 EPN2O95208 641 aa19.81■□□□□ 0.76
UPK3BP1-201ENST00000428678 SEC24BO95487 1268 aa19.81■□□□□ 0.76
UPK3BP1-201ENST00000428678 CYP11A1P05108 521 aa19.81■□□□□ 0.76
UPK3BP1-201ENST00000428678 ADRB2P07550 413 aa19.81■□□□□ 0.76
UPK3BP1-201ENST00000428678 ZNF806P0C7X5 589 aa19.81■□□□□ 0.76
UPK3BP1-201ENST00000428678 ATP2C1P98194 919 aaPredicted RBP19.81■□□□□ 0.76
UPK3BP1-201ENST00000428678 TMEM119Q4V9L6 283 aa19.81■□□□□ 0.76
UPK3BP1-201ENST00000428678 METTL23Q86XA0 190 aa19.81■□□□□ 0.76
UPK3BP1-201ENST00000428678 CD302Q8IX05 232 aa19.81■□□□□ 0.76
UPK3BP1-201ENST00000428678 MYCT1Q8N699 235 aa19.81■□□□□ 0.76
UPK3BP1-201ENST00000428678 REEP2Q9BRK0 252 aa19.81■□□□□ 0.76
UPK3BP1-201ENST00000428678 ZCWPW1Q9H0M4 648 aa19.81■□□□□ 0.76
UPK3BP1-201ENST00000428678 RXFP3Q9NSD7 469 aa19.81■□□□□ 0.76
UPK3BP1-201ENST00000428678 DSEQ9UL01 958 aa19.81■□□□□ 0.76
UPK3BP1-201ENST00000428678 ODF2LQ9ULJ1 636 aa19.81■□□□□ 0.76
UPK3BP1-201ENST00000428678 PIRO00625 290 aa19.8■□□□□ 0.76
UPK3BP1-201ENST00000428678 ATG13O75143 517 aa19.8■□□□□ 0.76
UPK3BP1-201ENST00000428678 FAM13AO94988 1023 aa19.8■□□□□ 0.76
UPK3BP1-201ENST00000428678 PIGRP01833 764 aa19.8■□□□□ 0.76
UPK3BP1-201ENST00000428678 AVPR1AP37288 418 aa19.8■□□□□ 0.76
UPK3BP1-201ENST00000428678 DHX8Q14562 1220 aaKnown RBP19.8■□□□□ 0.76
UPK3BP1-201ENST00000428678 RILPL1Q5EBL4 403 aa19.8■□□□□ 0.76
UPK3BP1-201ENST00000428678 TMEM196Q5HYL7 178 aa19.8■□□□□ 0.76
UPK3BP1-201ENST00000428678 N4BP2L1Q5TBK1 243 aaPredicted RBP19.8■□□□□ 0.76
UPK3BP1-201ENST00000428678 TRIM68Q6AZZ1 485 aa19.8■□□□□ 0.76
UPK3BP1-201ENST00000428678 FSTL4Q6MZW2 842 aa19.8■□□□□ 0.76
UPK3BP1-201ENST00000428678 GPBP1Q86WP2 473 aa19.8■□□□□ 0.76
UPK3BP1-201ENST00000428678 CMTM8Q8IZV2 173 aa19.8■□□□□ 0.76
UPK3BP1-201ENST00000428678 THEM5Q8N1Q8 247 aa19.8■□□□□ 0.76
UPK3BP1-201ENST00000428678 PYM1Q9BRP8 204 aaKnown RBP19.8■□□□□ 0.76
UPK3BP1-201ENST00000428678 EBF3Q9H4W6 596 aa19.8■□□□□ 0.76
UPK3BP1-201ENST00000428678 HPS4Q9NQG7 708 aa19.8■□□□□ 0.76
UPK3BP1-201ENST00000428678 ABI2Q9NYB9 513 aaPredicted RBP19.8■□□□□ 0.76
UPK3BP1-201ENST00000428678 CPSF3Q9UKF6 684 aaKnown RBP19.8■□□□□ 0.76
UPK3BP1-201ENST00000428678 DENND4CQ5VZ89 1909 aa19.8■□□□□ 0.76
UPK3BP1-201ENST00000428678 FAM208BQ5VWN6 2430 aa19.79■□□□□ 0.76
UPK3BP1-201ENST00000428678 CCDC163A0A0D9SF12 145 aa19.79■□□□□ 0.76
UPK3BP1-201ENST00000428678 ANO9A1A5B4 782 aa19.79■□□□□ 0.76
UPK3BP1-201ENST00000428678 CYB561D2O14569 222 aa19.79■□□□□ 0.76
UPK3BP1-201ENST00000428678 NEFLP07196 543 aa19.79■□□□□ 0.76
UPK3BP1-201ENST00000428678 NMT1P30419 496 aaKnown RBP19.79■□□□□ 0.76
UPK3BP1-201ENST00000428678 RAP1GAPP47736 663 aa19.79■□□□□ 0.76
UPK3BP1-201ENST00000428678 BFSP1Q12934 665 aa19.79■□□□□ 0.76
UPK3BP1-201ENST00000428678 RUNX3Q13761 415 aa19.79■□□□□ 0.76
UPK3BP1-201ENST00000428678 STPG1Q5TH74 334 aa19.79■□□□□ 0.76
UPK3BP1-201ENST00000428678 MAB21L3Q8N8X9 362 aa19.79■□□□□ 0.76
UPK3BP1-201ENST00000428678 SPPL2BQ8TCT7 592 aa19.79■□□□□ 0.76
UPK3BP1-201ENST00000428678 KCNN1Q92952 543 aa19.79■□□□□ 0.76
UPK3BP1-201ENST00000428678 FAM83CQ9BQN1 747 aa19.79■□□□□ 0.76
UPK3BP1-201ENST00000428678 SMOC1Q9H4F8 434 aa19.79■□□□□ 0.76
UPK3BP1-201ENST00000428678 ZMYM5Q9UJ78 669 aa19.79■□□□□ 0.76
UPK3BP1-201ENST00000428678 CCL26Q9Y258 94 aa19.79■□□□□ 0.76
UPK3BP1-201ENST00000428678 DERAQ9Y315 318 aa19.79■□□□□ 0.76
UPK3BP1-201ENST00000428678 EML5Q05BV3 1969 aa19.79■□□□□ 0.76
UPK3BP1-201ENST00000428678 RNF40O75150 1001 aa19.78■□□□□ 0.76
UPK3BP1-201ENST00000428678 HAPLN1P10915 354 aaPredicted RBP19.78■□□□□ 0.76
UPK3BP1-201ENST00000428678 SCP2P22307 547 aa19.78■□□□□ 0.76
UPK3BP1-201ENST00000428678 PMLP29590 882 aa19.78■□□□□ 0.76
UPK3BP1-201ENST00000428678 ACOT2P49753 483 aa19.78■□□□□ 0.76
UPK3BP1-201ENST00000428678 TAF6P49848 677 aa19.78■□□□□ 0.76
UPK3BP1-201ENST00000428678 SMARCB1Q12824 385 aa19.78■□□□□ 0.76
UPK3BP1-201ENST00000428678 SLC39A4Q6P5W5 647 aa19.78■□□□□ 0.76
UPK3BP1-201ENST00000428678 LRRTM3Q86VH5 581 aa19.78■□□□□ 0.76
UPK3BP1-201ENST00000428678 C2orf15Q8WU43 125 aaKnown RBP19.78■□□□□ 0.76
UPK3BP1-201ENST00000428678 USP13Q92995 863 aaPredicted RBP19.78■□□□□ 0.76
UPK3BP1-201ENST00000428678 ZHX3Q9H4I2 956 aa19.78■□□□□ 0.76
UPK3BP1-201ENST00000428678 PARVGQ9HBI0 331 aa19.78■□□□□ 0.76
UPK3BP1-201ENST00000428678 POLR3BQ9NW08 1133 aaPredicted RBP19.78■□□□□ 0.76
UPK3BP1-201ENST00000428678 OTOL1A6NHN0 477 aaPredicted RBP19.77■□□□□ 0.76
UPK3BP1-201ENST00000428678 TRDMT1O14717 391 aaKnown RBP19.77■□□□□ 0.76
UPK3BP1-201ENST00000428678 TM4SF5O14894 197 aa19.77■□□□□ 0.76
UPK3BP1-201ENST00000428678 EGFP01133 1207 aa19.77■□□□□ 0.76
UPK3BP1-201ENST00000428678 KRT18P05783 430 aaKnown RBP19.77■□□□□ 0.76
UPK3BP1-201ENST00000428678 ARSAP15289 507 aa19.77■□□□□ 0.76
UPK3BP1-201ENST00000428678 MPLP40238 635 aa19.77■□□□□ 0.76
UPK3BP1-201ENST00000428678 WSCD1Q658N2 575 aa19.77■□□□□ 0.76
UPK3BP1-201ENST00000428678 CC2D1AQ6P1N0 951 aaPredicted RBP19.77■□□□□ 0.76
UPK3BP1-201ENST00000428678 TMEM150AQ86TG1 271 aa19.77■□□□□ 0.76
UPK3BP1-201ENST00000428678 CHFRQ96EP1 664 aa19.77■□□□□ 0.76
UPK3BP1-201ENST00000428678 HHIPQ96QV1 700 aa19.77■□□□□ 0.76
UPK3BP1-201ENST00000428678 TDP1Q9NUW8 608 aa19.77■□□□□ 0.76
UPK3BP1-201ENST00000428678 KIF3AQ9Y496 699 aa19.77■□□□□ 0.76
UPK3BP1-201ENST00000428678 PCDHGA5Q9Y5G8 931 aa19.77■□□□□ 0.76
UPK3BP1-201ENST00000428678 IGF2RP11717 2491 aa19.76■□□□□ 0.75
UPK3BP1-201ENST00000428678 OBSL1O75147 1896 aa19.76■□□□□ 0.75
UPK3BP1-201ENST00000428678 TRAK2O60296 914 aa19.76■□□□□ 0.75
UPK3BP1-201ENST00000428678 AKAP3O75969 853 aa19.76■□□□□ 0.75
UPK3BP1-201ENST00000428678 DDX6P26196 483 aaKnown RBP eCLIP19.76■□□□□ 0.75
UPK3BP1-201ENST00000428678 ZNF131P52739 623 aa19.76■□□□□ 0.75
UPK3BP1-201ENST00000428678 NLRP12P59046 1061 aa19.76■□□□□ 0.75
UPK3BP1-201ENST00000428678 AMPD2Q01433 879 aa19.76■□□□□ 0.75
UPK3BP1-201ENST00000428678 PLA2G2CQ5R387 149 aa19.76■□□□□ 0.75
UPK3BP1-201ENST00000428678 TXNDC8Q6A555 127 aa19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms