RNA–Protein interactions for RNA: ENST00000428599.6

CTNND1-208, Transcript of catenin delta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNND1, Length 6,016 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-208ENST00000428599 GRAMD1AQ96CP6 724 aa9.34□□□□□ -0.91
CTNND1-208ENST00000428599 TNS2Q63HR2 1409 aa9.34□□□□□ -0.91
CTNND1-208ENST00000428599 C17orf102A2RUQ5 167 aa9.33□□□□□ -0.92
CTNND1-208ENST00000428599 PRR23AA6NEV1 266 aa9.33□□□□□ -0.92
CTNND1-208ENST00000428599 EVPLLA8MZ36 301 aa9.33□□□□□ -0.92
CTNND1-208ENST00000428599 F8W810 466 aa9.33□□□□□ -0.92
CTNND1-208ENST00000428599 SRGNP10124 158 aa9.33□□□□□ -0.92
CTNND1-208ENST00000428599 PDK1Q15118 436 aa9.33□□□□□ -0.92
CTNND1-208ENST00000428599 PCYOX1LQ8NBM8 494 aa9.33□□□□□ -0.92
CTNND1-208ENST00000428599 RFFLQ8WZ73 363 aa9.33□□□□□ -0.92
CTNND1-208ENST00000428599 SENP7Q9BQF6 1050 aa9.33□□□□□ -0.92
CTNND1-208ENST00000428599 GEMIN8Q9NWZ8 242 aaKnown RBP9.33□□□□□ -0.92
CTNND1-208ENST00000428599 MYL2P10916 166 aa9.33□□□□□ -0.92
CTNND1-208ENST00000428599 PYGMP11217 842 aa9.33□□□□□ -0.92
CTNND1-208ENST00000428599 ODC1P11926 461 aa9.33□□□□□ -0.92
CTNND1-208ENST00000428599 HPGDP15428 266 aa9.33□□□□□ -0.92
CTNND1-208ENST00000428599 CHRM3P20309 590 aa9.33□□□□□ -0.92
CTNND1-208ENST00000428599 ATXN3P54252 364 aaPredicted RBP9.33□□□□□ -0.92
CTNND1-208ENST00000428599 MAGOHP61326 146 aaKnown RBP9.33□□□□□ -0.92
CTNND1-208ENST00000428599 NCAPHQ15003 741 aa9.33□□□□□ -0.92
CTNND1-208ENST00000428599 USE1Q9NZ43 259 aa9.33□□□□□ -0.92
CTNND1-208ENST00000428599 NAGPAQ9UK23 515 aa9.33□□□□□ -0.92
CTNND1-208ENST00000428599 ARHGEF28Q8N1W1 1705 aaKnown RBP9.33□□□□□ -0.92
CTNND1-208ENST00000428599 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.33□□□□□ -0.92
CTNND1-208ENST00000428599 SYNCRIPO60506 623 aaKnown RBP9.33□□□□□ -0.92
CTNND1-208ENST00000428599 SEC24DO94855 1032 aaPredicted RBP9.33□□□□□ -0.92
CTNND1-208ENST00000428599 PGK2P07205 417 aa9.33□□□□□ -0.92
CTNND1-208ENST00000428599 SLC2A3P11169 496 aa9.33□□□□□ -0.92
CTNND1-208ENST00000428599 KRT20P35900 424 aa9.33□□□□□ -0.92
CTNND1-208ENST00000428599 PNPLA4P41247 253 aa9.33□□□□□ -0.92
CTNND1-208ENST00000428599 PPP2R2AP63151 447 aa9.33□□□□□ -0.92
CTNND1-208ENST00000428599 ZNF177Q13360 481 aaPredicted RBP9.33□□□□□ -0.92
CTNND1-208ENST00000428599 STAT4Q14765 748 aa9.33□□□□□ -0.92
CTNND1-208ENST00000428599 LMBRD2Q68DH5 695 aaPredicted RBP9.33□□□□□ -0.92
CTNND1-208ENST00000428599 C1orf54Q8WWF1 131 aa9.33□□□□□ -0.92
CTNND1-208ENST00000428599 MAGEB10Q96LZ2 347 aaPredicted RBP9.33□□□□□ -0.92
CTNND1-208ENST00000428599 TASP1Q9H6P5 420 aa9.33□□□□□ -0.92
CTNND1-208ENST00000428599 ADGRA2Q96PE1 1338 aa9.33□□□□□ -0.92
CTNND1-208ENST00000428599 H0YC42 278 aa9.33□□□□□ -0.92
CTNND1-208ENST00000428599 SCP2P22307 547 aa9.33□□□□□ -0.92
CTNND1-208ENST00000428599 SLC16A1P53985 500 aa9.33□□□□□ -0.92
CTNND1-208ENST00000428599 SEMA3FQ13275 785 aa9.33□□□□□ -0.92
CTNND1-208ENST00000428599 NOTUMQ6P988 496 aa9.33□□□□□ -0.92
CTNND1-208ENST00000428599 FMR1NBQ8N0W7 255 aaPredicted RBP9.33□□□□□ -0.92
CTNND1-208ENST00000428599 ANKRD49Q8WVL7 239 aa9.33□□□□□ -0.92
CTNND1-208ENST00000428599 JADE3Q92613 823 aa9.33□□□□□ -0.92
CTNND1-208ENST00000428599 PRMT6Q96LA8 375 aaPredicted RBP9.33□□□□□ -0.92
CTNND1-208ENST00000428599 RBBP8Q99708 897 aa9.33□□□□□ -0.92
CTNND1-208ENST00000428599 PHF20Q9BVI0 1012 aa9.33□□□□□ -0.92
CTNND1-208ENST00000428599 UVRAGQ9P2Y5 699 aa9.33□□□□□ -0.92
CTNND1-208ENST00000428599 VWDEQ8N2E2 1590 aa9.33□□□□□ -0.92
CTNND1-208ENST00000428599 CAND2O75155 1236 aa9.33□□□□□ -0.92
CTNND1-208ENST00000428599 RHOBTB1O94844 696 aa9.33□□□□□ -0.92
CTNND1-208ENST00000428599 TRIM49P0CI25 452 aa9.33□□□□□ -0.92
CTNND1-208ENST00000428599 TRIM49CP0CI26 452 aa9.33□□□□□ -0.92
CTNND1-208ENST00000428599 ETFBP38117 255 aa9.33□□□□□ -0.92
CTNND1-208ENST00000428599 GNASQ5JWF2 1037 aa9.33□□□□□ -0.92
CTNND1-208ENST00000428599 MMGT1Q8N4V1 131 aa9.33□□□□□ -0.92
CTNND1-208ENST00000428599 ATL2Q8NHH9 583 aa9.33□□□□□ -0.92
CTNND1-208ENST00000428599 ZKSCAN4Q969J2 545 aaPredicted RBP9.33□□□□□ -0.92
CTNND1-208ENST00000428599 TMEM143Q96AN5 459 aa9.33□□□□□ -0.92
CTNND1-208ENST00000428599 ARHGEF26Q96DR7 871 aa9.33□□□□□ -0.92
CTNND1-208ENST00000428599 PPP1R36Q96LQ0 422 aa9.33□□□□□ -0.92
CTNND1-208ENST00000428599 NT5C1AQ9BXI3 368 aa9.33□□□□□ -0.92
CTNND1-208ENST00000428599 EMILIN2Q9BXX0 1053 aa9.33□□□□□ -0.92
CTNND1-208ENST00000428599 SCUBE2Q9NQ36 999 aa9.33□□□□□ -0.92
CTNND1-208ENST00000428599 HSPBP1Q9NZL4 362 aa9.33□□□□□ -0.92
CTNND1-208ENST00000428599 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.33□□□□□ -0.92
CTNND1-208ENST00000428599 POLRMTO00411 1230 aaKnown RBP9.32□□□□□ -0.92
CTNND1-208ENST00000428599 C2CD2LO14523 706 aa9.32□□□□□ -0.92
CTNND1-208ENST00000428599 GRK3P35626 688 aa9.32□□□□□ -0.92
CTNND1-208ENST00000428599 PLA2G4AP47712 749 aa9.32□□□□□ -0.92
CTNND1-208ENST00000428599 MRPS15P82914 257 aaKnown RBP9.32□□□□□ -0.92
CTNND1-208ENST00000428599 TMEM62Q0P6H9 643 aa9.32□□□□□ -0.92
CTNND1-208ENST00000428599 CAMK2GQ13555 558 aaPredicted RBP9.32□□□□□ -0.92
CTNND1-208ENST00000428599 EMC2Q15006 297 aa9.32□□□□□ -0.92
CTNND1-208ENST00000428599 TRIP4Q15650 581 aaPredicted RBP9.32□□□□□ -0.92
CTNND1-208ENST00000428599 TRIM71Q2Q1W2 868 aaKnown RBP9.32□□□□□ -0.92
CTNND1-208ENST00000428599 NBPF9Q3BBW0 867 aa9.32□□□□□ -0.92
CTNND1-208ENST00000428599 USP39Q53GS9 565 aaKnown RBP9.32□□□□□ -0.92
CTNND1-208ENST00000428599 EFHC1Q5JVL4 640 aa9.32□□□□□ -0.92
CTNND1-208ENST00000428599 C16orf89Q6UX73 402 aa9.32□□□□□ -0.92
CTNND1-208ENST00000428599 BTNL9Q6UXG8 535 aa9.32□□□□□ -0.92
CTNND1-208ENST00000428599 MRPS31Q92665 395 aaKnown RBP9.32□□□□□ -0.92
CTNND1-208ENST00000428599 NFKBIZQ9BYH8 718 aa9.32□□□□□ -0.92
CTNND1-208ENST00000428599 C20orf96Q9NUD7 363 aaPredicted RBP9.32□□□□□ -0.92
CTNND1-208ENST00000428599 SYBUQ9NX95 663 aa9.32□□□□□ -0.92
CTNND1-208ENST00000428599 CDYLQ9Y232 598 aa9.32□□□□□ -0.92
CTNND1-208ENST00000428599 SLIT1O75093 1534 aa9.32□□□□□ -0.92
CTNND1-208ENST00000428599 CYP26A1O43174 497 aa9.32□□□□□ -0.92
CTNND1-208ENST00000428599 MTSS1O43312 755 aa9.32□□□□□ -0.92
CTNND1-208ENST00000428599 ADCY3O60266 1144 aa9.32□□□□□ -0.92
CTNND1-208ENST00000428599 RASSF9O75901 435 aa9.32□□□□□ -0.92
CTNND1-208ENST00000428599 EIF2S1P05198 315 aaKnown RBP9.32□□□□□ -0.92
CTNND1-208ENST00000428599 ALDH18A1P54886 795 aaKnown RBP9.32□□□□□ -0.92
CTNND1-208ENST00000428599 KCNK10P57789 538 aa9.32□□□□□ -0.92
CTNND1-208ENST00000428599 PIGHQ14442 188 aaPredicted RBP9.32□□□□□ -0.92
CTNND1-208ENST00000428599 AASDHQ4L235 1098 aaPredicted RBP9.32□□□□□ -0.92
CTNND1-208ENST00000428599 SKA1Q96BD8 255 aa9.32□□□□□ -0.92
CTNND1-208ENST00000428599 VWA5AO00534 786 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms