RNA–Protein interactions for RNA: ENST00000428307.6

HDAC9-210, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,359 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-210ENST00000428307 UBA3Q8TBC4 463 aa11.02□□□□□ -0.65
HDAC9-210ENST00000428307 PIK3R5Q8WYR1 880 aa11.02□□□□□ -0.65
HDAC9-210ENST00000428307 ACSF2Q96CM8 615 aaPredicted RBP11.02□□□□□ -0.65
HDAC9-210ENST00000428307 CPXM1Q96SM3 734 aa11.02□□□□□ -0.65
HDAC9-210ENST00000428307 FAM114A2Q9NRY5 505 aa11.02□□□□□ -0.65
HDAC9-210ENST00000428307 TUBGCP4Q9UGJ1 667 aa11.02□□□□□ -0.65
HDAC9-210ENST00000428307 PCYOX1Q9UHG3 505 aa11.02□□□□□ -0.65
HDAC9-210ENST00000428307 IP6K2Q9UHH9 426 aa11.02□□□□□ -0.65
HDAC9-210ENST00000428307 SNX9Q9Y5X1 595 aa11.02□□□□□ -0.65
HDAC9-210ENST00000428307 HAS3O00219 553 aa11.02□□□□□ -0.65
HDAC9-210ENST00000428307 PIK3R2O00459 728 aa11.02□□□□□ -0.65
HDAC9-210ENST00000428307 MYCNP04198 464 aaPredicted RBP11.02□□□□□ -0.65
HDAC9-210ENST00000428307 PAEPP09466 180 aa11.02□□□□□ -0.65
HDAC9-210ENST00000428307 CDH5P33151 784 aaPredicted RBP11.02□□□□□ -0.65
HDAC9-210ENST00000428307 RFC1P35251 1148 aaPredicted RBP11.02□□□□□ -0.65
HDAC9-210ENST00000428307 GNASQ5JWF2 1037 aa11.02□□□□□ -0.65
HDAC9-210ENST00000428307 ANKS1BQ7Z6G8 1248 aa11.02□□□□□ -0.65
HDAC9-210ENST00000428307 EIF1ADQ8N9N8 165 aaKnown RBP11.02□□□□□ -0.65
HDAC9-210ENST00000428307 SOCS4Q8WXH5 440 aa11.02□□□□□ -0.65
HDAC9-210ENST00000428307 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.02□□□□□ -0.65
HDAC9-210ENST00000428307 ARL8AQ96BM9 186 aa11.02□□□□□ -0.65
HDAC9-210ENST00000428307 RNF39Q9H2S5 420 aa11.02□□□□□ -0.65
HDAC9-210ENST00000428307 VRTNQ9H8Y1 702 aa11.02□□□□□ -0.65
HDAC9-210ENST00000428307 CHST7Q9NS84 486 aa11.02□□□□□ -0.65
HDAC9-210ENST00000428307 RASAL2Q9UJF2 1139 aa11.02□□□□□ -0.65
HDAC9-210ENST00000428307 TCRBV5S1A1TA0A578 114 aa11.01□□□□□ -0.65
HDAC9-210ENST00000428307 C17orf102A2RUQ5 167 aa11.01□□□□□ -0.65
HDAC9-210ENST00000428307 FAM187AA6NFU0 413 aa11.01□□□□□ -0.65
HDAC9-210ENST00000428307 FAM155AB1AL88 458 aaPredicted RBP11.01□□□□□ -0.65
HDAC9-210ENST00000428307 M0QYV0 167 aa11.01□□□□□ -0.65
HDAC9-210ENST00000428307 RECQL4O94761 1208 aa11.01□□□□□ -0.65
HDAC9-210ENST00000428307 MICAL2O94851 1124 aa11.01□□□□□ -0.65
HDAC9-210ENST00000428307 KRT3P12035 628 aa11.01□□□□□ -0.65
HDAC9-210ENST00000428307 HSD17B3P37058 310 aa11.01□□□□□ -0.65
HDAC9-210ENST00000428307 HSPA9P38646 679 aaKnown RBP11.01□□□□□ -0.65
HDAC9-210ENST00000428307 LMAN1P49257 510 aa11.01□□□□□ -0.65
HDAC9-210ENST00000428307 PSMC1P62191 440 aaKnown RBP11.01□□□□□ -0.65
HDAC9-210ENST00000428307 PURAQ00577 322 aaKnown RBP11.01□□□□□ -0.65
HDAC9-210ENST00000428307 DHX9Q08211 1270 aaKnown RBP11.01□□□□□ -0.65
HDAC9-210ENST00000428307 MYO1EQ12965 1108 aa11.01□□□□□ -0.65
HDAC9-210ENST00000428307 KCTD16Q68DU8 428 aa11.01□□□□□ -0.65
HDAC9-210ENST00000428307 TXNRD3NBQ6F5E7 133 aa11.01□□□□□ -0.65
HDAC9-210ENST00000428307 MREGQ8N565 214 aa11.01□□□□□ -0.65
HDAC9-210ENST00000428307 EMC1Q8N766 993 aa11.01□□□□□ -0.65
HDAC9-210ENST00000428307 OR2W6PQ8NHA6 318 aa11.01□□□□□ -0.65
HDAC9-210ENST00000428307 LHX5Q9H2C1 402 aa11.01□□□□□ -0.65
HDAC9-210ENST00000428307 CYP3A43Q9HB55 503 aa11.01□□□□□ -0.65
HDAC9-210ENST00000428307 BARX2Q9UMQ3 279 aaPredicted RBP11.01□□□□□ -0.65
HDAC9-210ENST00000428307 R3HDM2Q9Y2K5 976 aaKnown RBP11.01□□□□□ -0.65
HDAC9-210ENST00000428307 KAT6AQ92794 2004 aa11.01□□□□□ -0.65
HDAC9-210ENST00000428307 PSTPIP1O43586 416 aa11.01□□□□□ -0.65
HDAC9-210ENST00000428307 PGK1P00558 417 aa11.01□□□□□ -0.65
HDAC9-210ENST00000428307 KRT10P13645 584 aa11.01□□□□□ -0.65
HDAC9-210ENST00000428307 AKR1A1P14550 325 aa11.01□□□□□ -0.65
HDAC9-210ENST00000428307 DMTNQ08495 405 aa11.01□□□□□ -0.65
HDAC9-210ENST00000428307 CYP1B1Q16678 543 aa11.01□□□□□ -0.65
HDAC9-210ENST00000428307 KAZNQ674X7 775 aa11.01□□□□□ -0.65
HDAC9-210ENST00000428307 CXCL17Q6UXB2 119 aa11.01□□□□□ -0.65
HDAC9-210ENST00000428307 SESTD1Q86VW0 696 aa11.01□□□□□ -0.65
HDAC9-210ENST00000428307 CD302Q8IX05 232 aa11.01□□□□□ -0.65
HDAC9-210ENST00000428307 C3orf20Q8ND61 904 aa11.01□□□□□ -0.65
HDAC9-210ENST00000428307 TRPV1Q8NER1 839 aa11.01□□□□□ -0.65
HDAC9-210ENST00000428307 JOSD2Q8TAC2 188 aa11.01□□□□□ -0.65
HDAC9-210ENST00000428307 FBXO25Q8TCJ0 367 aa11.01□□□□□ -0.65
HDAC9-210ENST00000428307 UBLCP1Q8WVY7 318 aaPredicted RBP11.01□□□□□ -0.65
HDAC9-210ENST00000428307 SNX27Q96L92 541 aa11.01□□□□□ -0.65
HDAC9-210ENST00000428307 FMO2Q99518 471 aa11.01□□□□□ -0.65
HDAC9-210ENST00000428307 LRRC19Q9H756 370 aa11.01□□□□□ -0.65
HDAC9-210ENST00000428307 PLEKHA5Q9HAU0 1116 aa11.01□□□□□ -0.65
HDAC9-210ENST00000428307 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.01□□□□□ -0.65
HDAC9-210ENST00000428307 PARP2Q9UGN5 583 aa11.01□□□□□ -0.65
HDAC9-210ENST00000428307 PLAAQ9Y263 795 aa11.01□□□□□ -0.65
HDAC9-210ENST00000428307 ATP8A1Q9Y2Q0 1164 aa11.01□□□□□ -0.65
HDAC9-210ENST00000428307 GOLGA6CA6NDK9 693 aa11□□□□□ -0.65
HDAC9-210ENST00000428307 PODXLO00592 558 aa11□□□□□ -0.65
HDAC9-210ENST00000428307 OPA1O60313 960 aa11□□□□□ -0.65
HDAC9-210ENST00000428307 ERBB2P04626 1255 aa11□□□□□ -0.65
HDAC9-210ENST00000428307 GOLGA6DP0CG33 693 aa11□□□□□ -0.65
HDAC9-210ENST00000428307 PSMC4P43686 418 aa11□□□□□ -0.65
HDAC9-210ENST00000428307 RPL21P46778 160 aaKnown RBP11□□□□□ -0.65
HDAC9-210ENST00000428307 ADCY2Q08462 1091 aa11□□□□□ -0.65
HDAC9-210ENST00000428307 IRF5Q13568 498 aa11□□□□□ -0.65
HDAC9-210ENST00000428307 PPP1R7Q15435 360 aa11□□□□□ -0.65
HDAC9-210ENST00000428307 TRIP13Q15645 432 aaPredicted RBP11□□□□□ -0.65
HDAC9-210ENST00000428307 UAP1Q16222 522 aaPredicted RBP11□□□□□ -0.65
HDAC9-210ENST00000428307 DNAJC21Q5F1R6 531 aaKnown RBP11□□□□□ -0.65
HDAC9-210ENST00000428307 PPP1R15BQ5SWA1 713 aa11□□□□□ -0.65
HDAC9-210ENST00000428307 APBB1IPQ7Z5R6 666 aaPredicted RBP11□□□□□ -0.65
HDAC9-210ENST00000428307 NT5DC4Q86YG4 428 aa11□□□□□ -0.65
HDAC9-210ENST00000428307 KATNAL2Q8IYT4 538 aa11□□□□□ -0.65
HDAC9-210ENST00000428307 LRRC45Q96CN5 670 aa11□□□□□ -0.65
HDAC9-210ENST00000428307 FAXDC2Q96IV6 333 aa11□□□□□ -0.65
HDAC9-210ENST00000428307 SH3GL2Q99962 352 aa11□□□□□ -0.65
HDAC9-210ENST00000428307 MRPL45Q9BRJ2 306 aaKnown RBP11□□□□□ -0.65
HDAC9-210ENST00000428307 OSBPL8Q9BZF1 889 aa11□□□□□ -0.65
HDAC9-210ENST00000428307 GOLGA6AQ9NYA3 693 aa11□□□□□ -0.65
HDAC9-210ENST00000428307 STRIP2Q9ULQ0 834 aa11□□□□□ -0.65
HDAC9-210ENST00000428307 GABRQQ9UN88 632 aa11□□□□□ -0.65
HDAC9-210ENST00000428307 WDR3Q9UNX4 943 aaKnown RBP eCLIP11□□□□□ -0.65
HDAC9-210ENST00000428307 ERICH4A6NGS2 130 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms