RNA–Protein interactions for RNA: ENST00000427526.6

LIG1-202, Transcript of DNA ligase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIG1, Length 3,027 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-202ENST00000427526 ZNF252P-AS1Q0IIN9 211 aa15.09■□□□□ 0.01
LIG1-202ENST00000427526 GSTA5Q7RTV2 222 aa15.09■□□□□ 0.01
LIG1-202ENST00000427526 RIBC1Q8N443 379 aaPredicted RBP15.09■□□□□ 0.01
LIG1-202ENST00000427526 FITM2Q8N6M3 262 aa15.09■□□□□ 0.01
LIG1-202ENST00000427526 UBR7Q8N806 425 aa15.09■□□□□ 0.01
LIG1-202ENST00000427526 L3MBTL3Q96JM7 780 aaPredicted RBP15.09■□□□□ 0.01
LIG1-202ENST00000427526 KCNH4Q9UQ05 1017 aa15.09■□□□□ 0.01
LIG1-202ENST00000427526 SIP14410 1827 aa15.09■□□□□ 0.01
LIG1-202ENST00000427526 K7ERI5 159 aa15.09■□□□□ 0.01
LIG1-202ENST00000427526 TAC1P20366 129 aa15.09■□□□□ 0.01
LIG1-202ENST00000427526 EDNRBP24530 442 aa15.09■□□□□ 0.01
LIG1-202ENST00000427526 GJC1P36383 396 aa15.09■□□□□ 0.01
LIG1-202ENST00000427526 CEP128Q6ZU80 1094 aa15.09■□□□□ 0.01
LIG1-202ENST00000427526 CEP57Q86XR8 500 aa15.09■□□□□ 0.01
LIG1-202ENST00000427526 TCP11Q8WWU5 503 aa15.09■□□□□ 0.01
LIG1-202ENST00000427526 PLCD4Q9BRC7 762 aa15.09■□□□□ 0.01
LIG1-202ENST00000427526 TARS2Q9BW92 718 aaKnown RBP15.09■□□□□ 0.01
LIG1-202ENST00000427526 GSTTP1A0A1W2PQM5 241 aa15.09■□□□□ 0.01
LIG1-202ENST00000427526 PI4K2BG5E9Z4 385 aa15.09■□□□□ 0.01
LIG1-202ENST00000427526 DNALI1O14645 258 aaPredicted RBP15.09■□□□□ 0.01
LIG1-202ENST00000427526 NQO1P15559 274 aaKnown RBP15.09■□□□□ 0.01
LIG1-202ENST00000427526 FOXN2P32314 431 aa15.09■□□□□ 0.01
LIG1-202ENST00000427526 SSR1P43307 286 aaKnown RBP15.09■□□□□ 0.01
LIG1-202ENST00000427526 COPS2P61201 443 aa15.09■□□□□ 0.01
LIG1-202ENST00000427526 KCNJ2P63252 427 aa15.09■□□□□ 0.01
LIG1-202ENST00000427526 MGAT5Q09328 741 aa15.09■□□□□ 0.01
LIG1-202ENST00000427526 MTFR1Q15390 333 aa15.09■□□□□ 0.01
LIG1-202ENST00000427526 LY6KQ17RY6 165 aa15.09■□□□□ 0.01
LIG1-202ENST00000427526 PPP1R21Q6ZMI0 780 aa15.09■□□□□ 0.01
LIG1-202ENST00000427526 CCHCR1Q8TD31 782 aa15.09■□□□□ 0.01
LIG1-202ENST00000427526 PCYT2Q99447 389 aa15.09■□□□□ 0.01
LIG1-202ENST00000427526 MSTO1Q9BUK6 570 aa15.09■□□□□ 0.01
LIG1-202ENST00000427526 ECT2Q9H8V3 914 aa15.09■□□□□ 0.01
LIG1-202ENST00000427526 RXFP1Q9HBX9 757 aa15.09■□□□□ 0.01
LIG1-202ENST00000427526 KLHL11Q9NVR0 708 aa15.09■□□□□ 0.01
LIG1-202ENST00000427526 NKIRAS1Q9NYS0 192 aa15.09■□□□□ 0.01
LIG1-202ENST00000427526 SH3BP1Q9Y3L3 701 aa15.09■□□□□ 0.01
LIG1-202ENST00000427526 RASA4BC9J798 803 aa15.08■□□□□ 0
LIG1-202ENST00000427526 RASA4O43374 803 aa15.08■□□□□ 0
LIG1-202ENST00000427526 FARP2O94887 1054 aaPredicted RBP15.08■□□□□ 0
LIG1-202ENST00000427526 GJA5P36382 358 aa15.08■□□□□ 0
LIG1-202ENST00000427526 WDR4P57081 412 aaKnown RBP15.08■□□□□ 0
LIG1-202ENST00000427526 PPIL2Q13356 520 aa15.08■□□□□ 0
LIG1-202ENST00000427526 LRRC38Q5VT99 294 aa15.08■□□□□ 0
LIG1-202ENST00000427526 MFSD7Q6UXD7 560 aa15.08■□□□□ 0
LIG1-202ENST00000427526 TDRPQ86YL5 185 aa15.08■□□□□ 0
LIG1-202ENST00000427526 ALLCQ8N6M5 410 aa15.08■□□□□ 0
LIG1-202ENST00000427526 ZC3H15Q8WU90 426 aaKnown RBP15.08■□□□□ 0
LIG1-202ENST00000427526 RBM41Q96IZ5 413 aaKnown RBP15.08■□□□□ 0
LIG1-202ENST00000427526 PAPPA2Q9BXP8 1791 aa15.08■□□□□ 0
LIG1-202ENST00000427526 ZSCAN5DPP0CG00 497 aa15.08■□□□□ 0
LIG1-202ENST00000427526 NCOA4Q13772 614 aa15.08■□□□□ 0
LIG1-202ENST00000427526 WDR78Q5VTH9 848 aa15.08■□□□□ 0
LIG1-202ENST00000427526 CYP4F22Q6NT55 531 aa15.08■□□□□ 0
LIG1-202ENST00000427526 TRABD2AQ86V40 505 aa15.08■□□□□ 0
LIG1-202ENST00000427526 RMDN2Q96LZ7 410 aa15.08■□□□□ 0
LIG1-202ENST00000427526 CFAP57Q96MR6 1250 aa15.08■□□□□ 0
LIG1-202ENST00000427526 BAIAP2L1Q9UHR4 511 aa15.08■□□□□ 0
LIG1-202ENST00000427526 DRG1Q9Y295 367 aaKnown RBP15.08■□□□□ 0
LIG1-202ENST00000427526 IVNS1ABPQ9Y6Y0 642 aa15.08■□□□□ 0
LIG1-202ENST00000427526 MYH9P35579 1960 aaKnown RBP15.07■□□□□ 0
LIG1-202ENST00000427526 FAM47DPA6NHR8 397 aa15.07■□□□□ 0
LIG1-202ENST00000427526 TJP3O95049 919 aa15.07■□□□□ 0
LIG1-202ENST00000427526 CST3P01034 146 aaPredicted RBP15.07■□□□□ 0
LIG1-202ENST00000427526 OATP04181 439 aa15.07■□□□□ 0
LIG1-202ENST00000427526 ALADP13716 330 aa15.07■□□□□ 0
LIG1-202ENST00000427526 CETN2P41208 172 aa15.07■□□□□ 0
LIG1-202ENST00000427526 MCL1Q07820 350 aa15.07■□□□□ 0
LIG1-202ENST00000427526 ADCY1Q08828 1119 aa15.07■□□□□ 0
LIG1-202ENST00000427526 ACVR2BQ13705 512 aa15.07■□□□□ 0
LIG1-202ENST00000427526 NEDD9Q14511 834 aa15.07■□□□□ 0
LIG1-202ENST00000427526 ZKSCAN8Q15776 578 aaPredicted RBP15.07■□□□□ 0
LIG1-202ENST00000427526 KAZNQ674X7 775 aa15.07■□□□□ 0
LIG1-202ENST00000427526 RNF43Q68DV7 783 aa15.07■□□□□ 0
LIG1-202ENST00000427526 GPAT2Q6NUI2 795 aa15.07■□□□□ 0
LIG1-202ENST00000427526 ASRGL1Q7L266 308 aa15.07■□□□□ 0
LIG1-202ENST00000427526 DEPTORQ8TB45 409 aa15.07■□□□□ 0
LIG1-202ENST00000427526 DENND1AQ8TEH3 1009 aa15.07■□□□□ 0
LIG1-202ENST00000427526 SAYSD1Q9NPB0 183 aa15.07■□□□□ 0
LIG1-202ENST00000427526 LRRIQ4A6NIV6 560 aa15.07■□□□□ 0
LIG1-202ENST00000427526 F8VP50 259 aa15.07■□□□□ 0
LIG1-202ENST00000427526 SOCS7O14512 581 aa15.07■□□□□ 0
LIG1-202ENST00000427526 MAGEB2O15479 319 aa15.07■□□□□ 0
LIG1-202ENST00000427526 ARIH2O95376 493 aa15.07■□□□□ 0
LIG1-202ENST00000427526 ASMTLO95671 621 aa15.07■□□□□ 0
LIG1-202ENST00000427526 PNMA8AQ86V59 439 aaPredicted RBP15.07■□□□□ 0
LIG1-202ENST00000427526 ANKLE1Q8NAG6 615 aa15.07■□□□□ 0
LIG1-202ENST00000427526 GRAMD1AQ96CP6 724 aa15.07■□□□□ 0
LIG1-202ENST00000427526 FGD4Q96M96 766 aa15.07■□□□□ 0
LIG1-202ENST00000427526 ARHGEF3Q9NR81 526 aa15.07■□□□□ 0
LIG1-202ENST00000427526 ANKFY1Q9P2R3 1169 aa15.07■□□□□ 0
LIG1-202ENST00000427526 PNMA3Q9UL41 463 aa15.07■□□□□ 0
LIG1-202ENST00000427526 ZNF148Q9UQR1 794 aa15.07■□□□□ 0
LIG1-202ENST00000427526 ETS1P14921 441 aa15.06■□□□□ 0
LIG1-202ENST00000427526 PECAM1P16284 738 aaPredicted RBP15.06■□□□□ 0
LIG1-202ENST00000427526 PTPN7P35236 360 aa15.06■□□□□ 0
LIG1-202ENST00000427526 SLC18A1P54219 525 aa15.06■□□□□ 0
LIG1-202ENST00000427526 OGDHQ02218 1023 aa15.06■□□□□ 0
LIG1-202ENST00000427526 NR1H3Q13133 447 aa15.06■□□□□ 0
LIG1-202ENST00000427526 TMED2Q15363 201 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms