RNA–Protein interactions for RNA: ENST00000427506.5

GPC1-205, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-205ENST00000427506 CXorf38Q8TB03 319 aa19.81■□□□□ 0.76
GPC1-205ENST00000427506 SHKBP1Q8TBC3 707 aa19.81■□□□□ 0.76
GPC1-205ENST00000427506 PSMG2Q969U7 264 aa19.81■□□□□ 0.76
GPC1-205ENST00000427506 CCDC127Q96BQ5 260 aa19.81■□□□□ 0.76
GPC1-205ENST00000427506 HPDLQ96IR7 371 aa19.81■□□□□ 0.76
GPC1-205ENST00000427506 ZSWIM3Q96MP5 696 aa19.81■□□□□ 0.76
GPC1-205ENST00000427506 ASB16Q96NS5 453 aa19.81■□□□□ 0.76
GPC1-205ENST00000427506 GPR88Q9GZN0 384 aa19.81■□□□□ 0.76
GPC1-205ENST00000427506 GDAP2Q9NXN4 497 aa19.81■□□□□ 0.76
GPC1-205ENST00000427506 DDX43Q9NXZ2 648 aaKnown RBP19.81■□□□□ 0.76
GPC1-205ENST00000427506 HPSEQ9Y251 543 aa19.81■□□□□ 0.76
GPC1-205ENST00000427506 PCDHB5Q9Y5E4 795 aa19.81■□□□□ 0.76
GPC1-205ENST00000427506 ZDBF2Q9HCK1 2354 aa19.81■□□□□ 0.76
GPC1-205ENST00000427506 MUC6Q6W4X9 2439 aa19.81■□□□□ 0.76
GPC1-205ENST00000427506 KLRC4O43908 158 aa19.8■□□□□ 0.76
GPC1-205ENST00000427506 EXOC3O60645 756 aa19.8■□□□□ 0.76
GPC1-205ENST00000427506 FGF19O95750 216 aa19.8■□□□□ 0.76
GPC1-205ENST00000427506 NDUFA8P51970 172 aa19.8■□□□□ 0.76
GPC1-205ENST00000427506 SLC44A4Q53GD3 710 aa19.8■□□□□ 0.76
GPC1-205ENST00000427506 PHLDB3Q6NSJ2 640 aa19.8■□□□□ 0.76
GPC1-205ENST00000427506 TMC8Q8IU68 726 aa19.8■□□□□ 0.76
GPC1-205ENST00000427506 ADGRF2Q8IZF7 708 aa19.8■□□□□ 0.76
GPC1-205ENST00000427506 TOP6BLQ8N6T0 577 aa19.8■□□□□ 0.76
GPC1-205ENST00000427506 GOLGA5Q8TBA6 731 aa19.8■□□□□ 0.76
GPC1-205ENST00000427506 ZSCAN18Q8TBC5 510 aaPredicted RBP19.8■□□□□ 0.76
GPC1-205ENST00000427506 SMARCD2Q92925 531 aa19.8■□□□□ 0.76
GPC1-205ENST00000427506 LPIN3Q9BQK8 851 aa19.8■□□□□ 0.76
GPC1-205ENST00000427506 ACBD6Q9BR61 282 aa19.8■□□□□ 0.76
GPC1-205ENST00000427506 LRRC3Q9BY71 257 aa19.8■□□□□ 0.76
GPC1-205ENST00000427506 ATXN3LQ9H3M9 355 aa19.8■□□□□ 0.76
GPC1-205ENST00000427506 FAM86C1Q9NVL1 165 aa19.8■□□□□ 0.76
GPC1-205ENST00000427506 SIT1Q9Y3P8 196 aa19.8■□□□□ 0.76
GPC1-205ENST00000427506 TCHHQ07283 1943 aa19.8■□□□□ 0.76
GPC1-205ENST00000427506 PRPF40AO75400 957 aaKnown RBP19.79■□□□□ 0.76
GPC1-205ENST00000427506 MYL1P05976 194 aa19.79■□□□□ 0.76
GPC1-205ENST00000427506 HAPLN1P10915 354 aaPredicted RBP19.79■□□□□ 0.76
GPC1-205ENST00000427506 FCARP24071 287 aa19.79■□□□□ 0.76
GPC1-205ENST00000427506 ACAT1P24752 427 aaKnown RBP19.79■□□□□ 0.76
GPC1-205ENST00000427506 GABRR2P28476 465 aa19.79■□□□□ 0.76
GPC1-205ENST00000427506 LHX1P48742 406 aa19.79■□□□□ 0.76
GPC1-205ENST00000427506 MRE11P49959 708 aa19.79■□□□□ 0.76
GPC1-205ENST00000427506 CYP24A1Q07973 514 aa19.79■□□□□ 0.76
GPC1-205ENST00000427506 STK4Q13043 487 aa19.79■□□□□ 0.76
GPC1-205ENST00000427506 GRM2Q14416 872 aa19.79■□□□□ 0.76
GPC1-205ENST00000427506 PSMD6Q15008 389 aa19.79■□□□□ 0.76
GPC1-205ENST00000427506 MLF2Q15773 248 aaPredicted RBP19.79■□□□□ 0.76
GPC1-205ENST00000427506 NFE2Q16621 373 aaPredicted RBP19.79■□□□□ 0.76
GPC1-205ENST00000427506 TRAPPC11Q7Z392 1133 aa19.79■□□□□ 0.76
GPC1-205ENST00000427506 FSIP1Q8NA03 581 aa19.79■□□□□ 0.76
GPC1-205ENST00000427506 DTWD2Q8NBA8 298 aa19.79■□□□□ 0.76
GPC1-205ENST00000427506 GIPC2Q8TF65 315 aa19.79■□□□□ 0.76
GPC1-205ENST00000427506 CCDC47Q96A33 483 aaKnown RBP19.79■□□□□ 0.76
GPC1-205ENST00000427506 CGRRF1Q99675 332 aa19.79■□□□□ 0.76
GPC1-205ENST00000427506 ZNF334Q9HCZ1 680 aaPredicted RBP19.79■□□□□ 0.76
GPC1-205ENST00000427506 RPN1P04843 607 aaKnown RBP19.78■□□□□ 0.76
GPC1-205ENST00000427506 ATF6P18850 670 aa19.78■□□□□ 0.76
GPC1-205ENST00000427506 VIPR2P41587 438 aa19.78■□□□□ 0.76
GPC1-205ENST00000427506 STARD6P59095 220 aa19.78■□□□□ 0.76
GPC1-205ENST00000427506 PRKCQQ04759 706 aa19.78■□□□□ 0.76
GPC1-205ENST00000427506 ARHGAP15Q53QZ3 475 aa19.78■□□□□ 0.76
GPC1-205ENST00000427506 DPH6Q7L8W6 267 aa19.78■□□□□ 0.76
GPC1-205ENST00000427506 C12orf56Q8IXR9 622 aa19.78■□□□□ 0.76
GPC1-205ENST00000427506 CCDC105Q8IYK2 499 aa19.78■□□□□ 0.76
GPC1-205ENST00000427506 GCNAQ96QF7 691 aa19.78■□□□□ 0.76
GPC1-205ENST00000427506 MMS19Q96T76 1030 aa19.78■□□□□ 0.76
GPC1-205ENST00000427506 PHOX2BQ99453 314 aa19.78■□□□□ 0.76
GPC1-205ENST00000427506 PI4K2AQ9BTU6 479 aa19.78■□□□□ 0.76
GPC1-205ENST00000427506 TRMT61BQ9BVS5 477 aaKnown RBP19.78■□□□□ 0.76
GPC1-205ENST00000427506 BRD9Q9H8M2 597 aa19.78■□□□□ 0.76
GPC1-205ENST00000427506 GDPD2Q9HCC8 539 aa19.78■□□□□ 0.76
GPC1-205ENST00000427506 TMLHEQ9NVH6 421 aa19.78■□□□□ 0.76
GPC1-205ENST00000427506 A0A1W2PQ27 194 aa19.77■□□□□ 0.76
GPC1-205ENST00000427506 A0A1W2PQ64 194 aa19.77■□□□□ 0.76
GPC1-205ENST00000427506 A0A1W2PQD8 194 aa19.77■□□□□ 0.76
GPC1-205ENST00000427506 DCNP07585 359 aaKnown RBP19.77■□□□□ 0.76
GPC1-205ENST00000427506 PCSK1P29120 753 aa19.77■□□□□ 0.76
GPC1-205ENST00000427506 SOWAHAQ2M3V2 549 aa19.77■□□□□ 0.76
GPC1-205ENST00000427506 INTS6LQ5JSJ4 861 aaKnown RBP19.77■□□□□ 0.76
GPC1-205ENST00000427506 GAREM2Q75VX8 874 aa19.77■□□□□ 0.76
GPC1-205ENST00000427506 OSTM1Q86WC4 334 aa19.77■□□□□ 0.76
GPC1-205ENST00000427506 KIAA0895Q8NCT3 520 aa19.77■□□□□ 0.76
GPC1-205ENST00000427506 SPATA18Q8TC71 538 aa19.77■□□□□ 0.76
GPC1-205ENST00000427506 FOXQ1Q9C009 403 aa19.77■□□□□ 0.76
GPC1-205ENST00000427506 GTF3C4Q9UKN8 822 aa19.77■□□□□ 0.76
GPC1-205ENST00000427506 FAM237AA0A1B0GTK4 181 aa19.76■□□□□ 0.75
GPC1-205ENST00000427506 KANSL1LA0AUZ9 987 aa19.76■□□□□ 0.75
GPC1-205ENST00000427506 PHACTR2O75167 634 aa19.76■□□□□ 0.75
GPC1-205ENST00000427506 CST3P01034 146 aaPredicted RBP19.76■□□□□ 0.75
GPC1-205ENST00000427506 PSMC3P17980 439 aa19.76■□□□□ 0.75
GPC1-205ENST00000427506 GDI1P31150 447 aa19.76■□□□□ 0.75
GPC1-205ENST00000427506 TRPC3Q13507 836 aa19.76■□□□□ 0.75
GPC1-205ENST00000427506 UBXN2BQ14CS0 331 aa19.76■□□□□ 0.75
GPC1-205ENST00000427506 STXBP5Q5T5C0 1151 aa19.76■□□□□ 0.75
GPC1-205ENST00000427506 GPR158Q5T848 1215 aa19.76■□□□□ 0.75
GPC1-205ENST00000427506 VITQ6UXI7 678 aa19.76■□□□□ 0.75
GPC1-205ENST00000427506 SPATA2LQ8IUW3 424 aaPredicted RBP19.76■□□□□ 0.75
GPC1-205ENST00000427506 YAF2Q8IY57 180 aa19.76■□□□□ 0.75
GPC1-205ENST00000427506 PJA1Q8NG27 643 aa19.76■□□□□ 0.75
GPC1-205ENST00000427506 DEPDC1BQ8WUY9 529 aa19.76■□□□□ 0.75
GPC1-205ENST00000427506 E2F7Q96AV8 911 aa19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms