RNA–Protein interactions for RNA: ENST00000427497.3

AC055811.2-201, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AC055811.2, Length 1,693 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055811.2-201ENST00000427497 ZNF394Q53GI3 561 aa19.1■□□□□ 0.65
AC055811.2-201ENST00000427497 LRRC8DQ7L1W4 858 aa19.1■□□□□ 0.65
AC055811.2-201ENST00000427497 TTC39CQ8N584 583 aa19.1■□□□□ 0.65
AC055811.2-201ENST00000427497 PPP1R10Q96QC0 940 aaKnown RBP19.1■□□□□ 0.65
AC055811.2-201ENST00000427497 NKX2-4Q9H2Z4 354 aa19.1■□□□□ 0.65
AC055811.2-201ENST00000427497 RNF19AQ9NV58 838 aa19.1■□□□□ 0.65
AC055811.2-201ENST00000427497 PCDHGC3Q9UN70 934 aa19.1■□□□□ 0.65
AC055811.2-201ENST00000427497 FTCDO95954 541 aa19.09■□□□□ 0.65
AC055811.2-201ENST00000427497 ITGA4P13612 1032 aa19.09■□□□□ 0.65
AC055811.2-201ENST00000427497 BRD2P25440 801 aaKnown RBP19.09■□□□□ 0.65
AC055811.2-201ENST00000427497 RAB27AP51159 221 aa19.09■□□□□ 0.65
AC055811.2-201ENST00000427497 SOX4Q06945 474 aaPredicted RBP19.09■□□□□ 0.65
AC055811.2-201ENST00000427497 GPNMBQ14956 572 aa19.09■□□□□ 0.65
AC055811.2-201ENST00000427497 NAA35Q5VZE5 725 aa19.09■□□□□ 0.65
AC055811.2-201ENST00000427497 PPP1R2P3Q6NXS1 205 aa19.09■□□□□ 0.65
AC055811.2-201ENST00000427497 MCOLN2Q8IZK6 566 aa19.09■□□□□ 0.65
AC055811.2-201ENST00000427497 MNS1Q8NEH6 495 aa19.09■□□□□ 0.65
AC055811.2-201ENST00000427497 TFAP2BQ92481 460 aa19.09■□□□□ 0.65
AC055811.2-201ENST00000427497 HYOU1Q9Y4L1 999 aa19.09■□□□□ 0.65
AC055811.2-201ENST00000427497 FAM170AA1A519 330 aa19.08■□□□□ 0.65
AC055811.2-201ENST00000427497 MEIS3P2A8K0S8 358 aa19.08■□□□□ 0.65
AC055811.2-201ENST00000427497 DYNC1I1O14576 645 aa19.08■□□□□ 0.65
AC055811.2-201ENST00000427497 NCK2O43639 380 aa19.08■□□□□ 0.65
AC055811.2-201ENST00000427497 BUB1BO60566 1050 aaPredicted RBP19.08■□□□□ 0.65
AC055811.2-201ENST00000427497 TADA3O75528 432 aa19.08■□□□□ 0.65
AC055811.2-201ENST00000427497 LSM8O95777 96 aaKnown RBP19.08■□□□□ 0.65
AC055811.2-201ENST00000427497 TCP1P17987 556 aaKnown RBP19.08■□□□□ 0.65
AC055811.2-201ENST00000427497 MON1BQ7L1V2 547 aa19.08■□□□□ 0.65
AC055811.2-201ENST00000427497 PHF13Q86YI8 300 aaPredicted RBP19.08■□□□□ 0.65
AC055811.2-201ENST00000427497 PHF6Q8IWS0 365 aaKnown RBP eCLIP19.08■□□□□ 0.65
AC055811.2-201ENST00000427497 SYCE1Q8N0S2 351 aa19.08■□□□□ 0.65
AC055811.2-201ENST00000427497 CEP112Q8N8E3 955 aa19.08■□□□□ 0.65
AC055811.2-201ENST00000427497 SLC4A11Q8NBS3 891 aa19.08■□□□□ 0.65
AC055811.2-201ENST00000427497 GSTCDQ8NEC7 633 aa19.08■□□□□ 0.65
AC055811.2-201ENST00000427497 CPA5Q8WXQ8 436 aa19.08■□□□□ 0.65
AC055811.2-201ENST00000427497 ZNF653Q96CK0 615 aa19.08■□□□□ 0.65
AC055811.2-201ENST00000427497 TWNKQ96RR1 684 aa19.08■□□□□ 0.65
AC055811.2-201ENST00000427497 ELOVL4Q9GZR5 314 aa19.08■□□□□ 0.65
AC055811.2-201ENST00000427497 PDCL3Q9H2J4 239 aa19.08■□□□□ 0.65
AC055811.2-201ENST00000427497 SLC28A3Q9HAS3 691 aa19.08■□□□□ 0.65
AC055811.2-201ENST00000427497 ABCB6Q9NP58 842 aa19.08■□□□□ 0.65
AC055811.2-201ENST00000427497 AVENQ9NQS1 362 aaPredicted RBP19.08■□□□□ 0.65
AC055811.2-201ENST00000427497 HMGXB4Q9UGU5 601 aa19.08■□□□□ 0.65
AC055811.2-201ENST00000427497 PUF60Q9UHX1 559 aaKnown RBP19.08■□□□□ 0.65
AC055811.2-201ENST00000427497 BARX2Q9UMQ3 279 aaPredicted RBP19.08■□□□□ 0.65
AC055811.2-201ENST00000427497 GIT1Q9Y2X7 761 aa19.08■□□□□ 0.65
AC055811.2-201ENST00000427497 PCDHA11Q9Y5I1 949 aa19.08■□□□□ 0.65
AC055811.2-201ENST00000427497 SRGAP2O75044 1071 aa19.08■□□□□ 0.64
AC055811.2-201ENST00000427497 PARNO95453 639 aaKnown RBP19.08■□□□□ 0.64
AC055811.2-201ENST00000427497 MYBL1P10243 752 aa19.08■□□□□ 0.64
AC055811.2-201ENST00000427497 ATF7P17544 494 aaPredicted RBP19.08■□□□□ 0.64
AC055811.2-201ENST00000427497 LRPAP1P30533 357 aa19.08■□□□□ 0.64
AC055811.2-201ENST00000427497 CDH5P33151 784 aaPredicted RBP19.08■□□□□ 0.64
AC055811.2-201ENST00000427497 NSFP46459 744 aaKnown RBP19.08■□□□□ 0.64
AC055811.2-201ENST00000427497 MBTPS1Q14703 1052 aa19.08■□□□□ 0.64
AC055811.2-201ENST00000427497 AGMOQ6ZNB7 445 aa19.08■□□□□ 0.64
AC055811.2-201ENST00000427497 TRIM11Q96F44 468 aa19.08■□□□□ 0.64
AC055811.2-201ENST00000427497 VCPIP1Q96JH7 1222 aa19.08■□□□□ 0.64
AC055811.2-201ENST00000427497 ZFP42Q96MM3 310 aa19.08■□□□□ 0.64
AC055811.2-201ENST00000427497 OSBPL9Q96SU4 736 aa19.08■□□□□ 0.64
AC055811.2-201ENST00000427497 PRDM12Q9H4Q4 367 aa19.08■□□□□ 0.64
AC055811.2-201ENST00000427497 CTTNBP2NLQ9P2B4 639 aa19.08■□□□□ 0.64
AC055811.2-201ENST00000427497 UVRAGQ9P2Y5 699 aa19.08■□□□□ 0.64
AC055811.2-201ENST00000427497 PTPRSQ13332 1948 aa19.07■□□□□ 0.64
AC055811.2-201ENST00000427497 A0A0U1RQF3 1178 aa19.07■□□□□ 0.64
AC055811.2-201ENST00000427497 EFCAB8A8MWE9 144 aa19.07■□□□□ 0.64
AC055811.2-201ENST00000427497 BAIAP3O94812 1187 aa19.07■□□□□ 0.64
AC055811.2-201ENST00000427497 MYOGP15173 224 aa19.07■□□□□ 0.64
AC055811.2-201ENST00000427497 PNPLA4P41247 253 aa19.07■□□□□ 0.64
AC055811.2-201ENST00000427497 PASD1Q8IV76 773 aa19.07■□□□□ 0.64
AC055811.2-201ENST00000427497 TMEM176AQ96HP8 235 aa19.07■□□□□ 0.64
AC055811.2-201ENST00000427497 ZNF560Q96MR9 790 aa19.07■□□□□ 0.64
AC055811.2-201ENST00000427497 MMS19Q96T76 1030 aa19.07■□□□□ 0.64
AC055811.2-201ENST00000427497 SLC9A7Q96T83 725 aa19.07■□□□□ 0.64
AC055811.2-201ENST00000427497 GOLPH3Q9H4A6 298 aa19.07■□□□□ 0.64
AC055811.2-201ENST00000427497 GDAP2Q9NXN4 497 aa19.07■□□□□ 0.64
AC055811.2-201ENST00000427497 SNX9Q9Y5X1 595 aa19.07■□□□□ 0.64
AC055811.2-201ENST00000427497 DLL1O00548 723 aa19.06■□□□□ 0.64
AC055811.2-201ENST00000427497 ATMINO43313 823 aaPredicted RBP19.06■□□□□ 0.64
AC055811.2-201ENST00000427497 NBNO60934 754 aa19.06■□□□□ 0.64
AC055811.2-201ENST00000427497 CXCL10P02778 98 aa19.06■□□□□ 0.64
AC055811.2-201ENST00000427497 SSTR3P32745 418 aaPredicted RBP19.06■□□□□ 0.64
AC055811.2-201ENST00000427497 MLH1P40692 756 aa19.06■□□□□ 0.64
AC055811.2-201ENST00000427497 PTP4A2Q12974 167 aa19.06■□□□□ 0.64
AC055811.2-201ENST00000427497 C11orf63Q6NUN7 778 aa19.06■□□□□ 0.64
AC055811.2-201ENST00000427497 LIMS2Q7Z4I7 341 aa19.06■□□□□ 0.64
AC055811.2-201ENST00000427497 DAAM2Q86T65 1068 aa19.06■□□□□ 0.64
AC055811.2-201ENST00000427497 NT5DC3Q86UY8 548 aa19.06■□□□□ 0.64
AC055811.2-201ENST00000427497 PHOSPHO2Q8TCD6 241 aa19.06■□□□□ 0.64
AC055811.2-201ENST00000427497 TSC1Q92574 1164 aa19.06■□□□□ 0.64
AC055811.2-201ENST00000427497 LPPQ93052 612 aa19.06■□□□□ 0.64
AC055811.2-201ENST00000427497 GAD1Q99259 594 aa19.06■□□□□ 0.64
AC055811.2-201ENST00000427497 GAS2L1Q99501 681 aaPredicted RBP19.06■□□□□ 0.64
AC055811.2-201ENST00000427497 ADAM2Q99965 735 aa19.06■□□□□ 0.64
AC055811.2-201ENST00000427497 ZNF518BQ9C0D4 1074 aa19.06■□□□□ 0.64
AC055811.2-201ENST00000427497 GOLGA2P5Q9HBQ8 144 aa19.06■□□□□ 0.64
AC055811.2-201ENST00000427497 SLC38A7Q9NVC3 462 aa19.06■□□□□ 0.64
AC055811.2-201ENST00000427497 CNOT8Q9UFF9 292 aaKnown RBP19.06■□□□□ 0.64
AC055811.2-201ENST00000427497 GTF3C5Q9Y5Q8 519 aaPredicted RBP19.06■□□□□ 0.64
AC055811.2-201ENST00000427497 CUL9Q8IWT3 2517 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms