RNA–Protein interactions for RNA: ENST00000427494.6

APOBEC3D-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3D, humanhuman

TSL 1 (best) BASIC

Gene APOBEC3D, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3D-202ENST00000427494 RNF25Q96BH1 459 aaPredicted RBP14.82□□□□□ -0.04
APOBEC3D-202ENST00000427494 CCDC114Q96M63 670 aa14.82□□□□□ -0.04
APOBEC3D-202ENST00000427494 TWNKQ96RR1 684 aa14.82□□□□□ -0.04
APOBEC3D-202ENST00000427494 OSBPL8Q9BZF1 889 aa14.82□□□□□ -0.04
APOBEC3D-202ENST00000427494 ELOVL4Q9GZR5 314 aa14.82□□□□□ -0.04
APOBEC3D-202ENST00000427494 LHX5Q9H2C1 402 aa14.82□□□□□ -0.04
APOBEC3D-202ENST00000427494 ASIC3Q9UHC3 531 aa14.82□□□□□ -0.04
APOBEC3D-202ENST00000427494 ITGA11Q9UKX5 1188 aa14.82□□□□□ -0.04
APOBEC3D-202ENST00000427494 GINS2Q9Y248 185 aa14.82□□□□□ -0.04
APOBEC3D-202ENST00000427494 C2CD2Q9Y426 696 aa14.82□□□□□ -0.04
APOBEC3D-202ENST00000427494 F8VP50 259 aa14.81□□□□□ -0.04
APOBEC3D-202ENST00000427494 PI4K2BG5E9Z4 385 aa14.81□□□□□ -0.04
APOBEC3D-202ENST00000427494 CILPO75339 1184 aa14.81□□□□□ -0.04
APOBEC3D-202ENST00000427494 NPTXRO95502 500 aa14.81□□□□□ -0.04
APOBEC3D-202ENST00000427494 CETN2P41208 172 aa14.81□□□□□ -0.04
APOBEC3D-202ENST00000427494 GNGT1P63211 74 aa14.81□□□□□ -0.04
APOBEC3D-202ENST00000427494 CALCOCO2Q13137 446 aa14.81□□□□□ -0.04
APOBEC3D-202ENST00000427494 PIGHQ14442 188 aaPredicted RBP14.81□□□□□ -0.04
APOBEC3D-202ENST00000427494 DCAF4L1Q3SXM0 396 aa14.81□□□□□ -0.04
APOBEC3D-202ENST00000427494 ATP13A4Q4VNC1 1196 aa14.81□□□□□ -0.04
APOBEC3D-202ENST00000427494 PPP1R13LQ8WUF5 828 aa14.81□□□□□ -0.04
APOBEC3D-202ENST00000427494 KIF12Q96FN5 646 aa14.81□□□□□ -0.04
APOBEC3D-202ENST00000427494 TMEM176AQ96HP8 235 aa14.81□□□□□ -0.04
APOBEC3D-202ENST00000427494 RBM41Q96IZ5 413 aaKnown RBP14.81□□□□□ -0.04
APOBEC3D-202ENST00000427494 VRTNQ9H8Y1 702 aa14.81□□□□□ -0.04
APOBEC3D-202ENST00000427494 CYP3A43Q9HB55 503 aa14.81□□□□□ -0.04
APOBEC3D-202ENST00000427494 HOMER3Q9NSC5 361 aa14.81□□□□□ -0.04
APOBEC3D-202ENST00000427494 DPP3Q9NY33 737 aa14.81□□□□□ -0.04
APOBEC3D-202ENST00000427494 CYTH4Q9UIA0 394 aa14.81□□□□□ -0.04
APOBEC3D-202ENST00000427494 RALGAPA2Q2PPJ7 1873 aa14.81□□□□□ -0.04
APOBEC3D-202ENST00000427494 GAS8O95995 478 aa14.8□□□□□ -0.04
APOBEC3D-202ENST00000427494 SMIM10L2AP0DMW4 78 aa14.8□□□□□ -0.04
APOBEC3D-202ENST00000427494 SMIM10L2BP0DMW5 78 aa14.8□□□□□ -0.04
APOBEC3D-202ENST00000427494 GRM5P41594 1212 aa14.8□□□□□ -0.04
APOBEC3D-202ENST00000427494 RBP5P82980 135 aa14.8□□□□□ -0.04
APOBEC3D-202ENST00000427494 NFX1Q12986 1120 aaKnown RBP14.8□□□□□ -0.04
APOBEC3D-202ENST00000427494 PTK6Q13882 451 aa14.8□□□□□ -0.04
APOBEC3D-202ENST00000427494 TTC19Q6DKK2 380 aaPredicted RBP14.8□□□□□ -0.04
APOBEC3D-202ENST00000427494 SYDE1Q6ZW31 735 aaPredicted RBP14.8□□□□□ -0.04
APOBEC3D-202ENST00000427494 ANKS1BQ7Z6G8 1248 aa14.8□□□□□ -0.04
APOBEC3D-202ENST00000427494 RCOR2Q8IZ40 523 aa14.8□□□□□ -0.04
APOBEC3D-202ENST00000427494 SLITRK1Q96PX8 696 aa14.8□□□□□ -0.04
APOBEC3D-202ENST00000427494 GCOM2Q9BZD3 368 aaPredicted RBP14.8□□□□□ -0.04
APOBEC3D-202ENST00000427494 FAM129AQ9BZQ8 928 aa14.8□□□□□ -0.04
APOBEC3D-202ENST00000427494 ADAMTS10Q9H324 1103 aa14.8□□□□□ -0.04
APOBEC3D-202ENST00000427494 PABPC3Q9H361 631 aaKnown RBP14.8□□□□□ -0.04
APOBEC3D-202ENST00000427494 BCCIPQ9P287 314 aaKnown RBP eCLIP14.8□□□□□ -0.04
APOBEC3D-202ENST00000427494 TJP2Q9UDY2 1190 aa14.8□□□□□ -0.04
APOBEC3D-202ENST00000427494 MICAL2O94851 1124 aa14.8□□□□□ -0.04
APOBEC3D-202ENST00000427494 IRAK1P51617 712 aa14.8□□□□□ -0.04
APOBEC3D-202ENST00000427494 EIF3BP55884 814 aaKnown RBP14.8□□□□□ -0.04
APOBEC3D-202ENST00000427494 MAP2K5Q13163 448 aa14.8□□□□□ -0.04
APOBEC3D-202ENST00000427494 TRIP13Q15645 432 aaPredicted RBP14.8□□□□□ -0.04
APOBEC3D-202ENST00000427494 CCNG2Q16589 344 aa14.8□□□□□ -0.04
APOBEC3D-202ENST00000427494 KRT71Q3SY84 523 aa14.8□□□□□ -0.04
APOBEC3D-202ENST00000427494 ODF2Q5BJF6 829 aa14.8□□□□□ -0.04
APOBEC3D-202ENST00000427494 MORN1Q5T089 497 aa14.8□□□□□ -0.04
APOBEC3D-202ENST00000427494 LRRC38Q5VT99 294 aa14.8□□□□□ -0.04
APOBEC3D-202ENST00000427494 DENND2CQ68D51 928 aa14.8□□□□□ -0.04
APOBEC3D-202ENST00000427494 NIPA2Q8N8Q9 360 aa14.8□□□□□ -0.04
APOBEC3D-202ENST00000427494 ATL2Q8NHH9 583 aa14.8□□□□□ -0.04
APOBEC3D-202ENST00000427494 FAM118BQ9BPY3 351 aa14.8□□□□□ -0.04
APOBEC3D-202ENST00000427494 EPB41L4BQ9H329 900 aa14.8□□□□□ -0.04
APOBEC3D-202ENST00000427494 SYNCQ9H7C4 482 aa14.8□□□□□ -0.04
APOBEC3D-202ENST00000427494 CALCOCO1Q9P1Z2 691 aa14.8□□□□□ -0.04
APOBEC3D-202ENST00000427494 WHRNQ9P202 907 aa14.8□□□□□ -0.04
APOBEC3D-202ENST00000427494 FEZ2Q9UHY8 353 aaPredicted RBP14.8□□□□□ -0.04
APOBEC3D-202ENST00000427494 A6NJR5 290 aa14.79□□□□□ -0.04
APOBEC3D-202ENST00000427494 M0QYV0 167 aa14.79□□□□□ -0.04
APOBEC3D-202ENST00000427494 IVLP07476 585 aa14.79□□□□□ -0.04
APOBEC3D-202ENST00000427494 KRT3P12035 628 aa14.79□□□□□ -0.04
APOBEC3D-202ENST00000427494 PSMA2P25787 234 aa14.79□□□□□ -0.04
APOBEC3D-202ENST00000427494 HPDP32754 393 aaPredicted RBP14.79□□□□□ -0.04
APOBEC3D-202ENST00000427494 PSMC1P62191 440 aaKnown RBP14.79□□□□□ -0.04
APOBEC3D-202ENST00000427494 PDCLQ13371 301 aa14.79□□□□□ -0.04
APOBEC3D-202ENST00000427494 SKIDA1Q1XH10 827 aa14.79□□□□□ -0.04
APOBEC3D-202ENST00000427494 AGBL2Q5U5Z8 902 aa14.79□□□□□ -0.04
APOBEC3D-202ENST00000427494 KAZNQ674X7 775 aa14.79□□□□□ -0.04
APOBEC3D-202ENST00000427494 MFSD7Q6UXD7 560 aa14.79□□□□□ -0.04
APOBEC3D-202ENST00000427494 CATSPER4Q7RTX7 472 aa14.79□□□□□ -0.04
APOBEC3D-202ENST00000427494 APBB1IPQ7Z5R6 666 aaPredicted RBP14.79□□□□□ -0.04
APOBEC3D-202ENST00000427494 NT5DC4Q86YG4 428 aa14.79□□□□□ -0.04
APOBEC3D-202ENST00000427494 LENG1Q96BZ8 264 aaPredicted RBP14.79□□□□□ -0.04
APOBEC3D-202ENST00000427494 CPXM1Q96SM3 734 aa14.79□□□□□ -0.04
APOBEC3D-202ENST00000427494 FLRT1Q9NZU1 646 aa14.79□□□□□ -0.04
APOBEC3D-202ENST00000427494 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.79□□□□□ -0.04
APOBEC3D-202ENST00000427494 GNEQ9Y223 722 aaKnown RBP14.79□□□□□ -0.04
APOBEC3D-202ENST00000427494 TRIP11Q15643 1979 aa14.79□□□□□ -0.04
APOBEC3D-202ENST00000427494 GRIN2DO15399 1336 aa14.78□□□□□ -0.04
APOBEC3D-202ENST00000427494 SIGLEC16A6NMB1 481 aa14.78□□□□□ -0.04
APOBEC3D-202ENST00000427494 GPR32O75388 356 aa14.78□□□□□ -0.04
APOBEC3D-202ENST00000427494 F2P00734 622 aa14.78□□□□□ -0.04
APOBEC3D-202ENST00000427494 SHBGP04278 402 aa14.78□□□□□ -0.04
APOBEC3D-202ENST00000427494 ERBB2P04626 1255 aa14.78□□□□□ -0.04
APOBEC3D-202ENST00000427494 NUDT17P0C025 328 aa14.78□□□□□ -0.04
APOBEC3D-202ENST00000427494 VDRP11473 427 aa14.78□□□□□ -0.04
APOBEC3D-202ENST00000427494 CYP2C9P11712 490 aa14.78□□□□□ -0.04
APOBEC3D-202ENST00000427494 KRT10P13645 584 aa14.78□□□□□ -0.04
APOBEC3D-202ENST00000427494 ATF7P17544 494 aaPredicted RBP14.78□□□□□ -0.04
APOBEC3D-202ENST00000427494 HUNKP57058 714 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms