RNA–Protein interactions for RNA: ENST00000427191.6

PTPN13-203, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,487 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-203ENST00000427191 CALB2P22676 271 aa15.02■□□□□ -0
PTPN13-203ENST00000427191 COQ7Q99807 217 aa15.02■□□□□ -0
PTPN13-203ENST00000427191 TLR7Q9NYK1 1049 aaKnown RBP15.02■□□□□ -0
PTPN13-203ENST00000427191 USP17L5A8MUK1 530 aa15.02■□□□□ -0
PTPN13-203ENST00000427191 VCLP18206 1134 aa15.02■□□□□ -0
PTPN13-203ENST00000427191 CDC25AP30304 524 aa15.02■□□□□ -0
PTPN13-203ENST00000427191 GYS2P54840 703 aa15.02■□□□□ -0
PTPN13-203ENST00000427191 UNC45BQ8IWX7 931 aa15.02■□□□□ -0
PTPN13-203ENST00000427191 SLC35G2Q8TBE7 412 aa15.02■□□□□ -0
PTPN13-203ENST00000427191 MAGEB18Q96M61 343 aa15.02■□□□□ -0
PTPN13-203ENST00000427191 MTIF3Q9H2K0 278 aaKnown RBP15.02■□□□□ -0
PTPN13-203ENST00000427191 DYTNA2CJ06 578 aa15.02■□□□□ -0
PTPN13-203ENST00000427191 ASNA1O43681 348 aa15.02■□□□□ -0
PTPN13-203ENST00000427191 COX10Q12887 443 aa15.02■□□□□ -0
PTPN13-203ENST00000427191 GALNT4Q8N4A0 578 aa15.02■□□□□ -0
PTPN13-203ENST00000427191 DLGAP2Q9P1A6 1054 aa15.02■□□□□ -0
PTPN13-203ENST00000427191 A2ML1A8K2U0 1454 aa15.02□□□□□ -0.01
PTPN13-203ENST00000427191 MAGEB2O15479 319 aa15.02□□□□□ -0.01
PTPN13-203ENST00000427191 FCER1AP12319 257 aa15.02□□□□□ -0.01
PTPN13-203ENST00000427191 PTPN21Q16825 1174 aa15.02□□□□□ -0.01
PTPN13-203ENST00000427191 ANKS6Q68DC2 871 aa15.02□□□□□ -0.01
PTPN13-203ENST00000427191 SPATA18Q8TC71 538 aa15.02□□□□□ -0.01
PTPN13-203ENST00000427191 AGR3Q8TD06 166 aa15.02□□□□□ -0.01
PTPN13-203ENST00000427191 ZNF333Q96JL9 665 aa15.02□□□□□ -0.01
PTPN13-203ENST00000427191 CATSPER2Q96P56 530 aa15.02□□□□□ -0.01
PTPN13-203ENST00000427191 STRBPQ96SI9 672 aaKnown RBP15.02□□□□□ -0.01
PTPN13-203ENST00000427191 EIF2AK1Q9BQI3 630 aaKnown RBP15.02□□□□□ -0.01
PTPN13-203ENST00000427191 AP3M1Q9Y2T2 418 aa15.02□□□□□ -0.01
PTPN13-203ENST00000427191 KDM6AO15550 1401 aaPredicted RBP15.02□□□□□ -0.01
PTPN13-203ENST00000427191 NEO1Q92859 1461 aa15.02□□□□□ -0.01
PTPN13-203ENST00000427191 USPL1Q5W0Q7 1092 aa15.02□□□□□ -0.01
PTPN13-203ENST00000427191 GLYCTKQ8IVS8 523 aa15.02□□□□□ -0.01
PTPN13-203ENST00000427191 SPATA33Q96N06 139 aa15.02□□□□□ -0.01
PTPN13-203ENST00000427191 QKIQ96PU8 341 aaKnown RBP eCLIP15.02□□□□□ -0.01
PTPN13-203ENST00000427191 SIK2Q9H0K1 926 aa15.02□□□□□ -0.01
PTPN13-203ENST00000427191 TRIM49BA6NDI0 452 aa15.02□□□□□ -0.01
PTPN13-203ENST00000427191 TBC1D12O60347 775 aa15.02□□□□□ -0.01
PTPN13-203ENST00000427191 RHOBTB1O94844 696 aa15.02□□□□□ -0.01
PTPN13-203ENST00000427191 SOAT1P35610 550 aa15.02□□□□□ -0.01
PTPN13-203ENST00000427191 TMEM132DQ14C87 1099 aa15.02□□□□□ -0.01
PTPN13-203ENST00000427191 C12orf60Q5U649 245 aa15.02□□□□□ -0.01
PTPN13-203ENST00000427191 SNX30Q5VWJ9 437 aa15.02□□□□□ -0.01
PTPN13-203ENST00000427191 C3orf62Q6ZUJ4 267 aa15.02□□□□□ -0.01
PTPN13-203ENST00000427191 TTC30AQ86WT1 665 aa15.02□□□□□ -0.01
PTPN13-203ENST00000427191 GSPT2Q8IYD1 628 aaKnown RBP15.02□□□□□ -0.01
PTPN13-203ENST00000427191 CCSER1Q9C0I3 900 aa15.02□□□□□ -0.01
PTPN13-203ENST00000427191 TBX3O15119 743 aa15.01□□□□□ -0.01
PTPN13-203ENST00000427191 SESN2P58004 480 aaPredicted RBP15.01□□□□□ -0.01
PTPN13-203ENST00000427191 TRMT5Q32P41 509 aaKnown RBP15.01□□□□□ -0.01
PTPN13-203ENST00000427191 SNRNP48Q6IEG0 339 aaKnown RBP15.01□□□□□ -0.01
PTPN13-203ENST00000427191 TMEM2Q9UHN6 1383 aa15.01□□□□□ -0.01
PTPN13-203ENST00000427191 MED26O95402 600 aa15.01□□□□□ -0.01
PTPN13-203ENST00000427191 FYNP06241 537 aa15.01□□□□□ -0.01
PTPN13-203ENST00000427191 ALOX15P16050 662 aaPredicted RBP15.01□□□□□ -0.01
PTPN13-203ENST00000427191 CIAPIN1Q6FI81 312 aa15.01□□□□□ -0.01
PTPN13-203ENST00000427191 POP5Q969H6 163 aaKnown RBP15.01□□□□□ -0.01
PTPN13-203ENST00000427191 COPG2Q9UBF2 871 aa15.01□□□□□ -0.01
PTPN13-203ENST00000427191 MYCP01106 439 aaPredicted RBP15.01□□□□□ -0.01
PTPN13-203ENST00000427191 TSNQ15631 228 aaKnown RBP15.01□□□□□ -0.01
PTPN13-203ENST00000427191 PACSIN1Q9BY11 444 aa15.01□□□□□ -0.01
PTPN13-203ENST00000427191 KLHL41O60662 606 aa15.01□□□□□ -0.01
PTPN13-203ENST00000427191 IL6P05231 212 aa15.01□□□□□ -0.01
PTPN13-203ENST00000427191 CYP2C8P10632 490 aa15.01□□□□□ -0.01
PTPN13-203ENST00000427191 SV2CQ496J9 727 aa15.01□□□□□ -0.01
PTPN13-203ENST00000427191 CROCCP3Q8IVE0 287 aa15.01□□□□□ -0.01
PTPN13-203ENST00000427191 ANKRD49Q8WVL7 239 aa15.01□□□□□ -0.01
PTPN13-203ENST00000427191 ATXN7L3BQ96GX2 97 aa15.01□□□□□ -0.01
PTPN13-203ENST00000427191 GLRA3O75311 464 aa15.01□□□□□ -0.01
PTPN13-203ENST00000427191 YWHABP31946 246 aaKnown RBP15.01□□□□□ -0.01
PTPN13-203ENST00000427191 RFC5P40937 340 aa15.01□□□□□ -0.01
PTPN13-203ENST00000427191 EFHC1Q5JVL4 640 aa15.01□□□□□ -0.01
PTPN13-203ENST00000427191 ZCCHC8Q6NZY4 707 aaKnown RBP15.01□□□□□ -0.01
PTPN13-203ENST00000427191 KLHL11Q9NVR0 708 aa15.01□□□□□ -0.01
PTPN13-203ENST00000427191 C2orf81A6NN90 581 aa15.01□□□□□ -0.01
PTPN13-203ENST00000427191 STIP1P31948 543 aaKnown RBP15.01□□□□□ -0.01
PTPN13-203ENST00000427191 GUCY1A2P33402 732 aa15.01□□□□□ -0.01
PTPN13-203ENST00000427191 TXNRD1Q16881 649 aa15.01□□□□□ -0.01
PTPN13-203ENST00000427191 PMF1Q6P1K2 205 aa15.01□□□□□ -0.01
PTPN13-203ENST00000427191 ADCK2Q7Z695 626 aa15.01□□□□□ -0.01
PTPN13-203ENST00000427191 CENPLQ8N0S6 344 aaPredicted RBP15.01□□□□□ -0.01
PTPN13-203ENST00000427191 C2orf69Q8N8R5 385 aa15.01□□□□□ -0.01
PTPN13-203ENST00000427191 ZNF507Q8TCN5 953 aa15.01□□□□□ -0.01
PTPN13-203ENST00000427191 UBXN6Q9BZV1 441 aa15.01□□□□□ -0.01
PTPN13-203ENST00000427191 NBPF26B4DH59 902 aa15.01□□□□□ -0.01
PTPN13-203ENST00000427191 NBPF15Q8N660 670 aa15.01□□□□□ -0.01
PTPN13-203ENST00000427191 SLC20A1Q8WUM9 679 aa15.01□□□□□ -0.01
PTPN13-203ENST00000427191 ATAD3AQ9NVI7 634 aa15.01□□□□□ -0.01
PTPN13-203ENST00000427191 PNPLA4P41247 253 aa15□□□□□ -0.01
PTPN13-203ENST00000427191 CYP51A1Q16850 503 aa15□□□□□ -0.01
PTPN13-203ENST00000427191 TMC5Q6UXY8 1006 aa15□□□□□ -0.01
PTPN13-203ENST00000427191 ZNF786Q8N393 782 aa15□□□□□ -0.01
PTPN13-203ENST00000427191 MMP19Q99542 508 aa15□□□□□ -0.01
PTPN13-203ENST00000427191 C7orf25Q9BPX7 421 aa15□□□□□ -0.01
PTPN13-203ENST00000427191 MKNK1Q9BUB5 465 aa15□□□□□ -0.01
PTPN13-203ENST00000427191 GABBR1Q9UBS5 961 aa15□□□□□ -0.01
PTPN13-203ENST00000427191 PDS5AQ29RF7 1337 aaKnown RBP15□□□□□ -0.01
PTPN13-203ENST00000427191 PLEKHA8P1O95397 391 aa15□□□□□ -0.01
PTPN13-203ENST00000427191 MRNIPQ6NTE8 343 aa15□□□□□ -0.01
PTPN13-203ENST00000427191 ENO4A6NNW6 628 aa15□□□□□ -0.01
PTPN13-203ENST00000427191 XPO1O14980 1071 aaKnown RBP15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms