RNA–Protein interactions for RNA: ENST00000426840.1

LINC01049-201, Transcript of long intergenic non-protein coding RNA 1049, humanhuman

TSL 1 (best) BASIC

Gene LINC01049, Length 742 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01049-201ENST00000426840 IRAK3Q9Y616 596 aa7.99□□□□□ -1.13
LINC01049-201ENST00000426840 C2orf71A6NGG8 1288 aa7.98□□□□□ -1.13
LINC01049-201ENST00000426840 HIDE1A8MVS5 230 aa7.98□□□□□ -1.13
LINC01049-201ENST00000426840 M0QZQ0 153 aa7.98□□□□□ -1.13
LINC01049-201ENST00000426840 TMEM191BP0C7N4 346 aa7.98□□□□□ -1.13
LINC01049-201ENST00000426840 TRIM49P0CI25 452 aa7.98□□□□□ -1.13
LINC01049-201ENST00000426840 TRIM49CP0CI26 452 aa7.98□□□□□ -1.13
LINC01049-201ENST00000426840 EPB41P11171 864 aaKnown RBP7.98□□□□□ -1.13
LINC01049-201ENST00000426840 KRT13P13646 458 aa7.98□□□□□ -1.13
LINC01049-201ENST00000426840 RHOQP17081 205 aa7.98□□□□□ -1.13
LINC01049-201ENST00000426840 PAX3P23760 479 aa7.98□□□□□ -1.13
LINC01049-201ENST00000426840 POLR2BP30876 1174 aaKnown RBP7.98□□□□□ -1.13
LINC01049-201ENST00000426840 GTF2H1P32780 548 aa7.98□□□□□ -1.13
LINC01049-201ENST00000426840 AP3M2P53677 418 aa7.98□□□□□ -1.13
LINC01049-201ENST00000426840 RBP5P82980 135 aa7.98□□□□□ -1.13
LINC01049-201ENST00000426840 DSG1Q02413 1049 aa7.98□□□□□ -1.13
LINC01049-201ENST00000426840 ELAVL2Q12926 359 aaKnown RBP7.98□□□□□ -1.13
LINC01049-201ENST00000426840 STX1AQ16623 288 aa7.98□□□□□ -1.13
LINC01049-201ENST00000426840 USP41Q3LFD5 358 aa7.98□□□□□ -1.13
LINC01049-201ENST00000426840 ZACNQ401N2 412 aa7.98□□□□□ -1.13
LINC01049-201ENST00000426840 RTP2Q5QGT7 225 aa7.98□□□□□ -1.13
LINC01049-201ENST00000426840 FAM171A1Q5VUB5 890 aa7.98□□□□□ -1.13
LINC01049-201ENST00000426840 TDRD10Q5VZ19 366 aaKnown RBP7.98□□□□□ -1.13
LINC01049-201ENST00000426840 ADGRD2Q7Z7M1 963 aa7.98□□□□□ -1.13
LINC01049-201ENST00000426840 TRIM59Q8IWR1 403 aa7.98□□□□□ -1.13
LINC01049-201ENST00000426840 GPR65Q8IYL9 337 aa7.98□□□□□ -1.13
LINC01049-201ENST00000426840 LRRC52Q8N7C0 313 aa7.98□□□□□ -1.13
LINC01049-201ENST00000426840 LNX1Q8TBB1 728 aaPredicted RBP7.98□□□□□ -1.13
LINC01049-201ENST00000426840 ENOX1Q8TC92 643 aaKnown RBP7.98□□□□□ -1.13
LINC01049-201ENST00000426840 MICAL1Q8TDZ2 1067 aa7.98□□□□□ -1.13
LINC01049-201ENST00000426840 GLMNQ92990 594 aa7.98□□□□□ -1.13
LINC01049-201ENST00000426840 B3GALT6Q96L58 329 aa7.98□□□□□ -1.13
LINC01049-201ENST00000426840 SENP8Q96LD8 212 aa7.98□□□□□ -1.13
LINC01049-201ENST00000426840 TCF25Q9BQ70 676 aa7.98□□□□□ -1.13
LINC01049-201ENST00000426840 RXFP1Q9HBX9 757 aa7.98□□□□□ -1.13
LINC01049-201ENST00000426840 METTL14Q9HCE5 456 aaKnown RBP7.98□□□□□ -1.13
LINC01049-201ENST00000426840 NGRNQ9NPE2 291 aaKnown RBP7.98□□□□□ -1.13
LINC01049-201ENST00000426840 STK39Q9UEW8 545 aa7.98□□□□□ -1.13
LINC01049-201ENST00000426840 NUB1Q9Y5A7 615 aa7.98□□□□□ -1.13
LINC01049-201ENST00000426840 SF3B1O75533 1304 aaKnown RBP eCLIP7.98□□□□□ -1.13
LINC01049-201ENST00000426840 LAMA2P24043 3122 aaKnown RBP7.98□□□□□ -1.13
LINC01049-201ENST00000426840 VWA8A3KMH1 1905 aa7.97□□□□□ -1.13
LINC01049-201ENST00000426840 ATG2AQ2TAZ0 1938 aa7.97□□□□□ -1.13
LINC01049-201ENST00000426840 CHD9Q3L8U1 2897 aa7.97□□□□□ -1.13
LINC01049-201ENST00000426840 SYCE3A1L190 88 aa7.97□□□□□ -1.13
LINC01049-201ENST00000426840 KPNA7A9QM74 516 aa7.97□□□□□ -1.13
LINC01049-201ENST00000426840 SYN3O14994 580 aa7.97□□□□□ -1.13
LINC01049-201ENST00000426840 TRAPPC3O43617 180 aa7.97□□□□□ -1.13
LINC01049-201ENST00000426840 TBC1D4O60343 1298 aa7.97□□□□□ -1.13
LINC01049-201ENST00000426840 LRRN2O75325 713 aa7.97□□□□□ -1.13
LINC01049-201ENST00000426840 FGFR1OPO95684 399 aaKnown RBP7.97□□□□□ -1.13
LINC01049-201ENST00000426840 GNA14O95837 355 aa7.97□□□□□ -1.13
LINC01049-201ENST00000426840 KRT19P08727 400 aa7.97□□□□□ -1.13
LINC01049-201ENST00000426840 FOSL2P15408 326 aa7.97□□□□□ -1.13
LINC01049-201ENST00000426840 TKTP29401 623 aaKnown RBP7.97□□□□□ -1.13
LINC01049-201ENST00000426840 PNPLA4P41247 253 aa7.97□□□□□ -1.13
LINC01049-201ENST00000426840 GCLMP48507 274 aa7.97□□□□□ -1.13
LINC01049-201ENST00000426840 GLUD2P49448 558 aa7.97□□□□□ -1.13
LINC01049-201ENST00000426840 TAF6P49848 677 aa7.97□□□□□ -1.13
LINC01049-201ENST00000426840 MYL6P60660 151 aa7.97□□□□□ -1.13
LINC01049-201ENST00000426840 SMC1AQ14683 1233 aaKnown RBP7.97□□□□□ -1.13
LINC01049-201ENST00000426840 NCAPHQ15003 741 aa7.97□□□□□ -1.13
LINC01049-201ENST00000426840 PTPN14Q15678 1187 aa7.97□□□□□ -1.13
LINC01049-201ENST00000426840 MAP7D1Q3KQU3 841 aa7.97□□□□□ -1.13
LINC01049-201ENST00000426840 TCEAL5Q5H9L2 206 aa7.97□□□□□ -1.13
LINC01049-201ENST00000426840 LCE2CQ5TA81 110 aa7.97□□□□□ -1.13
LINC01049-201ENST00000426840 PLPP4Q5VZY2 271 aa7.97□□□□□ -1.13
LINC01049-201ENST00000426840 DSTYKQ6XUX3 929 aa7.97□□□□□ -1.13
LINC01049-201ENST00000426840 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.97□□□□□ -1.13
LINC01049-201ENST00000426840 LYSMD3Q7Z3D4 306 aa7.97□□□□□ -1.13
LINC01049-201ENST00000426840 LIMS2Q7Z4I7 341 aa7.97□□□□□ -1.13
LINC01049-201ENST00000426840 CEP57Q86XR8 500 aa7.97□□□□□ -1.13
LINC01049-201ENST00000426840 PIK3R5Q8WYR1 880 aa7.97□□□□□ -1.13
LINC01049-201ENST00000426840 SLC35C1Q96A29 364 aa7.97□□□□□ -1.13
LINC01049-201ENST00000426840 HPDLQ96IR7 371 aa7.97□□□□□ -1.13
LINC01049-201ENST00000426840 KLHL5Q96PQ7 755 aa7.97□□□□□ -1.13
LINC01049-201ENST00000426840 CLSTN3Q9BQT9 956 aa7.97□□□□□ -1.13
LINC01049-201ENST00000426840 TTPALQ9BTX7 342 aa7.97□□□□□ -1.13
LINC01049-201ENST00000426840 XYLT2Q9H1B5 865 aa7.97□□□□□ -1.13
LINC01049-201ENST00000426840 DNAJC25Q9H1X3 360 aa7.97□□□□□ -1.13
LINC01049-201ENST00000426840 THAP9Q9H5L6 903 aa7.97□□□□□ -1.13
LINC01049-201ENST00000426840 NSUN3Q9H649 340 aaKnown RBP7.97□□□□□ -1.13
LINC01049-201ENST00000426840 MRPL17Q9NRX2 175 aaKnown RBP7.97□□□□□ -1.13
LINC01049-201ENST00000426840 SAMSN1Q9NSI8 373 aaKnown RBP7.97□□□□□ -1.13
LINC01049-201ENST00000426840 GDAP2Q9NXN4 497 aa7.97□□□□□ -1.13
LINC01049-201ENST00000426840 ARMCX3Q9UH62 379 aaPredicted RBP7.97□□□□□ -1.13
LINC01049-201ENST00000426840 TIMM13Q9Y5L4 95 aaPredicted RBP7.97□□□□□ -1.13
LINC01049-201ENST00000426840 COL4A4P53420 1690 aaPredicted RBP7.96□□□□□ -1.13
LINC01049-201ENST00000426840 H3BM21 787 aa7.96□□□□□ -1.14
LINC01049-201ENST00000426840 C2CD2LO14523 706 aa7.96□□□□□ -1.14
LINC01049-201ENST00000426840 CYB561D2O14569 222 aa7.96□□□□□ -1.14
LINC01049-201ENST00000426840 PER2O15055 1255 aa7.96□□□□□ -1.14
LINC01049-201ENST00000426840 PMM2O15305 246 aa7.96□□□□□ -1.14
LINC01049-201ENST00000426840 TEX28O15482 410 aa7.96□□□□□ -1.14
LINC01049-201ENST00000426840 CLASP2O75122 1294 aaKnown RBP7.96□□□□□ -1.14
LINC01049-201ENST00000426840 PHACTR2O75167 634 aa7.96□□□□□ -1.14
LINC01049-201ENST00000426840 OAZ2O95190 189 aa7.96□□□□□ -1.14
LINC01049-201ENST00000426840 CSPG5O95196 566 aa7.96□□□□□ -1.14
LINC01049-201ENST00000426840 IL2RAP01589 272 aa7.96□□□□□ -1.14
LINC01049-201ENST00000426840 HLA-DRAP01903 254 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms