RNA–Protein interactions for RNA: ENST00000426248.7

PKP4-205, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 4,134 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-205ENST00000426248 VAMP7P51809 220 aa16.82■□□□□ 0.28
PKP4-205ENST00000426248 KCTD17Q8N5Z5 321 aa16.82■□□□□ 0.28
PKP4-205ENST00000426248 ANKRD27Q96NW4 1050 aa16.82■□□□□ 0.28
PKP4-205ENST00000426248 TRAPPC9Q96Q05 1148 aa16.82■□□□□ 0.28
PKP4-205ENST00000426248 ERGIC2Q96RQ1 377 aa16.82■□□□□ 0.28
PKP4-205ENST00000426248 OLFML3Q9NRN5 406 aa16.82■□□□□ 0.28
PKP4-205ENST00000426248 EMSYQ7Z589 1322 aa16.82■□□□□ 0.28
PKP4-205ENST00000426248 CA8P35219 290 aa16.82■□□□□ 0.28
PKP4-205ENST00000426248 DNAJC3Q13217 504 aa16.82■□□□□ 0.28
PKP4-205ENST00000426248 MTA1Q13330 715 aa16.82■□□□□ 0.28
PKP4-205ENST00000426248 ZNF572Q7Z3I7 529 aaPredicted RBP16.82■□□□□ 0.28
PKP4-205ENST00000426248 CENPTQ96BT3 561 aa16.82■□□□□ 0.28
PKP4-205ENST00000426248 SENP7Q9BQF6 1050 aa16.82■□□□□ 0.28
PKP4-205ENST00000426248 TINF2Q9BSI4 451 aa16.82■□□□□ 0.28
PKP4-205ENST00000426248 DDX18Q9NVP1 670 aaKnown RBP16.82■□□□□ 0.28
PKP4-205ENST00000426248 SMCHD1A6NHR9 2005 aa16.81■□□□□ 0.28
PKP4-205ENST00000426248 NFX1Q12986 1120 aaKnown RBP16.81■□□□□ 0.28
PKP4-205ENST00000426248 GNASQ5JWF2 1037 aa16.81■□□□□ 0.28
PKP4-205ENST00000426248 ALKBH5Q6P6C2 394 aaKnown RBP16.81■□□□□ 0.28
PKP4-205ENST00000426248 ADPGKQ9BRR6 497 aa16.81■□□□□ 0.28
PKP4-205ENST00000426248 YIPF2Q9BWQ6 316 aa16.81■□□□□ 0.28
PKP4-205ENST00000426248 PDP2Q9P2J9 529 aa16.81■□□□□ 0.28
PKP4-205ENST00000426248 TBX20Q9UMR3 447 aa16.81■□□□□ 0.28
PKP4-205ENST00000426248 MAP1BP46821 2468 aaKnown RBP16.81■□□□□ 0.28
PKP4-205ENST00000426248 GYG2O15488 501 aa16.81■□□□□ 0.28
PKP4-205ENST00000426248 IL9RQ01113 521 aa16.81■□□□□ 0.28
PKP4-205ENST00000426248 CNGA2Q16280 664 aa16.81■□□□□ 0.28
PKP4-205ENST00000426248 ANKRD23Q86SG2 305 aa16.81■□□□□ 0.28
PKP4-205ENST00000426248 ATXN2LQ8WWM7 1075 aaKnown RBP16.81■□□□□ 0.28
PKP4-205ENST00000426248 TBC1D10AQ9BXI6 508 aa16.81■□□□□ 0.28
PKP4-205ENST00000426248 DCLRE1BQ9H816 532 aa16.81■□□□□ 0.28
PKP4-205ENST00000426248 FAF1Q9UNN5 650 aaPredicted RBP16.81■□□□□ 0.28
PKP4-205ENST00000426248 CFAP69A5D8W1 941 aa16.81■□□□□ 0.28
PKP4-205ENST00000426248 NKRFO15226 690 aaKnown RBP eCLIP16.81■□□□□ 0.287e-8■□□□□ 10.2
PKP4-205ENST00000426248 SPAG7O75391 227 aa16.81■□□□□ 0.28
PKP4-205ENST00000426248 TMEM191BP0C7N4 346 aa16.81■□□□□ 0.28
PKP4-205ENST00000426248 ACADSP16219 412 aa16.81■□□□□ 0.28
PKP4-205ENST00000426248 MMP13P45452 471 aa16.81■□□□□ 0.28
PKP4-205ENST00000426248 ACVR2BQ13705 512 aa16.81■□□□□ 0.28
PKP4-205ENST00000426248 SLC44A4Q53GD3 710 aa16.81■□□□□ 0.28
PKP4-205ENST00000426248 ARHGEF18Q6ZSZ5 1173 aa16.81■□□□□ 0.28
PKP4-205ENST00000426248 SMC1BQ8NDV3 1235 aa16.81■□□□□ 0.28
PKP4-205ENST00000426248 MPP4Q96JB8 637 aa16.81■□□□□ 0.28
PKP4-205ENST00000426248 SLITRK6Q9H5Y7 841 aa16.81■□□□□ 0.28
PKP4-205ENST00000426248 RPTORQ8N122 1335 aa16.81■□□□□ 0.28
PKP4-205ENST00000426248 A0A1W2PQJ5 194 aa16.81■□□□□ 0.28
PKP4-205ENST00000426248 H3BRB1 525 aa16.81■□□□□ 0.28
PKP4-205ENST00000426248 H2AFZP0C0S5 128 aa16.81■□□□□ 0.28
PKP4-205ENST00000426248 MFSD14CQ5VZR4 134 aa16.81■□□□□ 0.28
PKP4-205ENST00000426248 H2AFVQ71UI9 128 aa16.81■□□□□ 0.28
PKP4-205ENST00000426248 TAB3Q8N5C8 712 aaPredicted RBP16.81■□□□□ 0.28
PKP4-205ENST00000426248 ABHD16BQ9H3Z7 469 aa16.81■□□□□ 0.28
PKP4-205ENST00000426248 TUT1Q9H6E5 874 aaKnown RBP16.81■□□□□ 0.28
PKP4-205ENST00000426248 ZFP69BQ9UJL9 534 aa16.81■□□□□ 0.28
PKP4-205ENST00000426248 AGO2Q9UKV8 859 aaKnown RBP16.81■□□□□ 0.28
PKP4-205ENST00000426248 M0QZ92 97 aa16.8■□□□□ 0.28
PKP4-205ENST00000426248 EIF3DO15371 548 aaKnown RBP eCLIP16.8■□□□□ 0.28
PKP4-205ENST00000426248 FARP2O94887 1054 aaPredicted RBP16.8■□□□□ 0.28
PKP4-205ENST00000426248 LMNAP02545 664 aaKnown RBP16.8■□□□□ 0.28
PKP4-205ENST00000426248 KRT15P19012 456 aa16.8■□□□□ 0.28
PKP4-205ENST00000426248 ZNF568Q3ZCX4 644 aa16.8■□□□□ 0.28
PKP4-205ENST00000426248 CCDC92Q53HC0 331 aaPredicted RBP16.8■□□□□ 0.28
PKP4-205ENST00000426248 CELF3Q5SZQ8 465 aaKnown RBP16.8■□□□□ 0.28
PKP4-205ENST00000426248 FRMD5Q7Z6J6 570 aa16.8■□□□□ 0.28
PKP4-205ENST00000426248 ETNK2Q9NVF9 386 aa16.8■□□□□ 0.28
PKP4-205ENST00000426248 THAP12O43422 761 aa16.8■□□□□ 0.28
PKP4-205ENST00000426248 PEX11AO75192 247 aa16.8■□□□□ 0.28
PKP4-205ENST00000426248 INSRRP14616 1297 aa16.8■□□□□ 0.28
PKP4-205ENST00000426248 RGS2P41220 211 aa16.8■□□□□ 0.28
PKP4-205ENST00000426248 CDK17Q00537 523 aa16.8■□□□□ 0.28
PKP4-205ENST00000426248 SLC18A3Q16572 532 aa16.8■□□□□ 0.28
PKP4-205ENST00000426248 FAM110CQ1W6H9 321 aa16.8■□□□□ 0.28
PKP4-205ENST00000426248 CBWD2Q8IUF1 395 aa16.8■□□□□ 0.28
PKP4-205ENST00000426248 TTYH3Q9C0H2 523 aa16.8■□□□□ 0.28
PKP4-205ENST00000426248 HBP1O60381 514 aa16.8■□□□□ 0.28
PKP4-205ENST00000426248 CREB1P16220 341 aa16.8■□□□□ 0.28
PKP4-205ENST00000426248 PIK3CAP42336 1068 aa16.8■□□□□ 0.28
PKP4-205ENST00000426248 TMED2Q15363 201 aa16.8■□□□□ 0.28
PKP4-205ENST00000426248 SNRNP35Q16560 246 aaKnown RBP16.8■□□□□ 0.28
PKP4-205ENST00000426248 GPAT2Q6NUI2 795 aa16.8■□□□□ 0.28
PKP4-205ENST00000426248 CATSPER4Q7RTX7 472 aa16.8■□□□□ 0.28
PKP4-205ENST00000426248 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.8■□□□□ 0.28
PKP4-205ENST00000426248 KRT36O76013 467 aa16.79■□□□□ 0.28
PKP4-205ENST00000426248 TRIP13Q15645 432 aaPredicted RBP16.79■□□□□ 0.28
PKP4-205ENST00000426248 DGKDQ16760 1214 aa16.79■□□□□ 0.28
PKP4-205ENST00000426248 ZCWPW2Q504Y3 356 aa16.79■□□□□ 0.28
PKP4-205ENST00000426248 ABHD15Q6UXT9 468 aa16.79■□□□□ 0.28
PKP4-205ENST00000426248 SPIRE2Q8WWL2 714 aa16.79■□□□□ 0.28
PKP4-205ENST00000426248 TIPINQ9BVW5 301 aa16.79■□□□□ 0.28
PKP4-205ENST00000426248 C1orf112Q9NSG2 853 aa16.79■□□□□ 0.28
PKP4-205ENST00000426248 CLIC5Q9NZA1 410 aa16.79■□□□□ 0.28
PKP4-205ENST00000426248 LRRC42Q9Y546 428 aa16.79■□□□□ 0.28
PKP4-205ENST00000426248 RGS20O76081 388 aa16.79■□□□□ 0.28
PKP4-205ENST00000426248 GJB1P08034 283 aa16.79■□□□□ 0.28
PKP4-205ENST00000426248 SESTD1Q86VW0 696 aa16.79■□□□□ 0.28
PKP4-205ENST00000426248 EXOC8Q8IYI6 725 aa16.79■□□□□ 0.28
PKP4-205ENST00000426248 DNAJC1Q96KC8 554 aaKnown RBP16.79■□□□□ 0.28
PKP4-205ENST00000426248 SIKE1Q9BRV8 207 aa16.79■□□□□ 0.28
PKP4-205ENST00000426248 DNAJC12Q9UKB3 198 aa16.79■□□□□ 0.28
PKP4-205ENST00000426248 ADAMTS5Q9UNA0 930 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms