RNA–Protein interactions for RNA: ENST00000425836.6

VEGFA-209, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-209ENST00000425836 SRGAP2BP0DMP2 458 aa26.17■■□□□ 1.78
VEGFA-209ENST00000425836 ATP1A3P13637 1013 aa26.17■■□□□ 1.78
VEGFA-209ENST00000425836 PCSK1P29120 753 aa26.17■■□□□ 1.78
VEGFA-209ENST00000425836 LRMPQ12912 555 aa26.17■■□□□ 1.78
VEGFA-209ENST00000425836 TPGS2Q68CL5 300 aa26.17■■□□□ 1.78
VEGFA-209ENST00000425836 INTS2Q9H0H0 1204 aaKnown RBP26.17■■□□□ 1.78
VEGFA-209ENST00000425836 VPS16Q9H269 839 aa26.17■■□□□ 1.78
VEGFA-209ENST00000425836 TSPY26PQ9H489 355 aa26.17■■□□□ 1.78
VEGFA-209ENST00000425836 AFF4Q9UHB7 1163 aaKnown RBP26.17■■□□□ 1.78
VEGFA-209ENST00000425836 GTPBP10A4D1E9 387 aaKnown RBP26.16■■□□□ 1.78
VEGFA-209ENST00000425836 LRRC10BA6NIK2 292 aa26.16■■□□□ 1.78
VEGFA-209ENST00000425836 ATF2P15336 505 aa26.16■■□□□ 1.78
VEGFA-209ENST00000425836 ZNF445P59923 1031 aa26.16■■□□□ 1.78
VEGFA-209ENST00000425836 TSPY1Q01534 308 aa26.16■■□□□ 1.78
VEGFA-209ENST00000425836 ANKRD54Q6NXT1 300 aa26.16■■□□□ 1.78
VEGFA-209ENST00000425836 ANKRD20A12PQ8NF67 263 aa26.16■■□□□ 1.78
VEGFA-209ENST00000425836 FAM200AQ8TCP9 573 aa26.16■■□□□ 1.78
VEGFA-209ENST00000425836 HDAC7Q8WUI4 952 aa26.16■■□□□ 1.78
VEGFA-209ENST00000425836 PLEKHA4Q9H4M7 779 aa26.16■■□□□ 1.78
VEGFA-209ENST00000425836 GCNT4Q9P109 453 aa26.16■■□□□ 1.78
VEGFA-209ENST00000425836 CDH9Q9ULB4 789 aa26.16■■□□□ 1.78
VEGFA-209ENST00000425836 A8MXQ7 604 aa26.16■■□□□ 1.78
VEGFA-209ENST00000425836 PES1O00541 588 aaKnown RBP26.16■■□□□ 1.78
VEGFA-209ENST00000425836 VNN2O95498 520 aa26.16■■□□□ 1.78
VEGFA-209ENST00000425836 SLC39A12Q504Y0 691 aa26.16■■□□□ 1.78
VEGFA-209ENST00000425836 INTS6LQ5JSJ4 861 aaKnown RBP26.16■■□□□ 1.78
VEGFA-209ENST00000425836 GBP6Q6ZN66 633 aa26.16■■□□□ 1.78
VEGFA-209ENST00000425836 DCP1BQ8IZD4 617 aaKnown RBP26.16■■□□□ 1.78
VEGFA-209ENST00000425836 NT5C1BQ96P26 610 aa26.16■■□□□ 1.78
VEGFA-209ENST00000425836 PGLYRP2Q96PD5 576 aa26.16■■□□□ 1.78
VEGFA-209ENST00000425836 PKMYT1Q99640 499 aa26.16■■□□□ 1.78
VEGFA-209ENST00000425836 ARID3AQ99856 593 aa26.16■■□□□ 1.78
VEGFA-209ENST00000425836 SYT15Q9BQS2 421 aa26.16■■□□□ 1.78
VEGFA-209ENST00000425836 TMLHEQ9NVH6 421 aa26.16■■□□□ 1.78
VEGFA-209ENST00000425836 DZANK1Q9NVP4 752 aa26.16■■□□□ 1.78
VEGFA-209ENST00000425836 DPP7Q9UHL4 492 aa26.16■■□□□ 1.78
VEGFA-209ENST00000425836 COG5Q9UP83 839 aa26.16■■□□□ 1.78
VEGFA-209ENST00000425836 TSC2P49815 1807 aa26.15■■□□□ 1.78
VEGFA-209ENST00000425836 ATP2C2O75185 946 aa26.15■■□□□ 1.78
VEGFA-209ENST00000425836 SLC9A1P19634 815 aa26.15■■□□□ 1.78
VEGFA-209ENST00000425836 KCNA5P22460 613 aa26.15■■□□□ 1.78
VEGFA-209ENST00000425836 COPB1P53618 953 aaKnown RBP26.15■■□□□ 1.78
VEGFA-209ENST00000425836 ADCY1Q08828 1119 aa26.15■■□□□ 1.78
VEGFA-209ENST00000425836 EXOC3L4Q17RC7 722 aa26.15■■□□□ 1.78
VEGFA-209ENST00000425836 SYCE2Q6PIF2 218 aa26.15■■□□□ 1.78
VEGFA-209ENST00000425836 APTXQ7Z2E3 356 aaKnown RBP26.15■■□□□ 1.78
VEGFA-209ENST00000425836 MSLNLQ96KJ4 702 aa26.15■■□□□ 1.78
VEGFA-209ENST00000425836 H3BQ06 376 aaPredicted RBP26.14■■□□□ 1.78
VEGFA-209ENST00000425836 SEC24AO95486 1093 aa26.14■■□□□ 1.78
VEGFA-209ENST00000425836 CDR1P51861 262 aa26.14■■□□□ 1.78
VEGFA-209ENST00000425836 PSMC1P62191 440 aaKnown RBP26.14■■□□□ 1.78
VEGFA-209ENST00000425836 INCA1Q0VD86 236 aa26.14■■□□□ 1.78
VEGFA-209ENST00000425836 CUL2Q13617 745 aa26.14■■□□□ 1.78
VEGFA-209ENST00000425836 CCDC142Q17RM4 750 aa26.14■■□□□ 1.78
VEGFA-209ENST00000425836 C12orf76Q8N812 135 aaPredicted RBP26.14■■□□□ 1.78
VEGFA-209ENST00000425836 ATAD1Q8NBU5 361 aa26.14■■□□□ 1.78
VEGFA-209ENST00000425836 DPEP3Q9H4B8 488 aa26.14■■□□□ 1.78
VEGFA-209ENST00000425836 GTF3C4Q9UKN8 822 aa26.14■■□□□ 1.78
VEGFA-209ENST00000425836 MAFFQ9ULX9 164 aa26.14■■□□□ 1.78
VEGFA-209ENST00000425836 MYBPHLA2RUH7 354 aa26.13■■□□□ 1.77
VEGFA-209ENST00000425836 MTMR11A4FU01 709 aa26.13■■□□□ 1.77
VEGFA-209ENST00000425836 TPM2P07951 284 aa26.13■■□□□ 1.77
VEGFA-209ENST00000425836 HOXB8P17481 243 aaPredicted RBP26.13■■□□□ 1.77
VEGFA-209ENST00000425836 CD58P19256 250 aa26.13■■□□□ 1.77
VEGFA-209ENST00000425836 PON1P27169 355 aa26.13■■□□□ 1.77
VEGFA-209ENST00000425836 NDST1P52848 882 aa26.13■■□□□ 1.77
VEGFA-209ENST00000425836 FAM171BQ6P995 826 aa26.13■■□□□ 1.77
VEGFA-209ENST00000425836 ARHGEF19Q8IW93 802 aa26.13■■□□□ 1.77
VEGFA-209ENST00000425836 CRTAC1Q9NQ79 661 aa26.13■■□□□ 1.77
VEGFA-209ENST00000425836 HMGXB4Q9UGU5 601 aa26.13■■□□□ 1.77
VEGFA-209ENST00000425836 ELF1P32519 619 aa26.12■■□□□ 1.77
VEGFA-209ENST00000425836 SMARCB1Q12824 385 aa26.12■■□□□ 1.77
VEGFA-209ENST00000425836 PHLDB3Q6NSJ2 640 aa26.12■■□□□ 1.77
VEGFA-209ENST00000425836 TRIM65Q6PJ69 517 aa26.12■■□□□ 1.77
VEGFA-209ENST00000425836 ELMSAN1Q6PJG2 1045 aa26.12■■□□□ 1.77
VEGFA-209ENST00000425836 UNC93AQ86WB7 457 aa26.12■■□□□ 1.77
VEGFA-209ENST00000425836 TCEAL8Q8IYN2 117 aa26.12■■□□□ 1.77
VEGFA-209ENST00000425836 CRISPLD1Q9H336 500 aa26.12■■□□□ 1.77
VEGFA-209ENST00000425836 CYP4F11Q9HBI6 524 aa26.12■■□□□ 1.77
VEGFA-209ENST00000425836 COL6A3P12111 3177 aa26.12■■□□□ 1.77
VEGFA-209ENST00000425836 CILPO75339 1184 aa26.12■■□□□ 1.77
VEGFA-209ENST00000425836 RFPL2O75678 378 aa26.12■■□□□ 1.77
VEGFA-209ENST00000425836 ZMYND10O75800 440 aa26.12■■□□□ 1.77
VEGFA-209ENST00000425836 C8AP07357 584 aa26.12■■□□□ 1.77
VEGFA-209ENST00000425836 PTPN1P18031 435 aaKnown RBP26.12■■□□□ 1.77
VEGFA-209ENST00000425836 TBXAS1P24557 533 aaPredicted RBP26.12■■□□□ 1.77
VEGFA-209ENST00000425836 KCNMA1Q12791 1236 aa26.12■■□□□ 1.77
VEGFA-209ENST00000425836 CLUL1Q15846 466 aa26.12■■□□□ 1.77
VEGFA-209ENST00000425836 UVSSAQ2YD98 709 aa26.12■■□□□ 1.77
VEGFA-209ENST00000425836 LIN9Q5TKA1 542 aa26.12■■□□□ 1.77
VEGFA-209ENST00000425836 RRAGAQ7L523 313 aa26.12■■□□□ 1.77
VEGFA-209ENST00000425836 PPM1KQ8N3J5 372 aa26.12■■□□□ 1.77
VEGFA-209ENST00000425836 SLC7A14Q8TBB6 771 aa26.12■■□□□ 1.77
VEGFA-209ENST00000425836 WHAMMQ8TF30 809 aa26.12■■□□□ 1.77
VEGFA-209ENST00000425836 KAT5Q92993 513 aa26.12■■□□□ 1.77
VEGFA-209ENST00000425836 LPIN3Q9BQK8 851 aa26.12■■□□□ 1.77
VEGFA-209ENST00000425836 APOL5Q9BWW9 433 aa26.12■■□□□ 1.77
VEGFA-209ENST00000425836 S1PR5Q9H228 398 aa26.12■■□□□ 1.77
VEGFA-209ENST00000425836 CISHQ9NSE2 258 aa26.12■■□□□ 1.77
VEGFA-209ENST00000425836 SPDYE4A6NLX3 237 aa26.11■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms