RNA–Protein interactions for RNA: ENST00000425718.1

APOE-202, Transcript of apolipoprotein E, humanhuman

TSL 1 (best)

Gene APOE, Length 923 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-202ENST00000425718 MTCH2Q9Y6C9 303 aa25.71■■□□□ 1.71
APOE-202ENST00000425718 CDY1Q9Y6F8 540 aa25.71■■□□□ 1.71
APOE-202ENST00000425718 TEX28O15482 410 aa25.7■■□□□ 1.7
APOE-202ENST00000425718 LRRN2O75325 713 aa25.7■■□□□ 1.7
APOE-202ENST00000425718 CILPO75339 1184 aa25.7■■□□□ 1.7
APOE-202ENST00000425718 UCHL3P15374 230 aa25.7■■□□□ 1.7
APOE-202ENST00000425718 IGFBP4P22692 258 aa25.7■■□□□ 1.7
APOE-202ENST00000425718 CDH8P55286 799 aa25.7■■□□□ 1.7
APOE-202ENST00000425718 INTS6LQ5JSJ4 861 aaKnown RBP25.7■■□□□ 1.7
APOE-202ENST00000425718 HDAC7Q8WUI4 952 aa25.7■■□□□ 1.7
APOE-202ENST00000425718 SYT15Q9BQS2 421 aa25.7■■□□□ 1.7
APOE-202ENST00000425718 CLSTN3Q9BQT9 956 aa25.7■■□□□ 1.7
APOE-202ENST00000425718 ZCWPW1Q9H0M4 648 aa25.7■■□□□ 1.7
APOE-202ENST00000425718 ATP8B3O60423 1300 aa25.69■■□□□ 1.7
APOE-202ENST00000425718 HIDE1A8MVS5 230 aa25.69■■□□□ 1.7
APOE-202ENST00000425718 TEX33O43247 280 aa25.69■■□□□ 1.7
APOE-202ENST00000425718 GLUD1P00367 558 aa25.69■■□□□ 1.7
APOE-202ENST00000425718 OR1D2P34982 312 aa25.69■■□□□ 1.7
APOE-202ENST00000425718 RAP1GAPP47736 663 aa25.69■■□□□ 1.7
APOE-202ENST00000425718 GPR17Q13304 367 aa25.69■■□□□ 1.7
APOE-202ENST00000425718 DUSP6Q16828 381 aa25.69■■□□□ 1.7
APOE-202ENST00000425718 C4orf50Q6ZRC1 276 aa25.69■■□□□ 1.7
APOE-202ENST00000425718 RRAGAQ7L523 313 aa25.69■■□□□ 1.7
APOE-202ENST00000425718 ARHGEF19Q8IW93 802 aa25.69■■□□□ 1.7
APOE-202ENST00000425718 EDEM3Q9BZQ6 932 aa25.69■■□□□ 1.7
APOE-202ENST00000425718 TRIM5Q9C035 493 aa25.69■■□□□ 1.7
APOE-202ENST00000425718 XPO4Q9C0E2 1151 aaKnown RBP25.69■■□□□ 1.7
APOE-202ENST00000425718 SIX2Q9NPC8 291 aa25.69■■□□□ 1.7
APOE-202ENST00000425718 HSFX1Q9UBD0 423 aa25.69■■□□□ 1.7
APOE-202ENST00000425718 DNAJC12Q9UKB3 198 aa25.69■■□□□ 1.7
APOE-202ENST00000425718 KIAA1257Q9ULG3 409 aa25.69■■□□□ 1.7
APOE-202ENST00000425718 CD58P19256 250 aa25.68■■□□□ 1.7
APOE-202ENST00000425718 NDST1P52848 882 aa25.68■■□□□ 1.7
APOE-202ENST00000425718 OSTM1Q86WC4 334 aa25.68■■□□□ 1.7
APOE-202ENST00000425718 CRYBG2Q8N1P7 616 aa25.68■■□□□ 1.7
APOE-202ENST00000425718 B3GALNT2Q8NCR0 500 aa25.68■■□□□ 1.7
APOE-202ENST00000425718 ZNF461Q8TAF7 563 aa25.68■■□□□ 1.7
APOE-202ENST00000425718 CDX2Q99626 313 aaPredicted RBP25.68■■□□□ 1.7
APOE-202ENST00000425718 SDCBP2Q9H190 292 aa25.68■■□□□ 1.7
APOE-202ENST00000425718 FAM207AQ9NSI2 230 aaPredicted RBP25.68■■□□□ 1.7
APOE-202ENST00000425718 MTMR10Q9NXD2 777 aa25.68■■□□□ 1.7
APOE-202ENST00000425718 AFF4Q9UHB7 1163 aaKnown RBP25.68■■□□□ 1.7
APOE-202ENST00000425718 PCDHB4Q9Y5E5 795 aa25.68■■□□□ 1.7
APOE-202ENST00000425718 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP25.68■■□□□ 1.7
APOE-202ENST00000425718 PLXNA3P51805 1871 aa25.68■■□□□ 1.7
APOE-202ENST00000425718 ITIH6Q6UXX5 1313 aa25.67■■□□□ 1.7
APOE-202ENST00000425718 PTPRDP23468 1912 aa25.67■■□□□ 1.7
APOE-202ENST00000425718 CSPG5O95196 566 aa25.67■■□□□ 1.7
APOE-202ENST00000425718 PAEPP09466 180 aa25.67■■□□□ 1.7
APOE-202ENST00000425718 FOSL2P15408 326 aa25.67■■□□□ 1.7
APOE-202ENST00000425718 ELF1P32519 619 aa25.67■■□□□ 1.7
APOE-202ENST00000425718 ROR1Q01973 937 aa25.67■■□□□ 1.7
APOE-202ENST00000425718 TRIM14Q14142 442 aa25.67■■□□□ 1.7
APOE-202ENST00000425718 FIGNQ5HY92 759 aa25.67■■□□□ 1.7
APOE-202ENST00000425718 CACNA2D4Q7Z3S7 1137 aa25.67■■□□□ 1.7
APOE-202ENST00000425718 SPPL2BQ8TCT7 592 aa25.67■■□□□ 1.7
APOE-202ENST00000425718 FUBP3Q96I24 572 aaKnown RBP eCLIP25.67■■□□□ 1.7
APOE-202ENST00000425718 RTP3Q9BQQ7 232 aa25.67■■□□□ 1.7
APOE-202ENST00000425718 STK33Q9BYT3 514 aa25.67■■□□□ 1.7
APOE-202ENST00000425718 PLEKHA4Q9H4M7 779 aa25.67■■□□□ 1.7
APOE-202ENST00000425718 CEP72Q9P209 647 aa25.67■■□□□ 1.7
APOE-202ENST00000425718 MYO6Q9UM54 1294 aa25.67■■□□□ 1.7
APOE-202ENST00000425718 CLASP2O75122 1294 aaKnown RBP25.66■■□□□ 1.7
APOE-202ENST00000425718 PDGFRBP09619 1106 aa25.66■■□□□ 1.7
APOE-202ENST00000425718 PTPN1P18031 435 aaKnown RBP25.66■■□□□ 1.7
APOE-202ENST00000425718 BPIFB4P59827 614 aa25.66■■□□□ 1.7
APOE-202ENST00000425718 RAPGEF1Q13905 1077 aa25.66■■□□□ 1.7
APOE-202ENST00000425718 FAM171BQ6P995 826 aa25.66■■□□□ 1.7
APOE-202ENST00000425718 CCDC149Q6ZUS6 474 aa25.66■■□□□ 1.7
APOE-202ENST00000425718 Q7L0L9 218 aa25.66■■□□□ 1.7
APOE-202ENST00000425718 UBR7Q8N806 425 aa25.66■■□□□ 1.7
APOE-202ENST00000425718 OR10T2Q8NGX3 314 aa25.66■■□□□ 1.7
APOE-202ENST00000425718 MYCBPAPQ8TBZ2 947 aa25.66■■□□□ 1.7
APOE-202ENST00000425718 SHC3Q92529 594 aa25.66■■□□□ 1.7
APOE-202ENST00000425718 CASP10Q92851 521 aa25.66■■□□□ 1.7
APOE-202ENST00000425718 ELMO3Q96BJ8 720 aa25.66■■□□□ 1.7
APOE-202ENST00000425718 TMEM176AQ96HP8 235 aa25.66■■□□□ 1.7
APOE-202ENST00000425718 KREMEN1Q96MU8 473 aa25.66■■□□□ 1.7
APOE-202ENST00000425718 SPAG5Q96R06 1193 aa25.66■■□□□ 1.7
APOE-202ENST00000425718 ARID3AQ99856 593 aa25.66■■□□□ 1.7
APOE-202ENST00000425718 GANQ9H2C0 597 aa25.66■■□□□ 1.7
APOE-202ENST00000425718 ABCB6Q9NP58 842 aa25.66■■□□□ 1.7
APOE-202ENST00000425718 CNTN6Q9UQ52 1028 aa25.66■■□□□ 1.7
APOE-202ENST00000425718 ABLIM3O94929 683 aa25.65■■□□□ 1.7
APOE-202ENST00000425718 TPM1P09493 284 aa25.65■■□□□ 1.7
APOE-202ENST00000425718 CCDC172P0C7W6 258 aa25.65■■□□□ 1.7
APOE-202ENST00000425718 ATF2P15336 505 aa25.65■■□□□ 1.7
APOE-202ENST00000425718 RPL17P18621 184 aaKnown RBP25.65■■□□□ 1.7
APOE-202ENST00000425718 LMO2P25791 158 aa25.65■■□□□ 1.7
APOE-202ENST00000425718 NRIP1P48552 1158 aa25.65■■□□□ 1.7
APOE-202ENST00000425718 CLCN4P51793 760 aa25.65■■□□□ 1.7
APOE-202ENST00000425718 ARPP19P56211 112 aa25.65■■□□□ 1.7
APOE-202ENST00000425718 POLR2FP61218 127 aaKnown RBP25.65■■□□□ 1.7
APOE-202ENST00000425718 ADGRE1Q14246 886 aa25.65■■□□□ 1.7
APOE-202ENST00000425718 STILQ15468 1287 aa25.65■■□□□ 1.7
APOE-202ENST00000425718 ARHGAP44Q17R89 818 aa25.65■■□□□ 1.7
APOE-202ENST00000425718 SLC39A12Q504Y0 691 aa25.65■■□□□ 1.7
APOE-202ENST00000425718 TCEAL5Q5H9L2 206 aa25.65■■□□□ 1.7
APOE-202ENST00000425718 IQCEQ6IPM2 695 aa25.65■■□□□ 1.7
APOE-202ENST00000425718 TMEM270Q6UE05 265 aa25.65■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms