RNA–Protein interactions for RNA: ENST00000425516.1

CHCHD3P1-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3 pseudogene 1, humanhuman

BASIC

Gene CHCHD3P1, Length 676 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3P1-201ENST00000425516 ERVFC1P60507 584 aa7.59□□□□□ -1.19
CHCHD3P1-201ENST00000425516 KRT17Q04695 432 aa7.59□□□□□ -1.19
CHCHD3P1-201ENST00000425516 PTK2Q05397 1052 aa7.59□□□□□ -1.19
CHCHD3P1-201ENST00000425516 GPM6BQ13491 265 aa7.59□□□□□ -1.19
CHCHD3P1-201ENST00000425516 GRIN2CQ14957 1233 aa7.59□□□□□ -1.19
CHCHD3P1-201ENST00000425516 MAN2A1Q16706 1144 aa7.59□□□□□ -1.19
CHCHD3P1-201ENST00000425516 VWA3BQ502W6 1294 aa7.59□□□□□ -1.19
CHCHD3P1-201ENST00000425516 DCAF17Q5H9S7 520 aaPredicted RBP7.59□□□□□ -1.19
CHCHD3P1-201ENST00000425516 C6orf118Q5T5N4 469 aa7.59□□□□□ -1.19
CHCHD3P1-201ENST00000425516 PPP1R26Q5T8A7 1209 aaPredicted RBP7.59□□□□□ -1.19
CHCHD3P1-201ENST00000425516 KIAA0319Q5VV43 1072 aa7.59□□□□□ -1.19
CHCHD3P1-201ENST00000425516 DPY19L2P1Q6NXN4 242 aa7.59□□□□□ -1.19
CHCHD3P1-201ENST00000425516 GPR65Q8IYL9 337 aa7.59□□□□□ -1.19
CHCHD3P1-201ENST00000425516 CCDC116Q8IYX3 515 aa7.59□□□□□ -1.19
CHCHD3P1-201ENST00000425516 MEIOBQ8N635 442 aa7.59□□□□□ -1.19
CHCHD3P1-201ENST00000425516 FBXL13Q8NEE6 735 aa7.59□□□□□ -1.19
CHCHD3P1-201ENST00000425516 POF1BQ8WVV4 589 aa7.59□□□□□ -1.19
CHCHD3P1-201ENST00000425516 TAF4BQ92750 862 aa7.59□□□□□ -1.19
CHCHD3P1-201ENST00000425516 ELMO3Q96BJ8 720 aa7.59□□□□□ -1.19
CHCHD3P1-201ENST00000425516 TMEM169Q96HH4 297 aa7.59□□□□□ -1.19
CHCHD3P1-201ENST00000425516 HPDLQ96IR7 371 aa7.59□□□□□ -1.19
CHCHD3P1-201ENST00000425516 SENP8Q96LD8 212 aa7.59□□□□□ -1.19
CHCHD3P1-201ENST00000425516 C11orf84Q9BUA3 381 aaPredicted RBP7.59□□□□□ -1.19
CHCHD3P1-201ENST00000425516 HERC2P3Q9BVR0 1158 aa7.59□□□□□ -1.19
CHCHD3P1-201ENST00000425516 ZBP1Q9H171 429 aa7.59□□□□□ -1.19
CHCHD3P1-201ENST00000425516 NDST4Q9H3R1 872 aa7.59□□□□□ -1.19
CHCHD3P1-201ENST00000425516 APOBEC3GQ9HC16 384 aaKnown RBP7.59□□□□□ -1.19
CHCHD3P1-201ENST00000425516 RAB20Q9NX57 234 aa7.59□□□□□ -1.19
CHCHD3P1-201ENST00000425516 STK39Q9UEW8 545 aa7.59□□□□□ -1.19
CHCHD3P1-201ENST00000425516 NLRC5Q86WI3 1866 aa7.59□□□□□ -1.19
CHCHD3P1-201ENST00000425516 SF3B1O75533 1304 aaKnown RBP eCLIP7.58□□□□□ -1.2
CHCHD3P1-201ENST00000425516 PLXNA4Q9HCM2 1894 aa7.58□□□□□ -1.2
CHCHD3P1-201ENST00000425516 GTPBP10A4D1E9 387 aaKnown RBP7.58□□□□□ -1.2
CHCHD3P1-201ENST00000425516 BECN2A8MW95 431 aa7.58□□□□□ -1.2
CHCHD3P1-201ENST00000425516 KPNA7A9QM74 516 aa7.58□□□□□ -1.2
CHCHD3P1-201ENST00000425516 I3L4J1 428 aa7.58□□□□□ -1.2
CHCHD3P1-201ENST00000425516 CYB561D2O14569 222 aa7.58□□□□□ -1.2
CHCHD3P1-201ENST00000425516 GABRDO14764 452 aa7.58□□□□□ -1.2
CHCHD3P1-201ENST00000425516 SYN3O14994 580 aa7.58□□□□□ -1.2
CHCHD3P1-201ENST00000425516 TRAPPC3O43617 180 aa7.58□□□□□ -1.2
CHCHD3P1-201ENST00000425516 PHACTR2O75167 634 aa7.58□□□□□ -1.2
CHCHD3P1-201ENST00000425516 KRT19P08727 400 aa7.58□□□□□ -1.2
CHCHD3P1-201ENST00000425516 FAM163BP0C2L3 166 aa7.58□□□□□ -1.2
CHCHD3P1-201ENST00000425516 CTSAP10619 480 aa7.58□□□□□ -1.2
CHCHD3P1-201ENST00000425516 TYMPP19971 482 aa7.58□□□□□ -1.2
CHCHD3P1-201ENST00000425516 TKTP29401 623 aaKnown RBP7.58□□□□□ -1.2
CHCHD3P1-201ENST00000425516 IRS1P35568 1242 aa7.58□□□□□ -1.2
CHCHD3P1-201ENST00000425516 PNPLA4P41247 253 aa7.58□□□□□ -1.2
CHCHD3P1-201ENST00000425516 DSG1Q02413 1049 aa7.58□□□□□ -1.2
CHCHD3P1-201ENST00000425516 KCNMA1Q12791 1236 aa7.58□□□□□ -1.2
CHCHD3P1-201ENST00000425516 ELAVL2Q12926 359 aaKnown RBP7.58□□□□□ -1.2
CHCHD3P1-201ENST00000425516 BIRC3Q13489 604 aa7.58□□□□□ -1.2
CHCHD3P1-201ENST00000425516 ADGRE1Q14246 886 aa7.58□□□□□ -1.2
CHCHD3P1-201ENST00000425516 SOWAHAQ2M3V2 549 aa7.58□□□□□ -1.2
CHCHD3P1-201ENST00000425516 SGSM1Q2NKQ1 1148 aa7.58□□□□□ -1.2
CHCHD3P1-201ENST00000425516 USP41Q3LFD5 358 aa7.58□□□□□ -1.2
CHCHD3P1-201ENST00000425516 SV2CQ496J9 727 aa7.58□□□□□ -1.2
CHCHD3P1-201ENST00000425516 RTP2Q5QGT7 225 aa7.58□□□□□ -1.2
CHCHD3P1-201ENST00000425516 FAM171A1Q5VUB5 890 aa7.58□□□□□ -1.2
CHCHD3P1-201ENST00000425516 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.58□□□□□ -1.2
CHCHD3P1-201ENST00000425516 DPH6Q7L8W6 267 aa7.58□□□□□ -1.2
CHCHD3P1-201ENST00000425516 VPS52Q8N1B4 723 aa7.58□□□□□ -1.2
CHCHD3P1-201ENST00000425516 LNX1Q8TBB1 728 aaPredicted RBP7.58□□□□□ -1.2
CHCHD3P1-201ENST00000425516 GDPD5Q8WTR4 605 aa7.58□□□□□ -1.2
CHCHD3P1-201ENST00000425516 FAXDC2Q96IV6 333 aa7.58□□□□□ -1.2
CHCHD3P1-201ENST00000425516 B3GALT6Q96L58 329 aa7.58□□□□□ -1.2
CHCHD3P1-201ENST00000425516 ZNF560Q96MR9 790 aa7.58□□□□□ -1.2
CHCHD3P1-201ENST00000425516 PI4K2AQ9BTU6 479 aa7.58□□□□□ -1.2
CHCHD3P1-201ENST00000425516 LMAN2LQ9H0V9 348 aa7.58□□□□□ -1.2
CHCHD3P1-201ENST00000425516 RBSNQ9H1K0 784 aa7.58□□□□□ -1.2
CHCHD3P1-201ENST00000425516 VPS16Q9H269 839 aa7.58□□□□□ -1.2
CHCHD3P1-201ENST00000425516 PRDM12Q9H4Q4 367 aa7.58□□□□□ -1.2
CHCHD3P1-201ENST00000425516 MMRN2Q9H8L6 949 aa7.58□□□□□ -1.2
CHCHD3P1-201ENST00000425516 TAB2Q9NYJ8 693 aa7.58□□□□□ -1.2
CHCHD3P1-201ENST00000425516 LMCD1Q9NZU5 365 aa7.58□□□□□ -1.2
CHCHD3P1-201ENST00000425516 MAGEC2Q9UBF1 373 aaPredicted RBP7.58□□□□□ -1.2
CHCHD3P1-201ENST00000425516 PUF60Q9UHX1 559 aaKnown RBP7.58□□□□□ -1.2
CHCHD3P1-201ENST00000425516 L1RE1Q9UN81 338 aa7.58□□□□□ -1.2
CHCHD3P1-201ENST00000425516 NUB1Q9Y5A7 615 aa7.58□□□□□ -1.2
CHCHD3P1-201ENST00000425516 IRAK3Q9Y616 596 aa7.58□□□□□ -1.2
CHCHD3P1-201ENST00000425516 A0A1B0GTH6 734 aa7.57□□□□□ -1.2
CHCHD3P1-201ENST00000425516 TEX33O43247 280 aa7.57□□□□□ -1.2
CHCHD3P1-201ENST00000425516 N4BP1O75113 896 aaKnown RBP7.57□□□□□ -1.2
CHCHD3P1-201ENST00000425516 TACC1O75410 805 aa7.57□□□□□ -1.2
CHCHD3P1-201ENST00000425516 OAZ2O95190 189 aa7.57□□□□□ -1.2
CHCHD3P1-201ENST00000425516 SLC9A1P19634 815 aa7.57□□□□□ -1.2
CHCHD3P1-201ENST00000425516 PIK3CAP42336 1068 aa7.57□□□□□ -1.2
CHCHD3P1-201ENST00000425516 NOP14P78316 857 aaKnown RBP7.57□□□□□ -1.2
CHCHD3P1-201ENST00000425516 MYL7Q01449 175 aa7.57□□□□□ -1.2
CHCHD3P1-201ENST00000425516 MYO1EQ12965 1108 aa7.57□□□□□ -1.2
CHCHD3P1-201ENST00000425516 TRPC3Q13507 836 aa7.57□□□□□ -1.2
CHCHD3P1-201ENST00000425516 NR1I3Q14994 352 aa7.57□□□□□ -1.2
CHCHD3P1-201ENST00000425516 PTPN14Q15678 1187 aa7.57□□□□□ -1.2
CHCHD3P1-201ENST00000425516 ZNF699Q32M78 642 aa7.57□□□□□ -1.2
CHCHD3P1-201ENST00000425516 WDR72Q3MJ13 1102 aa7.57□□□□□ -1.2
CHCHD3P1-201ENST00000425516 SPOPLQ6IQ16 392 aa7.57□□□□□ -1.2
CHCHD3P1-201ENST00000425516 PDE12Q6L8Q7 609 aaKnown RBP7.57□□□□□ -1.2
CHCHD3P1-201ENST00000425516 RSPO2Q6UXX9 243 aaPredicted RBP7.57□□□□□ -1.2
CHCHD3P1-201ENST00000425516 DSTYKQ6XUX3 929 aa7.57□□□□□ -1.2
CHCHD3P1-201ENST00000425516 Q7L0L9 218 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms