RNA–Protein interactions for RNA: ENST00000424674.1

SF3B1-205, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 723 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-205ENST00000424674 ERV3-1Q14264 604 aa4.1□□□□□ -1.75
SF3B1-205ENST00000424674 PLS1Q14651 629 aa4.1□□□□□ -1.75
SF3B1-205ENST00000424674 ICAM4Q14773 271 aa4.1□□□□□ -1.75
SF3B1-205ENST00000424674 PPP2R5BQ15173 497 aa4.1□□□□□ -1.75
SF3B1-205ENST00000424674 ZKSCAN8Q15776 578 aaPredicted RBP4.1□□□□□ -1.75
SF3B1-205ENST00000424674 SETMARQ53H47 684 aaPredicted RBP4.1□□□□□ -1.75
SF3B1-205ENST00000424674 KRTCAP3Q53RY4 240 aa4.1□□□□□ -1.75
SF3B1-205ENST00000424674 CREB3L3Q68CJ9 461 aa4.1□□□□□ -1.75
SF3B1-205ENST00000424674 HAUS3Q68CZ6 603 aa4.1□□□□□ -1.75
SF3B1-205ENST00000424674 SLFN13Q68D06 897 aa4.1□□□□□ -1.75
SF3B1-205ENST00000424674 GPR139Q6DWJ6 353 aa4.1□□□□□ -1.75
SF3B1-205ENST00000424674 UNC45BQ8IWX7 931 aa4.1□□□□□ -1.75
SF3B1-205ENST00000424674 NUP93Q8N1F7 819 aa4.1□□□□□ -1.75
SF3B1-205ENST00000424674 THEMISQ8N1K5 641 aaPredicted RBP4.1□□□□□ -1.75
SF3B1-205ENST00000424674 ZNF610Q8N9Z0 462 aa4.1□□□□□ -1.75
SF3B1-205ENST00000424674 AVL9Q8NBF6 648 aa4.1□□□□□ -1.75
SF3B1-205ENST00000424674 PCDH19Q8TAB3 1148 aa4.1□□□□□ -1.75
SF3B1-205ENST00000424674 SPPL3Q8TCT6 385 aa4.1□□□□□ -1.75
SF3B1-205ENST00000424674 SH3RF2Q8TEC5 729 aa4.1□□□□□ -1.75
SF3B1-205ENST00000424674 RSAD2Q8WXG1 361 aa4.1□□□□□ -1.75
SF3B1-205ENST00000424674 HERVK_113Q902F9 699 aa4.1□□□□□ -1.75
SF3B1-205ENST00000424674 TAF4BQ92750 862 aa4.1□□□□□ -1.75
SF3B1-205ENST00000424674 RRP36Q96EU6 259 aaKnown RBP4.1□□□□□ -1.75
SF3B1-205ENST00000424674 ZNF845Q96IR2 970 aaPredicted RBP4.1□□□□□ -1.75
SF3B1-205ENST00000424674 PPP1R9BQ96SB3 815 aa4.1□□□□□ -1.75
SF3B1-205ENST00000424674 CGRRF1Q99675 332 aa4.1□□□□□ -1.75
SF3B1-205ENST00000424674 GPATCH1Q9BRR8 931 aaKnown RBP4.1□□□□□ -1.75
SF3B1-205ENST00000424674 LRFN3Q9BTN0 628 aa4.1□□□□□ -1.75
SF3B1-205ENST00000424674 ZDHHC5Q9C0B5 715 aa4.1□□□□□ -1.75
SF3B1-205ENST00000424674 VPS33BQ9H267 617 aa4.1□□□□□ -1.75
SF3B1-205ENST00000424674 SPON1Q9HCB6 807 aa4.1□□□□□ -1.75
SF3B1-205ENST00000424674 KCND1Q9NSA2 647 aa4.1□□□□□ -1.75
SF3B1-205ENST00000424674 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.1□□□□□ -1.75
SF3B1-205ENST00000424674 PIH1D1Q9NWS0 290 aaKnown RBP4.1□□□□□ -1.75
SF3B1-205ENST00000424674 H2AFY2Q9P0M6 372 aaPredicted RBP4.1□□□□□ -1.75
SF3B1-205ENST00000424674 CTNNA3Q9UI47 895 aa4.1□□□□□ -1.75
SF3B1-205ENST00000424674 GTF3C4Q9UKN8 822 aa4.1□□□□□ -1.75
SF3B1-205ENST00000424674 CBLCQ9ULV8 474 aa4.1□□□□□ -1.75
SF3B1-205ENST00000424674 STXBP5LQ9Y2K9 1186 aa4.1□□□□□ -1.75
SF3B1-205ENST00000424674 COQ6Q9Y2Z9 468 aa4.1□□□□□ -1.75
SF3B1-205ENST00000424674 USP19O94966 1318 aa4.1□□□□□ -1.75
SF3B1-205ENST00000424674 PASKQ96RG2 1323 aa4.1□□□□□ -1.75
SF3B1-205ENST00000424674 TDRD9Q8NDG6 1382 aaKnown RBP4.1□□□□□ -1.75
SF3B1-205ENST00000424674 KDM1AO60341 852 aa4.09□□□□□ -1.75
SF3B1-205ENST00000424674 B4GALT4O60513 344 aa4.09□□□□□ -1.75
SF3B1-205ENST00000424674 TGDSO95455 350 aa4.09□□□□□ -1.75
SF3B1-205ENST00000424674 SLC4A1P02730 911 aa4.09□□□□□ -1.75
SF3B1-205ENST00000424674 CKMP06732 381 aa4.09□□□□□ -1.75
SF3B1-205ENST00000424674 ENO2P09104 434 aaPredicted RBP4.09□□□□□ -1.75
SF3B1-205ENST00000424674 HARSP12081 509 aaKnown RBP4.09□□□□□ -1.75
SF3B1-205ENST00000424674 KRT13P13646 458 aa4.09□□□□□ -1.75
SF3B1-205ENST00000424674 PDE6AP16499 860 aa4.09□□□□□ -1.75
SF3B1-205ENST00000424674 HOXD13P35453 343 aa4.09□□□□□ -1.75
SF3B1-205ENST00000424674 SERPINF1P36955 418 aa4.09□□□□□ -1.75
SF3B1-205ENST00000424674 CD86P42081 329 aa4.09□□□□□ -1.75
SF3B1-205ENST00000424674 POLD2P49005 469 aa4.09□□□□□ -1.75
SF3B1-205ENST00000424674 CLCN2P51788 898 aa4.09□□□□□ -1.75
SF3B1-205ENST00000424674 SLC5A3P53794 718 aa4.09□□□□□ -1.75
SF3B1-205ENST00000424674 SH3BGRP55822 239 aaPredicted RBP4.09□□□□□ -1.75
SF3B1-205ENST00000424674 JAM2P57087 298 aa4.09□□□□□ -1.75
SF3B1-205ENST00000424674 ZXDAP98168 799 aa4.09□□□□□ -1.75
SF3B1-205ENST00000424674 IFT88Q13099 833 aa4.09□□□□□ -1.75
SF3B1-205ENST00000424674 PAK1Q13153 545 aa4.09□□□□□ -1.75
SF3B1-205ENST00000424674 PTK2BQ14289 1009 aa4.09□□□□□ -1.75
SF3B1-205ENST00000424674 WTAPQ15007 396 aa4.09□□□□□ -1.75
SF3B1-205ENST00000424674 ZNF174Q15697 407 aa4.09□□□□□ -1.75
SF3B1-205ENST00000424674 SLC35G1Q2M3R5 365 aa4.09□□□□□ -1.75
SF3B1-205ENST00000424674 MEX3CQ5U5Q3 659 aaKnown RBP4.09□□□□□ -1.75
SF3B1-205ENST00000424674 JMJD6Q6NYC1 403 aaPredicted RBP4.09□□□□□ -1.75
SF3B1-205ENST00000424674 RPUSD3Q6P087 351 aaKnown RBP4.09□□□□□ -1.75
SF3B1-205ENST00000424674 GGT6Q6P531 493 aa4.09□□□□□ -1.75
SF3B1-205ENST00000424674 C11orf88Q6PI97 169 aa4.09□□□□□ -1.75
SF3B1-205ENST00000424674 ARHGAP36Q6ZRI8 547 aa4.09□□□□□ -1.75
SF3B1-205ENST00000424674 Q6ZUG5 572 aa4.09□□□□□ -1.75
SF3B1-205ENST00000424674 FRMD7Q6ZUT3 714 aa4.09□□□□□ -1.75
SF3B1-205ENST00000424674 B4GALNT4Q76KP1 1039 aa4.09□□□□□ -1.75
SF3B1-205ENST00000424674 PRPF39Q86UA1 669 aaKnown RBP4.09□□□□□ -1.75
SF3B1-205ENST00000424674 C2CD5Q86YS7 1000 aa4.09□□□□□ -1.75
SF3B1-205ENST00000424674 LIX1LQ8IVB5 337 aa4.09□□□□□ -1.75
SF3B1-205ENST00000424674 SLC44A2Q8IWA5 706 aaPredicted RBP4.09□□□□□ -1.75
SF3B1-205ENST00000424674 REXO1L1PQ8IX06 675 aa4.09□□□□□ -1.75
SF3B1-205ENST00000424674 CMIPQ8IY22 773 aa4.09□□□□□ -1.75
SF3B1-205ENST00000424674 CISD2Q8N5K1 135 aaKnown RBP4.09□□□□□ -1.75
SF3B1-205ENST00000424674 STPG3Q8N7X2 389 aa4.09□□□□□ -1.75
SF3B1-205ENST00000424674 C2orf69Q8N8R5 385 aa4.09□□□□□ -1.75
SF3B1-205ENST00000424674 FANCBQ8NB91 859 aa4.09□□□□□ -1.75
SF3B1-205ENST00000424674 DNERQ8NFT8 737 aa4.09□□□□□ -1.75
SF3B1-205ENST00000424674 ZNF566Q969W8 418 aa4.09□□□□□ -1.75
SF3B1-205ENST00000424674 COA7Q96BR5 231 aa4.09□□□□□ -1.75
SF3B1-205ENST00000424674 CCDC43Q96MW1 224 aaKnown RBP4.09□□□□□ -1.75
SF3B1-205ENST00000424674 MOGAT1Q96PD6 335 aa4.09□□□□□ -1.75
SF3B1-205ENST00000424674 TSGA13Q96PP4 275 aa4.09□□□□□ -1.75
SF3B1-205ENST00000424674 CDK5RAP1Q96SZ6 601 aaKnown RBP4.09□□□□□ -1.75
SF3B1-205ENST00000424674 YME1L1Q96TA2 773 aa4.09□□□□□ -1.75
SF3B1-205ENST00000424674 C22orf23Q9BZE7 217 aa4.09□□□□□ -1.75
SF3B1-205ENST00000424674 MEGF9Q9H1U4 602 aa4.09□□□□□ -1.75
SF3B1-205ENST00000424674 RANBP17Q9H2T7 1088 aaKnown RBP4.09□□□□□ -1.75
SF3B1-205ENST00000424674 USP36Q9P275 1121 aaKnown RBP4.09□□□□□ -1.75
SF3B1-205ENST00000424674 KIF17Q9P2E2 1029 aa4.09□□□□□ -1.75
SF3B1-205ENST00000424674 RABL2AQ9UBK7 228 aaPredicted RBP4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms