RNA–Protein interactions for RNA: ENST00000424393.5

TOP3B-203, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 824 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-203ENST00000424393 SYAP1Q96A49 352 aaPredicted RBP11.72□□□□□ -0.53
TOP3B-203ENST00000424393 CEP63Q96MT8 703 aa11.72□□□□□ -0.53
TOP3B-203ENST00000424393 MED15Q96RN5 788 aa11.72□□□□□ -0.53
TOP3B-203ENST00000424393 PKMYT1Q99640 499 aa11.72□□□□□ -0.53
TOP3B-203ENST00000424393 ACBD6Q9BR61 282 aa11.72□□□□□ -0.53
TOP3B-203ENST00000424393 MRPL45Q9BRJ2 306 aaKnown RBP11.72□□□□□ -0.53
TOP3B-203ENST00000424393 KCNH6Q9H252 994 aa11.72□□□□□ -0.53
TOP3B-203ENST00000424393 MMRN2Q9H8L6 949 aa11.72□□□□□ -0.53
TOP3B-203ENST00000424393 VRTNQ9H8Y1 702 aa11.72□□□□□ -0.53
TOP3B-203ENST00000424393 PIDD1Q9HB75 910 aa11.72□□□□□ -0.53
TOP3B-203ENST00000424393 WDR6Q9NNW5 1121 aaKnown RBP11.72□□□□□ -0.53
TOP3B-203ENST00000424393 TMLHEQ9NVH6 421 aa11.72□□□□□ -0.53
TOP3B-203ENST00000424393 DDX43Q9NXZ2 648 aaKnown RBP11.72□□□□□ -0.53
TOP3B-203ENST00000424393 MAFFQ9ULX9 164 aa11.72□□□□□ -0.53
TOP3B-203ENST00000424393 POLIQ9UNA4 740 aa11.72□□□□□ -0.53
TOP3B-203ENST00000424393 YIPF1Q9Y548 306 aa11.72□□□□□ -0.53
TOP3B-203ENST00000424393 NME7Q9Y5B8 376 aa11.72□□□□□ -0.53
TOP3B-203ENST00000424393 BICDL2A1A5D9 508 aa11.71□□□□□ -0.53
TOP3B-203ENST00000424393 C2CD4DB7Z1M9 353 aa11.71□□□□□ -0.53
TOP3B-203ENST00000424393 PRRG1O14668 218 aa11.71□□□□□ -0.53
TOP3B-203ENST00000424393 N4BP1O75113 896 aaKnown RBP11.71□□□□□ -0.53
TOP3B-203ENST00000424393 XYLBO75191 536 aa11.71□□□□□ -0.53
TOP3B-203ENST00000424393 LRRN2O75325 713 aa11.71□□□□□ -0.53
TOP3B-203ENST00000424393 TACC1O75410 805 aa11.71□□□□□ -0.53
TOP3B-203ENST00000424393 WARSP23381 471 aaKnown RBP11.71□□□□□ -0.53
TOP3B-203ENST00000424393 LHX1P48742 406 aa11.71□□□□□ -0.53
TOP3B-203ENST00000424393 TNNC1P63316 161 aa11.71□□□□□ -0.53
TOP3B-203ENST00000424393 NTHL1P78549 312 aa11.71□□□□□ -0.53
TOP3B-203ENST00000424393 MYL7Q01449 175 aa11.71□□□□□ -0.53
TOP3B-203ENST00000424393 DUSP4Q13115 394 aa11.71□□□□□ -0.53
TOP3B-203ENST00000424393 CCDC142Q17RM4 750 aa11.71□□□□□ -0.53
TOP3B-203ENST00000424393 INTS6LQ5JSJ4 861 aaKnown RBP11.71□□□□□ -0.53
TOP3B-203ENST00000424393 GRASPQ7Z6J2 395 aaPredicted RBP11.71□□□□□ -0.53
TOP3B-203ENST00000424393 FILIP1Q7Z7B0 1213 aa11.71□□□□□ -0.53
TOP3B-203ENST00000424393 TAS1R2Q8TE23 839 aa11.71□□□□□ -0.53
TOP3B-203ENST00000424393 SLC35C1Q96A29 364 aa11.71□□□□□ -0.53
TOP3B-203ENST00000424393 MMS19Q96T76 1030 aa11.71□□□□□ -0.53
TOP3B-203ENST00000424393 SMYD3Q9H7B4 428 aa11.71□□□□□ -0.53
TOP3B-203ENST00000424393 TMEM8AQ9HCN3 771 aa11.71□□□□□ -0.53
TOP3B-203ENST00000424393 HCFC1R1Q9NWW0 138 aa11.71□□□□□ -0.53
TOP3B-203ENST00000424393 DNMT3BQ9UBC3 853 aaKnown RBP11.71□□□□□ -0.53
TOP3B-203ENST00000424393 NXF1Q9UBU9 619 aaKnown RBP11.71□□□□□ -0.53
TOP3B-203ENST00000424393 SLC27A5Q9Y2P5 690 aa11.71□□□□□ -0.53
TOP3B-203ENST00000424393 ASS1P00966 412 aaKnown RBP11.7□□□□□ -0.54
TOP3B-203ENST00000424393 LRG1P02750 347 aa11.7□□□□□ -0.54
TOP3B-203ENST00000424393 FAM163BP0C2L3 166 aa11.7□□□□□ -0.54
TOP3B-203ENST00000424393 LMO2P25791 158 aa11.7□□□□□ -0.54
TOP3B-203ENST00000424393 GTF2H1P32780 548 aa11.7□□□□□ -0.54
TOP3B-203ENST00000424393 PIK3CAP42336 1068 aa11.7□□□□□ -0.54
TOP3B-203ENST00000424393 RAP1GAPP47736 663 aa11.7□□□□□ -0.54
TOP3B-203ENST00000424393 MXI1P50539 228 aa11.7□□□□□ -0.54
TOP3B-203ENST00000424393 TWF1Q12792 350 aa11.7□□□□□ -0.54
TOP3B-203ENST00000424393 SGSM1Q2NKQ1 1148 aa11.7□□□□□ -0.54
TOP3B-203ENST00000424393 DPCR1Q3MIW9 517 aa11.7□□□□□ -0.54
TOP3B-203ENST00000424393 DCAF17Q5H9S7 520 aaPredicted RBP11.7□□□□□ -0.54
TOP3B-203ENST00000424393 ZNF667Q5HYK9 610 aa11.7□□□□□ -0.54
TOP3B-203ENST00000424393 TCERG1LQ5VWI1 586 aa11.7□□□□□ -0.54
TOP3B-203ENST00000424393 KRT39Q6A163 491 aa11.7□□□□□ -0.54
TOP3B-203ENST00000424393 SPOPLQ6IQ16 392 aa11.7□□□□□ -0.54
TOP3B-203ENST00000424393 SCARA5Q6ZMJ2 495 aa11.7□□□□□ -0.54
TOP3B-203ENST00000424393 RBM43Q6ZSC3 357 aaKnown RBP11.7□□□□□ -0.54
TOP3B-203ENST00000424393 FRMD5Q7Z6J6 570 aa11.7□□□□□ -0.54
TOP3B-203ENST00000424393 DCP1BQ8IZD4 617 aaKnown RBP11.7□□□□□ -0.54
TOP3B-203ENST00000424393 MLKLQ8NB16 471 aa11.7□□□□□ -0.54
TOP3B-203ENST00000424393 TAF4BQ92750 862 aa11.7□□□□□ -0.54
TOP3B-203ENST00000424393 SYT15Q9BQS2 421 aa11.7□□□□□ -0.54
TOP3B-203ENST00000424393 PI4K2AQ9BTU6 479 aa11.7□□□□□ -0.54
TOP3B-203ENST00000424393 SDCBP2Q9H190 292 aa11.7□□□□□ -0.54
TOP3B-203ENST00000424393 DNAJC25Q9H1X3 360 aa11.7□□□□□ -0.54
TOP3B-203ENST00000424393 APOBEC3GQ9HC16 384 aaKnown RBP11.7□□□□□ -0.54
TOP3B-203ENST00000424393 CEP72Q9P209 647 aa11.7□□□□□ -0.54
TOP3B-203ENST00000424393 ARMCX3Q9UH62 379 aaPredicted RBP11.7□□□□□ -0.54
TOP3B-203ENST00000424393 RWDD2AQ9UIY3 292 aa11.7□□□□□ -0.54
TOP3B-203ENST00000424393 GTF3C4Q9UKN8 822 aa11.7□□□□□ -0.54
TOP3B-203ENST00000424393 DOCK8Q8NF50 2099 aa11.69□□□□□ -0.54
TOP3B-203ENST00000424393 PTPRDP23468 1912 aa11.69□□□□□ -0.54
TOP3B-203ENST00000424393 MYBPHLA2RUH7 354 aa11.69□□□□□ -0.54
TOP3B-203ENST00000424393 STX10O60499 249 aa11.69□□□□□ -0.54
TOP3B-203ENST00000424393 ATP2C2O75185 946 aa11.69□□□□□ -0.54
TOP3B-203ENST00000424393 SOAT2O75908 522 aa11.69□□□□□ -0.54
TOP3B-203ENST00000424393 MBD3O95983 291 aa11.69□□□□□ -0.54
TOP3B-203ENST00000424393 PDGFRBP09619 1106 aa11.69□□□□□ -0.54
TOP3B-203ENST00000424393 PCSK1P29120 753 aa11.69□□□□□ -0.54
TOP3B-203ENST00000424393 ASPAP45381 313 aa11.69□□□□□ -0.54
TOP3B-203ENST00000424393 CDH8P55286 799 aa11.69□□□□□ -0.54
TOP3B-203ENST00000424393 NLRP12P59046 1061 aa11.69□□□□□ -0.54
TOP3B-203ENST00000424393 PSMC1P62191 440 aaKnown RBP11.69□□□□□ -0.54
TOP3B-203ENST00000424393 TSPY1Q01534 308 aa11.69□□□□□ -0.54
TOP3B-203ENST00000424393 SMARCB1Q12824 385 aa11.69□□□□□ -0.54
TOP3B-203ENST00000424393 CCDC40Q4G0X9 1142 aa11.69□□□□□ -0.54
TOP3B-203ENST00000424393 CBWD6Q4V339 395 aa11.69□□□□□ -0.54
TOP3B-203ENST00000424393 CBWD3Q5JTY5 395 aa11.69□□□□□ -0.54
TOP3B-203ENST00000424393 CBWD5Q5RIA9 395 aa11.69□□□□□ -0.54
TOP3B-203ENST00000424393 FAM171BQ6P995 826 aa11.69□□□□□ -0.54
TOP3B-203ENST00000424393 RNF135Q8IUD6 432 aa11.69□□□□□ -0.54
TOP3B-203ENST00000424393 TDRD5Q8NAT2 981 aaKnown RBP11.69□□□□□ -0.54
TOP3B-203ENST00000424393 OR6B3Q8NGW1 331 aa11.69□□□□□ -0.54
TOP3B-203ENST00000424393 SPPL2BQ8TCT7 592 aa11.69□□□□□ -0.54
TOP3B-203ENST00000424393 C2orf15Q8WU43 125 aaKnown RBP11.69□□□□□ -0.54
TOP3B-203ENST00000424393 SEMA4DQ92854 862 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms