RNA–Protein interactions for RNA: ENST00000422704.6

SEMA4D-208, Transcript of semaphorin 4D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEMA4D, Length 4,382 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-208ENST00000422704 HHIPL2Q6UWX4 724 aa11.11□□□□□ -0.63
SEMA4D-208ENST00000422704 SV2AQ7L0J3 742 aa11.11□□□□□ -0.63
SEMA4D-208ENST00000422704 EFHBQ8N7U6 833 aa11.11□□□□□ -0.63
SEMA4D-208ENST00000422704 FAM151AQ8WW52 585 aa11.11□□□□□ -0.63
SEMA4D-208ENST00000422704 TMEM8AQ9HCN3 771 aa11.11□□□□□ -0.63
SEMA4D-208ENST00000422704 MID2Q9UJV3 735 aa11.11□□□□□ -0.63
SEMA4D-208ENST00000422704 TBX20Q9UMR3 447 aa11.11□□□□□ -0.63
SEMA4D-208ENST00000422704 PITPNM2Q9BZ72 1349 aa11.11□□□□□ -0.63
SEMA4D-208ENST00000422704 JCADQ9P266 1359 aa11.1□□□□□ -0.63
SEMA4D-208ENST00000422704 E5RI56 91 aa11.1□□□□□ -0.63
SEMA4D-208ENST00000422704 TBX3O15119 743 aa11.1□□□□□ -0.63
SEMA4D-208ENST00000422704 ABCD1P33897 745 aa11.1□□□□□ -0.63
SEMA4D-208ENST00000422704 DEFB132Q7Z7B7 95 aa11.1□□□□□ -0.63
SEMA4D-208ENST00000422704 RCOR2Q8IZ40 523 aa11.1□□□□□ -0.63
SEMA4D-208ENST00000422704 PNMA3Q9UL41 463 aa11.1□□□□□ -0.63
SEMA4D-208ENST00000422704 ORC6Q9Y5N6 252 aa11.1□□□□□ -0.63
SEMA4D-208ENST00000422704 TCRBV5S4A2TA0A5A2 114 aa11.1□□□□□ -0.63
SEMA4D-208ENST00000422704 ANP32DO95626 131 aa11.1□□□□□ -0.63
SEMA4D-208ENST00000422704 HSPA8P11142 646 aaKnown RBP11.1□□□□□ -0.63
SEMA4D-208ENST00000422704 CYP11B1P15538 503 aa11.1□□□□□ -0.63
SEMA4D-208ENST00000422704 KCNA2P16389 499 aa11.1□□□□□ -0.63
SEMA4D-208ENST00000422704 NPTX2P47972 431 aa11.1□□□□□ -0.63
SEMA4D-208ENST00000422704 PPP4CP60510 307 aa11.1□□□□□ -0.63
SEMA4D-208ENST00000422704 AP2B1P63010 937 aa11.1□□□□□ -0.63
SEMA4D-208ENST00000422704 TSPY1Q01534 308 aa11.1□□□□□ -0.63
SEMA4D-208ENST00000422704 SGSM1Q2NKQ1 1148 aa11.1□□□□□ -0.63
SEMA4D-208ENST00000422704 IPMKQ8NFU5 416 aa11.1□□□□□ -0.63
SEMA4D-208ENST00000422704 FEZF2Q8TBJ5 459 aa11.1□□□□□ -0.63
SEMA4D-208ENST00000422704 GANCQ8TET4 914 aa11.1□□□□□ -0.63
SEMA4D-208ENST00000422704 KAT2BQ92831 832 aa11.1□□□□□ -0.63
SEMA4D-208ENST00000422704 INPP5DQ92835 1189 aa11.1□□□□□ -0.63
SEMA4D-208ENST00000422704 ZNF669Q96BR6 464 aaPredicted RBP11.1□□□□□ -0.63
SEMA4D-208ENST00000422704 MOV10L1Q9BXT6 1211 aaKnown RBP11.1□□□□□ -0.63
SEMA4D-208ENST00000422704 WWP1Q9H0M0 922 aa11.1□□□□□ -0.63
SEMA4D-208ENST00000422704 TASP1Q9H6P5 420 aa11.1□□□□□ -0.63
SEMA4D-208ENST00000422704 SP110Q9HB58 689 aa11.1□□□□□ -0.63
SEMA4D-208ENST00000422704 CACYBPQ9HB71 228 aaKnown RBP11.1□□□□□ -0.63
SEMA4D-208ENST00000422704 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.1□□□□□ -0.63
SEMA4D-208ENST00000422704 LCMT1Q9UIC8 334 aa11.1□□□□□ -0.63
SEMA4D-208ENST00000422704 SPTLC1O15269 473 aa11.1□□□□□ -0.63
SEMA4D-208ENST00000422704 PMPCBO75439 489 aa11.1□□□□□ -0.63
SEMA4D-208ENST00000422704 SKAP2O75563 359 aaPredicted RBP11.1□□□□□ -0.63
SEMA4D-208ENST00000422704 ATP5HO75947 161 aa11.1□□□□□ -0.63
SEMA4D-208ENST00000422704 ATP6V1B1P15313 513 aa11.1□□□□□ -0.63
SEMA4D-208ENST00000422704 SLC1A1P43005 524 aa11.1□□□□□ -0.63
SEMA4D-208ENST00000422704 EFNA5P52803 228 aa11.1□□□□□ -0.63
SEMA4D-208ENST00000422704 CSE1LP55060 971 aaKnown RBP11.1□□□□□ -0.63
SEMA4D-208ENST00000422704 HIC1Q14526 733 aa11.1□□□□□ -0.63
SEMA4D-208ENST00000422704 TMEM132DQ14C87 1099 aa11.1□□□□□ -0.63
SEMA4D-208ENST00000422704 EFTUD2Q15029 972 aaKnown RBP eCLIP11.1□□□□□ -0.63
SEMA4D-208ENST00000422704 ZSWIM1Q9BR11 485 aa11.1□□□□□ -0.63
SEMA4D-208ENST00000422704 IKZF4Q9H2S9 585 aa11.1□□□□□ -0.63
SEMA4D-208ENST00000422704 INTS13Q9NVM9 706 aa11.1□□□□□ -0.63
SEMA4D-208ENST00000422704 ZNF446Q9NWS9 450 aa11.1□□□□□ -0.63
SEMA4D-208ENST00000422704 UBP1Q9NZI7 540 aa11.1□□□□□ -0.63
SEMA4D-208ENST00000422704 LZTS1Q9Y250 596 aa11.1□□□□□ -0.63
SEMA4D-208ENST00000422704 SPEF2Q9C093 1822 aa11.1□□□□□ -0.63
SEMA4D-208ENST00000422704 A0A1W2PQJ5 194 aa11.09□□□□□ -0.63
SEMA4D-208ENST00000422704 FAM86B1E9PN63 330 aa11.09□□□□□ -0.63
SEMA4D-208ENST00000422704 ADCY3O60266 1144 aa11.09□□□□□ -0.63
SEMA4D-208ENST00000422704 FAM86B2P0C5J1 330 aa11.09□□□□□ -0.63
SEMA4D-208ENST00000422704 HOXA7P31268 230 aaPredicted RBP11.09□□□□□ -0.63
SEMA4D-208ENST00000422704 ETFBP38117 255 aa11.09□□□□□ -0.63
SEMA4D-208ENST00000422704 CTCFP49711 727 aaPredicted RBP11.09□□□□□ -0.63
SEMA4D-208ENST00000422704 SULT1E1P49888 294 aa11.09□□□□□ -0.63
SEMA4D-208ENST00000422704 GMPSP49915 693 aaPredicted RBP11.09□□□□□ -0.63
SEMA4D-208ENST00000422704 CORO7P57737 925 aa11.09□□□□□ -0.63
SEMA4D-208ENST00000422704 KCNMA1Q12791 1236 aa11.09□□□□□ -0.63
SEMA4D-208ENST00000422704 R3HDM1Q15032 1099 aaKnown RBP11.09□□□□□ -0.63
SEMA4D-208ENST00000422704 ATF7IP2Q5U623 682 aa11.09□□□□□ -0.63
SEMA4D-208ENST00000422704 PAPD7Q5XG87 772 aaKnown RBP11.09□□□□□ -0.63
SEMA4D-208ENST00000422704 SLC7A14Q8TBB6 771 aa11.09□□□□□ -0.63
SEMA4D-208ENST00000422704 CDC42EP4Q9H3Q1 356 aaKnown RBP11.09□□□□□ -0.63
SEMA4D-208ENST00000422704 DDX4Q9NQI0 724 aaKnown RBP11.09□□□□□ -0.63
SEMA4D-208ENST00000422704 DDX56Q9NY93 547 aaKnown RBP11.09□□□□□ -0.63
SEMA4D-208ENST00000422704 PSMC3IPQ9P2W1 217 aaPredicted RBP11.09□□□□□ -0.63
SEMA4D-208ENST00000422704 PRG3Q9Y2Y8 225 aaPredicted RBP11.09□□□□□ -0.63
SEMA4D-208ENST00000422704 PAMP19021 973 aa11.09□□□□□ -0.63
SEMA4D-208ENST00000422704 GLRBP48167 497 aa11.09□□□□□ -0.63
SEMA4D-208ENST00000422704 IFI35P80217 286 aaPredicted RBP11.09□□□□□ -0.63
SEMA4D-208ENST00000422704 LRRC23Q53EV4 343 aaPredicted RBP11.09□□□□□ -0.63
SEMA4D-208ENST00000422704 C11orf63Q6NUN7 778 aa11.09□□□□□ -0.63
SEMA4D-208ENST00000422704 ACOT1Q86TX2 421 aa11.09□□□□□ -0.63
SEMA4D-208ENST00000422704 SCG3Q8WXD2 468 aaKnown RBP11.09□□□□□ -0.63
SEMA4D-208ENST00000422704 L3MBTL3Q96JM7 780 aaPredicted RBP11.09□□□□□ -0.63
SEMA4D-208ENST00000422704 PNMA5Q96PV4 448 aa11.09□□□□□ -0.63
SEMA4D-208ENST00000422704 RTFDC1Q9BY42 306 aaPredicted RBP11.09□□□□□ -0.63
SEMA4D-208ENST00000422704 GTF3C4Q9UKN8 822 aa11.09□□□□□ -0.63
SEMA4D-208ENST00000422704 SLC39A10Q9ULF5 831 aa11.09□□□□□ -0.63
SEMA4D-208ENST00000422704 BMPR2Q13873 1038 aa11.09□□□□□ -0.63
SEMA4D-208ENST00000422704 CHI3L2Q15782 390 aa11.09□□□□□ -0.63
SEMA4D-208ENST00000422704 IMPG1Q17R60 797 aa11.09□□□□□ -0.63
SEMA4D-208ENST00000422704 EML3Q32P44 896 aa11.09□□□□□ -0.63
SEMA4D-208ENST00000422704 WDR93Q6P2C0 686 aa11.09□□□□□ -0.63
SEMA4D-208ENST00000422704 CDKL3Q8IVW4 592 aaPredicted RBP11.09□□□□□ -0.63
SEMA4D-208ENST00000422704 RNF168Q8IYW5 571 aaPredicted RBP11.09□□□□□ -0.63
SEMA4D-208ENST00000422704 THEM5Q8N1Q8 247 aa11.09□□□□□ -0.63
SEMA4D-208ENST00000422704 PRPF31Q8WWY3 499 aaKnown RBP11.09□□□□□ -0.63
SEMA4D-208ENST00000422704 ASIC4Q96FT7 647 aa11.09□□□□□ -0.63
SEMA4D-208ENST00000422704 RIT2Q99578 217 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms