RNA–Protein interactions for RNA: ENST00000421756.5

MCF2L-213, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best) BASIC

Gene MCF2L, Length 3,560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-213ENST00000421756 TIPINQ9BVW5 301 aa14.08□□□□□ -0.15
MCF2L-213ENST00000421756 LRRC19Q9H756 370 aa14.08□□□□□ -0.15
MCF2L-213ENST00000421756 GINM1Q9NU53 330 aa14.08□□□□□ -0.15
MCF2L-213ENST00000421756 AGAP1Q9UPQ3 857 aa14.08□□□□□ -0.15
MCF2L-213ENST00000421756 MAFBQ9Y5Q3 323 aaPredicted RBP14.08□□□□□ -0.15
MCF2L-213ENST00000421756 QSER1Q2KHR3 1735 aa14.08□□□□□ -0.16
MCF2L-213ENST00000421756 TP73O15350 636 aa14.08□□□□□ -0.16
MCF2L-213ENST00000421756 TOM1L1O75674 476 aa14.08□□□□□ -0.16
MCF2L-213ENST00000421756 SCTRP47872 440 aa14.08□□□□□ -0.16
MCF2L-213ENST00000421756 FNTAP49354 379 aa14.08□□□□□ -0.16
MCF2L-213ENST00000421756 IRX4P78413 519 aa14.08□□□□□ -0.16
MCF2L-213ENST00000421756 OVGP1Q12889 678 aa14.08□□□□□ -0.16
MCF2L-213ENST00000421756 CNGA2Q16280 664 aa14.08□□□□□ -0.16
MCF2L-213ENST00000421756 PKN2Q16513 984 aaKnown RBP14.08□□□□□ -0.16
MCF2L-213ENST00000421756 RSAD2Q8WXG1 361 aa14.08□□□□□ -0.16
MCF2L-213ENST00000421756 CPXM1Q96SM3 734 aa14.08□□□□□ -0.16
MCF2L-213ENST00000421756 TRIM56Q9BRZ2 755 aaKnown RBP14.08□□□□□ -0.16
MCF2L-213ENST00000421756 TRAIPQ9BWF2 469 aa14.08□□□□□ -0.16
MCF2L-213ENST00000421756 TXLNGYQ9BZA5 131 aa14.08□□□□□ -0.16
MCF2L-213ENST00000421756 HOMER3Q9NSC5 361 aa14.08□□□□□ -0.16
MCF2L-213ENST00000421756 CNTNAP2Q9UHC6 1331 aa14.08□□□□□ -0.16
MCF2L-213ENST00000421756 A0A1W2PPM1 405 aa14.08□□□□□ -0.16
MCF2L-213ENST00000421756 PDGFRBP09619 1106 aa14.08□□□□□ -0.16
MCF2L-213ENST00000421756 CA4P22748 312 aa14.08□□□□□ -0.16
MCF2L-213ENST00000421756 IL1R2P27930 398 aa14.08□□□□□ -0.16
MCF2L-213ENST00000421756 POLR2BP30876 1174 aaKnown RBP14.08□□□□□ -0.16
MCF2L-213ENST00000421756 OTUD4Q01804 1114 aaKnown RBP14.08□□□□□ -0.16
MCF2L-213ENST00000421756 ZNF252P-AS1Q0IIN9 211 aa14.08□□□□□ -0.16
MCF2L-213ENST00000421756 ZNF667Q5HYK9 610 aa14.08□□□□□ -0.16
MCF2L-213ENST00000421756 ZNF449Q6P9G9 518 aa14.08□□□□□ -0.16
MCF2L-213ENST00000421756 APOBEC3FQ8IUX4 373 aaKnown RBP14.08□□□□□ -0.16
MCF2L-213ENST00000421756 RPF1Q9H9Y2 349 aaKnown RBP14.08□□□□□ -0.16
MCF2L-213ENST00000421756 C17orf75Q9HAS0 396 aa14.08□□□□□ -0.16
MCF2L-213ENST00000421756 CYTH4Q9UIA0 394 aa14.08□□□□□ -0.16
MCF2L-213ENST00000421756 DCTN4Q9UJW0 460 aa14.08□□□□□ -0.16
MCF2L-213ENST00000421756 ITIH2P19823 946 aa14.07□□□□□ -0.16
MCF2L-213ENST00000421756 ARL2P36404 184 aa14.07□□□□□ -0.16
MCF2L-213ENST00000421756 RABGGTBP53611 331 aa14.07□□□□□ -0.16
MCF2L-213ENST00000421756 KIZQ2M2Z5 673 aa14.07□□□□□ -0.16
MCF2L-213ENST00000421756 ANKRD22Q5VYY1 191 aa14.07□□□□□ -0.16
MCF2L-213ENST00000421756 CTAGE3PQ8IX95 158 aa14.07□□□□□ -0.16
MCF2L-213ENST00000421756 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.07□□□□□ -0.161e-6■■■■■ 56.2
MCF2L-213ENST00000421756 KLK14Q9P0G3 267 aa14.07□□□□□ -0.16
MCF2L-213ENST00000421756 KIAA1217Q5T5P2 1943 aa14.07□□□□□ -0.16
MCF2L-213ENST00000421756 POLR2AP24928 1970 aaKnown RBP14.07□□□□□ -0.16
MCF2L-213ENST00000421756 GPR25O00155 361 aa14.07□□□□□ -0.16
MCF2L-213ENST00000421756 UBOX5O94941 541 aa14.07□□□□□ -0.16
MCF2L-213ENST00000421756 ITGBL1O95965 494 aaPredicted RBP14.07□□□□□ -0.16
MCF2L-213ENST00000421756 CYP1A1P04798 512 aaPredicted RBP14.07□□□□□ -0.16
MCF2L-213ENST00000421756 WDTC1Q8N5D0 677 aa14.07□□□□□ -0.16
MCF2L-213ENST00000421756 ANKRD36BP1Q96IX9 119 aa14.07□□□□□ -0.16
MCF2L-213ENST00000421756 NIF3L1Q9GZT8 377 aa14.07□□□□□ -0.16
MCF2L-213ENST00000421756 CHMP2BQ9UQN3 213 aa14.07□□□□□ -0.16
MCF2L-213ENST00000421756 TCRBV7S3A2A0A539 114 aa14.07□□□□□ -0.16
MCF2L-213ENST00000421756 E2F8A0AVK6 867 aa14.07□□□□□ -0.16
MCF2L-213ENST00000421756 MSCO60682 206 aa14.07□□□□□ -0.16
MCF2L-213ENST00000421756 AGTP01019 485 aa14.07□□□□□ -0.16
MCF2L-213ENST00000421756 RPS12P25398 132 aaKnown RBP14.07□□□□□ -0.16
MCF2L-213ENST00000421756 MMP13P45452 471 aa14.07□□□□□ -0.16
MCF2L-213ENST00000421756 NEDD9Q14511 834 aa14.07□□□□□ -0.16
MCF2L-213ENST00000421756 JADE1Q6IE81 842 aa14.07□□□□□ -0.16
MCF2L-213ENST00000421756 KIAA0319LQ8IZA0 1049 aa14.07□□□□□ -0.16
MCF2L-213ENST00000421756 GRK7Q8WTQ7 553 aa14.07□□□□□ -0.16
MCF2L-213ENST00000421756 ATXN2LQ8WWM7 1075 aaKnown RBP14.07□□□□□ -0.16
MCF2L-213ENST00000421756 PRCCQ92733 491 aaPredicted RBP14.07□□□□□ -0.16
MCF2L-213ENST00000421756 RUNDC3BQ96NL0 473 aa14.07□□□□□ -0.16
MCF2L-213ENST00000421756 KIAA1586Q9HCI6 787 aa14.07□□□□□ -0.16
MCF2L-213ENST00000421756 LACTBL1A8MY62 500 aa14.06□□□□□ -0.16
MCF2L-213ENST00000421756 H7C0C1 242 aa14.06□□□□□ -0.16
MCF2L-213ENST00000421756 LDHAP00338 332 aaKnown RBP14.06□□□□□ -0.16
MCF2L-213ENST00000421756 NUDT17P0C025 328 aa14.06□□□□□ -0.16
MCF2L-213ENST00000421756 INSRRP14616 1297 aa14.06□□□□□ -0.16
MCF2L-213ENST00000421756 IVDP26440 423 aa14.06□□□□□ -0.16
MCF2L-213ENST00000421756 ATP5OP48047 213 aa14.06□□□□□ -0.16
MCF2L-213ENST00000421756 ANKRD20A8PQ5CZ79 823 aa14.06□□□□□ -0.16
MCF2L-213ENST00000421756 LBX2Q6XYB7 198 aa14.06□□□□□ -0.16
MCF2L-213ENST00000421756 SPOCD1Q6ZMY3 1216 aa14.06□□□□□ -0.16
MCF2L-213ENST00000421756 ENOSF1Q7L5Y1 443 aa14.06□□□□□ -0.16
MCF2L-213ENST00000421756 LENG1Q96BZ8 264 aaPredicted RBP14.06□□□□□ -0.16
MCF2L-213ENST00000421756 CNOT10Q9H9A5 744 aaKnown RBP14.06□□□□□ -0.16
MCF2L-213ENST00000421756 KLC4Q9NSK0 619 aa14.06□□□□□ -0.16
MCF2L-213ENST00000421756 IP6K2Q9UHH9 426 aa14.06□□□□□ -0.16
MCF2L-213ENST00000421756 OGTO15294 1046 aa14.06□□□□□ -0.16
MCF2L-213ENST00000421756 TFDP1Q14186 410 aa14.06□□□□□ -0.16
MCF2L-213ENST00000421756 C15orf39Q6ZRI6 1047 aa14.06□□□□□ -0.16
MCF2L-213ENST00000421756 VTI1AQ96AJ9 217 aa14.06□□□□□ -0.16
MCF2L-213ENST00000421756 SLITRK1Q96PX8 696 aa14.06□□□□□ -0.16
MCF2L-213ENST00000421756 MMP19Q99542 508 aa14.06□□□□□ -0.16
MCF2L-213ENST00000421756 ACO2Q99798 780 aaKnown RBP14.06□□□□□ -0.16
MCF2L-213ENST00000421756 CCDC77Q9BR77 488 aa14.06□□□□□ -0.16
MCF2L-213ENST00000421756 B3GNT5Q9BYG0 378 aa14.06□□□□□ -0.16
MCF2L-213ENST00000421756 CEP41Q9BYV8 373 aa14.06□□□□□ -0.16
MCF2L-213ENST00000421756 CACNG4Q9UBN1 327 aa14.06□□□□□ -0.16
MCF2L-213ENST00000421756 MYO18AQ92614 2054 aaKnown RBP14.06□□□□□ -0.16
MCF2L-213ENST00000421756 A6NNZ2 444 aa14.06□□□□□ -0.16
MCF2L-213ENST00000421756 A8MUI8 341 aa14.06□□□□□ -0.16
MCF2L-213ENST00000421756 TJP3O95049 919 aa14.06□□□□□ -0.16
MCF2L-213ENST00000421756 ASS1P00966 412 aaKnown RBP14.06□□□□□ -0.16
MCF2L-213ENST00000421756 F7P08709 466 aaPredicted RBP14.06□□□□□ -0.16
MCF2L-213ENST00000421756 MMP8P22894 467 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms