RNA–Protein interactions for RNA: ENST00000421670.3

DDX55-203, Transcript of DEAD-box helicase 55, humanhuman

TSL 1 (best) BASIC

Gene DDX55, Length 1,574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-203ENST00000421670 USP8P40818 1118 aa16.77■□□□□ 0.27
DDX55-203ENST00000421670 LHX1P48742 406 aa16.77■□□□□ 0.27
DDX55-203ENST00000421670 CDR1P51861 262 aa16.77■□□□□ 0.27
DDX55-203ENST00000421670 PSMC1P62191 440 aaKnown RBP16.77■□□□□ 0.27
DDX55-203ENST00000421670 YWHAEP62258 255 aaKnown RBP16.77■□□□□ 0.27
DDX55-203ENST00000421670 MRPL58Q14197 206 aaKnown RBP16.77■□□□□ 0.27
DDX55-203ENST00000421670 CTXN3Q4LDR2 81 aa16.77■□□□□ 0.27
DDX55-203ENST00000421670 FIGNQ5HY92 759 aa16.77■□□□□ 0.27
DDX55-203ENST00000421670 RSPO2Q6UXX9 243 aaPredicted RBP16.77■□□□□ 0.27
DDX55-203ENST00000421670 ANKS3Q6ZW76 656 aa16.77■□□□□ 0.27
DDX55-203ENST00000421670 GLYCTKQ8IVS8 523 aa16.77■□□□□ 0.27
DDX55-203ENST00000421670 BAP1Q92560 729 aa16.77■□□□□ 0.27
DDX55-203ENST00000421670 SPAG5Q96R06 1193 aa16.77■□□□□ 0.27
DDX55-203ENST00000421670 STK33Q9BYT3 514 aa16.77■□□□□ 0.27
DDX55-203ENST00000421670 ELOVL4Q9GZR5 314 aa16.77■□□□□ 0.27
DDX55-203ENST00000421670 MRPL17Q9NRX2 175 aaKnown RBP16.77■□□□□ 0.27
DDX55-203ENST00000421670 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.76■□□□□ 0.27
DDX55-203ENST00000421670 FOXN3O00409 490 aaPredicted RBP16.76■□□□□ 0.27
DDX55-203ENST00000421670 ATP2C2O75185 946 aa16.76■□□□□ 0.27
DDX55-203ENST00000421670 CALCAP01258 141 aa16.76■□□□□ 0.27
DDX55-203ENST00000421670 OR4Q2P0C623 313 aa16.76■□□□□ 0.27
DDX55-203ENST00000421670 CASP14P31944 242 aa16.76■□□□□ 0.27
DDX55-203ENST00000421670 FXR1P51114 621 aaKnown RBP eCLIP16.76■□□□□ 0.27
DDX55-203ENST00000421670 THEM5Q8N1Q8 247 aa16.76■□□□□ 0.27
DDX55-203ENST00000421670 RBBP8NLQ8NC74 664 aaPredicted RBP16.76■□□□□ 0.27
DDX55-203ENST00000421670 SPATA18Q8TC71 538 aa16.76■□□□□ 0.27
DDX55-203ENST00000421670 JAKMIP2Q96AA8 810 aa16.76■□□□□ 0.27
DDX55-203ENST00000421670 LPIN3Q9BQK8 851 aa16.76■□□□□ 0.27
DDX55-203ENST00000421670 NUP58Q9BVL2 599 aa16.76■□□□□ 0.27
DDX55-203ENST00000421670 MTRRQ9UBK8 725 aa16.76■□□□□ 0.27
DDX55-203ENST00000421670 DAAM1Q9Y4D1 1078 aa16.76■□□□□ 0.27
DDX55-203ENST00000421670 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.76■□□□□ 0.277e-7■■□□□ 14.4
DDX55-203ENST00000421670 CDY1Q9Y6F8 540 aa16.76■□□□□ 0.27
DDX55-203ENST00000421670 LRRC53A6NM62 1247 aa16.75■□□□□ 0.27
DDX55-203ENST00000421670 HIDE1A8MVS5 230 aa16.75■□□□□ 0.27
DDX55-203ENST00000421670 ADAM12O43184 909 aa16.75■□□□□ 0.27
DDX55-203ENST00000421670 LPXNO60711 386 aa16.75■□□□□ 0.27
DDX55-203ENST00000421670 CDC25BP30305 580 aa16.75■□□□□ 0.27
DDX55-203ENST00000421670 RAD23BP54727 409 aa16.75■□□□□ 0.27
DDX55-203ENST00000421670 GOLGA8FQ08AF8 430 aa16.75■□□□□ 0.27
DDX55-203ENST00000421670 GOLGA8DPQ0D2H9 430 aa16.75■□□□□ 0.27
DDX55-203ENST00000421670 ACOT1Q86TX2 421 aa16.75■□□□□ 0.27
DDX55-203ENST00000421670 DRC7Q8IY82 874 aa16.75■□□□□ 0.27
DDX55-203ENST00000421670 SLC4A11Q8NBS3 891 aa16.75■□□□□ 0.27
DDX55-203ENST00000421670 SPC24Q8NBT2 197 aa16.75■□□□□ 0.27
DDX55-203ENST00000421670 SYT15Q9BQS2 421 aa16.75■□□□□ 0.27
DDX55-203ENST00000421670 NT5C1AQ9BXI3 368 aa16.75■□□□□ 0.27
DDX55-203ENST00000421670 ACP6Q9NPH0 428 aa16.75■□□□□ 0.27
DDX55-203ENST00000421670 MTCL1Q9Y4B5 1905 aaKnown RBP16.74■□□□□ 0.27
DDX55-203ENST00000421670 SPTBN5Q9NRC6 3674 aaKnown RBP16.74■□□□□ 0.27
DDX55-203ENST00000421670 A0A1W2PQJ5 194 aa16.74■□□□□ 0.27
DDX55-203ENST00000421670 H7C4K7 107 aa16.74■□□□□ 0.27
DDX55-203ENST00000421670 FSCN2O14926 492 aa16.74■□□□□ 0.27
DDX55-203ENST00000421670 TBC1D4O60343 1298 aa16.74■□□□□ 0.27
DDX55-203ENST00000421670 LILRB3O75022 631 aa16.74■□□□□ 0.27
DDX55-203ENST00000421670 GFPT2O94808 682 aa16.74■□□□□ 0.27
DDX55-203ENST00000421670 CXCL14O95715 111 aa16.74■□□□□ 0.27
DDX55-203ENST00000421670 FAM163BP0C2L3 166 aa16.74■□□□□ 0.27
DDX55-203ENST00000421670 PCSK1P29120 753 aa16.74■□□□□ 0.27
DDX55-203ENST00000421670 ZNF132P52740 706 aa16.74■□□□□ 0.27
DDX55-203ENST00000421670 ARPP19P56211 112 aa16.74■□□□□ 0.27
DDX55-203ENST00000421670 TBX2Q13207 712 aaPredicted RBP16.74■□□□□ 0.27
DDX55-203ENST00000421670 TRIM14Q14142 442 aa16.74■□□□□ 0.27
DDX55-203ENST00000421670 SMC1AQ14683 1233 aaKnown RBP16.74■□□□□ 0.27
DDX55-203ENST00000421670 PDXDC1Q6P996 788 aa16.74■□□□□ 0.27
DDX55-203ENST00000421670 PPFIBP1Q86W92 1011 aa16.74■□□□□ 0.27
DDX55-203ENST00000421670 UNC93AQ86WB7 457 aa16.74■□□□□ 0.27
DDX55-203ENST00000421670 TTC39CQ8N584 583 aa16.74■□□□□ 0.27
DDX55-203ENST00000421670 C12orf29Q8N999 325 aa16.74■□□□□ 0.27
DDX55-203ENST00000421670 B3GALNT2Q8NCR0 500 aa16.74■□□□□ 0.27
DDX55-203ENST00000421670 MICAL1Q8TDZ2 1067 aa16.74■□□□□ 0.27
DDX55-203ENST00000421670 FAM161BQ96MY7 647 aa16.74■□□□□ 0.27
DDX55-203ENST00000421670 CLSTN3Q9BQT9 956 aa16.74■□□□□ 0.27
DDX55-203ENST00000421670 ACBD6Q9BR61 282 aa16.74■□□□□ 0.27
DDX55-203ENST00000421670 PRDM12Q9H4Q4 367 aa16.74■□□□□ 0.27
DDX55-203ENST00000421670 FAM124BQ9H5Z6 455 aaPredicted RBP16.74■□□□□ 0.27
DDX55-203ENST00000421670 CAPN11Q9UMQ6 739 aa16.74■□□□□ 0.27
DDX55-203ENST00000421670 CNTN6Q9UQ52 1028 aa16.74■□□□□ 0.27
DDX55-203ENST00000421670 TMEM265A0A087WTH1 108 aa16.73■□□□□ 0.27
DDX55-203ENST00000421670 CYP26A1O43174 497 aa16.73■□□□□ 0.27
DDX55-203ENST00000421670 CPB1P15086 417 aa16.73■□□□□ 0.27
DDX55-203ENST00000421670 OR1D2P34982 312 aa16.73■□□□□ 0.27
DDX55-203ENST00000421670 SOX5P35711 763 aa16.73■□□□□ 0.27
DDX55-203ENST00000421670 ARID5AQ03989 594 aa16.73■□□□□ 0.27
DDX55-203ENST00000421670 INTS6LQ5JSJ4 861 aaKnown RBP16.73■□□□□ 0.27
DDX55-203ENST00000421670 E4F1Q66K89 784 aaPredicted RBP16.73■□□□□ 0.27
DDX55-203ENST00000421670 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.73■□□□□ 0.27
DDX55-203ENST00000421670 FAM71AQ8IYT1 594 aa16.73■□□□□ 0.27
DDX55-203ENST00000421670 IQCDQ96DY2 449 aa16.73■□□□□ 0.27
DDX55-203ENST00000421670 TMEM176AQ96HP8 235 aa16.73■□□□□ 0.27
DDX55-203ENST00000421670 CRTAC1Q9NQ79 661 aa16.73■□□□□ 0.27
DDX55-203ENST00000421670 FAM49BQ9NUQ9 324 aa16.73■□□□□ 0.27
DDX55-203ENST00000421670 CDH9Q9ULB4 789 aa16.73■□□□□ 0.27
DDX55-203ENST00000421670 BACE2Q9Y5Z0 518 aa16.73■□□□□ 0.27
DDX55-203ENST00000421670 PRRC2BQ5JSZ5 2229 aaKnown RBP16.73■□□□□ 0.27
DDX55-203ENST00000421670 PATJQ8NI35 1801 aa16.73■□□□□ 0.27
DDX55-203ENST00000421670 MYBPHLA2RUH7 354 aa16.72■□□□□ 0.27
DDX55-203ENST00000421670 C2orf71A6NGG8 1288 aa16.72■□□□□ 0.27
DDX55-203ENST00000421670 OR6C75A6NL08 312 aa16.72■□□□□ 0.27
DDX55-203ENST00000421670 TEX28O15482 410 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms