RNA–Protein interactions for RNA: ENST00000421263.1

VARS2-202, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 460 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-202ENST00000421263 CACTINQ8WUQ7 758 aaKnown RBP20.38■□□□□ 0.85
VARS2-202ENST00000421263 SAAL1Q96ER3 474 aa20.38■□□□□ 0.85
VARS2-202ENST00000421263 MSANTD3Q96H12 275 aa20.38■□□□□ 0.85
VARS2-202ENST00000421263 SEPT5Q99719 369 aaPredicted RBP20.38■□□□□ 0.85
VARS2-202ENST00000421263 FAM126AQ9BYI3 521 aaPredicted RBP20.38■□□□□ 0.85
VARS2-202ENST00000421263 TMEM206Q9H813 350 aa20.38■□□□□ 0.85
VARS2-202ENST00000421263 K7ELQ4 463 aaPredicted RBP20.37■□□□□ 0.85
VARS2-202ENST00000421263 EXTL3O43909 919 aa20.37■□□□□ 0.85
VARS2-202ENST00000421263 ITGB3P05106 788 aa20.37■□□□□ 0.85
VARS2-202ENST00000421263 TDGF1P13385 188 aa20.37■□□□□ 0.85
VARS2-202ENST00000421263 CCNE1P24864 410 aa20.37■□□□□ 0.85
VARS2-202ENST00000421263 TFAMQ00059 246 aaKnown RBP20.37■□□□□ 0.85
VARS2-202ENST00000421263 VEPH1Q14D04 833 aa20.37■□□□□ 0.85
VARS2-202ENST00000421263 ARHGAP15Q53QZ3 475 aa20.37■□□□□ 0.85
VARS2-202ENST00000421263 C1orf228Q6PIY5 440 aa20.37■□□□□ 0.85
VARS2-202ENST00000421263 TSSK4Q6SA08 328 aa20.37■□□□□ 0.85
VARS2-202ENST00000421263 GPIHBP1Q8IV16 184 aa20.37■□□□□ 0.85
VARS2-202ENST00000421263 YAF2Q8IY57 180 aa20.37■□□□□ 0.85
VARS2-202ENST00000421263 SYCP3Q8IZU3 236 aa20.37■□□□□ 0.85
VARS2-202ENST00000421263 CBWD1Q9BRT8 395 aa20.37■□□□□ 0.85
VARS2-202ENST00000421263 C8orf33Q9H7E9 229 aaPredicted RBP20.37■□□□□ 0.85
VARS2-202ENST00000421263 TMLHEQ9NVH6 421 aa20.37■□□□□ 0.85
VARS2-202ENST00000421263 KBTBD4Q9NVX7 518 aa20.37■□□□□ 0.85
VARS2-202ENST00000421263 RBAKQ9NYW8 714 aaPredicted RBP20.37■□□□□ 0.85
VARS2-202ENST00000421263 AGAP1Q9UPQ3 857 aa20.37■□□□□ 0.85
VARS2-202ENST00000421263 NUP210Q8TEM1 1887 aaPredicted RBP20.37■□□□□ 0.85
VARS2-202ENST00000421263 DMXL1Q9Y485 3027 aa20.36■□□□□ 0.85
VARS2-202ENST00000421263 PPP6R2O75170 966 aa20.36■□□□□ 0.85
VARS2-202ENST00000421263 PRPF6O94906 941 aaKnown RBP20.36■□□□□ 0.85
VARS2-202ENST00000421263 HMGA1P17096 107 aaKnown RBP20.36■□□□□ 0.85
VARS2-202ENST00000421263 CDC25CP30307 473 aa20.36■□□□□ 0.85
VARS2-202ENST00000421263 POLR2BP30876 1174 aaKnown RBP20.36■□□□□ 0.85
VARS2-202ENST00000421263 CDR1P51861 262 aa20.36■□□□□ 0.85
VARS2-202ENST00000421263 E2F4Q16254 413 aa20.36■□□□□ 0.85
VARS2-202ENST00000421263 ARHGAP29Q52LW3 1261 aa20.36■□□□□ 0.85
VARS2-202ENST00000421263 TMEM150AQ86TG1 271 aa20.36■□□□□ 0.85
VARS2-202ENST00000421263 PDCL2Q8N4E4 241 aa20.36■□□□□ 0.85
VARS2-202ENST00000421263 DCLK2Q8N568 766 aa20.36■□□□□ 0.85
VARS2-202ENST00000421263 LRRC52Q8N7C0 313 aa20.36■□□□□ 0.85
VARS2-202ENST00000421263 PDILTQ8N807 584 aa20.36■□□□□ 0.85
VARS2-202ENST00000421263 FAM200AQ8TCP9 573 aa20.36■□□□□ 0.85
VARS2-202ENST00000421263 CSGALNACT1Q8TDX6 532 aa20.36■□□□□ 0.85
VARS2-202ENST00000421263 ATRIPQ8WXE1 791 aa20.36■□□□□ 0.85
VARS2-202ENST00000421263 ACBD6Q9BR61 282 aa20.36■□□□□ 0.85
VARS2-202ENST00000421263 SLC46A2Q9BY10 475 aa20.36■□□□□ 0.85
VARS2-202ENST00000421263 FOXD4L1Q9NU39 408 aa20.36■□□□□ 0.85
VARS2-202ENST00000421263 GDAP2Q9NXN4 497 aa20.36■□□□□ 0.85
VARS2-202ENST00000421263 L1RE1Q9UN81 338 aa20.36■□□□□ 0.85
VARS2-202ENST00000421263 PCDHB5Q9Y5E4 795 aa20.36■□□□□ 0.85
VARS2-202ENST00000421263 MYBPHLA2RUH7 354 aa20.35■□□□□ 0.85
VARS2-202ENST00000421263 GOLGA8IPA6NC78 632 aa20.35■□□□□ 0.85
VARS2-202ENST00000421263 GOLGA8JA6NMD2 632 aa20.35■□□□□ 0.85
VARS2-202ENST00000421263 KIAA0391O15091 583 aaKnown RBP20.35■□□□□ 0.85
VARS2-202ENST00000421263 F11P03951 625 aa20.35■□□□□ 0.85
VARS2-202ENST00000421263 GAS6Q14393 721 aa20.35■□□□□ 0.85
VARS2-202ENST00000421263 ERMP1Q7Z2K6 904 aa20.35■□□□□ 0.85
VARS2-202ENST00000421263 CCDC65Q8IXS2 484 aa20.35■□□□□ 0.85
VARS2-202ENST00000421263 TMEM86AQ8N2M4 240 aa20.35■□□□□ 0.85
VARS2-202ENST00000421263 CSGALNACT2Q8N6G5 542 aa20.35■□□□□ 0.85
VARS2-202ENST00000421263 SPATA18Q8TC71 538 aa20.35■□□□□ 0.85
VARS2-202ENST00000421263 GIPC2Q8TF65 315 aa20.35■□□□□ 0.85
VARS2-202ENST00000421263 LEO1Q8WVC0 666 aaPredicted RBP20.35■□□□□ 0.85
VARS2-202ENST00000421263 PKMYT1Q99640 499 aa20.35■□□□□ 0.85
VARS2-202ENST00000421263 EPC1Q9H2F5 836 aa20.35■□□□□ 0.85
VARS2-202ENST00000421263 TNMDQ9H2S6 317 aa20.35■□□□□ 0.85
VARS2-202ENST00000421263 PCIF1Q9H4Z3 704 aa20.35■□□□□ 0.85
VARS2-202ENST00000421263 PDE11AQ9HCR9 933 aa20.35■□□□□ 0.85
VARS2-202ENST00000421263 ABI2Q9NYB9 513 aaPredicted RBP20.35■□□□□ 0.85
VARS2-202ENST00000421263 SIX4Q9UIU6 781 aa20.35■□□□□ 0.85
VARS2-202ENST00000421263 ZMYM5Q9UJ78 669 aa20.35■□□□□ 0.85
VARS2-202ENST00000421263 ITGA11Q9UKX5 1188 aa20.35■□□□□ 0.85
VARS2-202ENST00000421263 GPR179Q6PRD1 2367 aa20.35■□□□□ 0.85
VARS2-202ENST00000421263 DPYSL4O14531 572 aa20.34■□□□□ 0.85
VARS2-202ENST00000421263 GABRDO14764 452 aa20.34■□□□□ 0.85
VARS2-202ENST00000421263 SPTLC2O15270 562 aa20.34■□□□□ 0.85
VARS2-202ENST00000421263 PRAMEF12O95522 483 aa20.34■□□□□ 0.85
VARS2-202ENST00000421263 CYP4F8P98187 520 aa20.34■□□□□ 0.85
VARS2-202ENST00000421263 STK38Q15208 465 aa20.34■□□□□ 0.85
VARS2-202ENST00000421263 NFE2Q16621 373 aaPredicted RBP20.34■□□□□ 0.85
VARS2-202ENST00000421263 WDR44Q5JSH3 913 aa20.34■□□□□ 0.85
VARS2-202ENST00000421263 CNNM4Q6P4Q7 775 aa20.34■□□□□ 0.85
VARS2-202ENST00000421263 RALGPS2Q86X27 583 aaPredicted RBP20.34■□□□□ 0.85
VARS2-202ENST00000421263 KIAA2013Q8IYS2 634 aa20.34■□□□□ 0.85
VARS2-202ENST00000421263 GPD1LQ8N335 351 aa20.34■□□□□ 0.85
VARS2-202ENST00000421263 BPIFB1Q8TDL5 484 aa20.34■□□□□ 0.85
VARS2-202ENST00000421263 LRRC27Q9C0I9 530 aa20.34■□□□□ 0.85
VARS2-202ENST00000421263 CUEDC2Q9H467 287 aa20.34■□□□□ 0.85
VARS2-202ENST00000421263 TFIP11Q9UBB9 837 aaKnown RBP20.34■□□□□ 0.85
VARS2-202ENST00000421263 SLC38A8A6NNN8 435 aa20.33■□□□□ 0.85
VARS2-202ENST00000421263 SOBPA7XYQ1 873 aa20.33■□□□□ 0.85
VARS2-202ENST00000421263 HUS1O60921 280 aa20.33■□□□□ 0.85
VARS2-202ENST00000421263 HOXD13P35453 343 aa20.33■□□□□ 0.85
VARS2-202ENST00000421263 SOX9P48436 509 aa20.33■□□□□ 0.85
VARS2-202ENST00000421263 RBP5P82980 135 aa20.33■□□□□ 0.85
VARS2-202ENST00000421263 TSPY1Q01534 308 aa20.33■□□□□ 0.85
VARS2-202ENST00000421263 TAF12Q16514 161 aa20.33■□□□□ 0.85
VARS2-202ENST00000421263 TXNDC11Q6PKC3 985 aa20.33■□□□□ 0.85
VARS2-202ENST00000421263 LIMS2Q7Z4I7 341 aa20.33■□□□□ 0.85
VARS2-202ENST00000421263 CMTM8Q8IZV2 173 aa20.33■□□□□ 0.85
VARS2-202ENST00000421263 GLIS3Q8NEA6 775 aa20.33■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms