RNA–Protein interactions for RNA: ENST00000421069.5

VPS8-202, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 5

Gene VPS8, Length 552 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-202ENST00000421069 Q8NA96 180 aa5.61□□□□□ -1.51
VPS8-202ENST00000421069 CPT1CQ8TCG5 803 aa5.61□□□□□ -1.51
VPS8-202ENST00000421069 ZNF483Q8TF39 744 aaPredicted RBP5.61□□□□□ -1.51
VPS8-202ENST00000421069 SPSB4Q96A44 273 aa5.61□□□□□ -1.51
VPS8-202ENST00000421069 MESP1Q9BRJ9 268 aa5.61□□□□□ -1.51
VPS8-202ENST00000421069 EIF2AQ9BY44 585 aaKnown RBP5.61□□□□□ -1.51
VPS8-202ENST00000421069 WDR12Q9GZL7 423 aaKnown RBP5.61□□□□□ -1.51
VPS8-202ENST00000421069 MS4A7Q9GZW8 240 aaPredicted RBP5.61□□□□□ -1.51
VPS8-202ENST00000421069 KLC2Q9H0B6 622 aa5.61□□□□□ -1.51
VPS8-202ENST00000421069 VPS11Q9H270 941 aa5.61□□□□□ -1.51
VPS8-202ENST00000421069 ZNF703Q9H7S9 590 aaPredicted RBP5.61□□□□□ -1.51
VPS8-202ENST00000421069 XPNPEP3Q9NQH7 507 aa5.61□□□□□ -1.51
VPS8-202ENST00000421069 MRPS18AQ9NVS2 196 aaKnown RBP5.61□□□□□ -1.51
VPS8-202ENST00000421069 GPRC5BQ9NZH0 403 aa5.61□□□□□ -1.51
VPS8-202ENST00000421069 TRPM5Q9NZQ8 1165 aa5.61□□□□□ -1.51
VPS8-202ENST00000421069 VSX1Q9NZR4 365 aaPredicted RBP5.61□□□□□ -1.51
VPS8-202ENST00000421069 RNF181Q9P0P0 153 aa5.61□□□□□ -1.51
VPS8-202ENST00000421069 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.61□□□□□ -1.51
VPS8-202ENST00000421069 SPATA31A3Q5VYP0 1347 aa5.6□□□□□ -1.51
VPS8-202ENST00000421069 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5.6□□□□□ -1.51
VPS8-202ENST00000421069 LOC102724159A0A0B4J2E5 919 aa5.6□□□□□ -1.51
VPS8-202ENST00000421069 A0A1W2PS29 197 aa5.6□□□□□ -1.51
VPS8-202ENST00000421069 CCDC78A2IDD5 438 aa5.6□□□□□ -1.51
VPS8-202ENST00000421069 TMEM233B4DJY2 109 aa5.6□□□□□ -1.51
VPS8-202ENST00000421069 RNASET2O00584 256 aaKnown RBP5.6□□□□□ -1.51
VPS8-202ENST00000421069 CFIP05156 583 aa5.6□□□□□ -1.51
VPS8-202ENST00000421069 ELANEP08246 267 aa5.6□□□□□ -1.51
VPS8-202ENST00000421069 PPM1AP35813 382 aa5.6□□□□□ -1.51
VPS8-202ENST00000421069 CARSP49589 748 aaKnown RBP5.6□□□□□ -1.51
VPS8-202ENST00000421069 ANXA11P50995 505 aaKnown RBP5.6□□□□□ -1.51
VPS8-202ENST00000421069 HSD11B2P80365 405 aa5.6□□□□□ -1.51
VPS8-202ENST00000421069 STK3Q13188 491 aa5.6□□□□□ -1.51
VPS8-202ENST00000421069 PMS2P11Q13670 270 aa5.6□□□□□ -1.51
VPS8-202ENST00000421069 PWP2Q15269 919 aaKnown RBP5.6□□□□□ -1.51
VPS8-202ENST00000421069 ARL13BQ3SXY8 428 aa5.6□□□□□ -1.51
VPS8-202ENST00000421069 FAM83BQ5T0W9 1011 aa5.6□□□□□ -1.51
VPS8-202ENST00000421069 KLHDC7AQ5VTJ3 777 aa5.6□□□□□ -1.51
VPS8-202ENST00000421069 ZNF585AQ6P3V2 769 aa5.6□□□□□ -1.51
VPS8-202ENST00000421069 CATSPERGQ6ZRH7 1159 aa5.6□□□□□ -1.51
VPS8-202ENST00000421069 RNF44Q7L0R7 432 aa5.6□□□□□ -1.51
VPS8-202ENST00000421069 TMPRSS9Q7Z410 1059 aa5.6□□□□□ -1.51
VPS8-202ENST00000421069 CLNKQ7Z7G1 428 aa5.6□□□□□ -1.51
VPS8-202ENST00000421069 MYLK4Q86YV6 388 aaPredicted RBP5.6□□□□□ -1.51
VPS8-202ENST00000421069 YAF2Q8IY57 180 aa5.6□□□□□ -1.51
VPS8-202ENST00000421069 TMEM132CQ8N3T6 1108 aa5.6□□□□□ -1.51
VPS8-202ENST00000421069 PSD4Q8NDX1 1056 aa5.6□□□□□ -1.51
VPS8-202ENST00000421069 KIAA1191Q96A73 305 aa5.6□□□□□ -1.51
VPS8-202ENST00000421069 BOD1Q96IK1 185 aa5.6□□□□□ -1.51
VPS8-202ENST00000421069 LRIG1Q96JA1 1093 aa5.6□□□□□ -1.51
VPS8-202ENST00000421069 SLC46A1Q96NT5 459 aa5.6□□□□□ -1.51
VPS8-202ENST00000421069 CDK5RAP1Q96SZ6 601 aaKnown RBP5.6□□□□□ -1.51
VPS8-202ENST00000421069 ZSWIM1Q9BR11 485 aa5.6□□□□□ -1.51
VPS8-202ENST00000421069 STK31Q9BXU1 1019 aa5.6□□□□□ -1.51
VPS8-202ENST00000421069 DHX36Q9H2U1 1008 aaKnown RBP5.6□□□□□ -1.51
VPS8-202ENST00000421069 ZSCAN32Q9NX65 697 aa5.6□□□□□ -1.51
VPS8-202ENST00000421069 LRCH1Q9Y2L9 728 aa5.6□□□□□ -1.51
VPS8-202ENST00000421069 RAD54BQ9Y620 910 aa5.6□□□□□ -1.51
VPS8-202ENST00000421069 AATKQ6ZMQ8 1374 aa5.59□□□□□ -1.51
VPS8-202ENST00000421069 LOC102723971A0A1B0GUV8 181 aa5.59□□□□□ -1.51
VPS8-202ENST00000421069 MYADML2A6NDP7 307 aa5.59□□□□□ -1.51
VPS8-202ENST00000421069 MARCH11A6NNE9 402 aa5.59□□□□□ -1.51
VPS8-202ENST00000421069 DCLK1O15075 740 aa5.59□□□□□ -1.51
VPS8-202ENST00000421069 MUSKO15146 869 aa5.59□□□□□ -1.51
VPS8-202ENST00000421069 CCP110O43303 1012 aa5.59□□□□□ -1.51
VPS8-202ENST00000421069 VPS4BO75351 444 aa5.59□□□□□ -1.51
VPS8-202ENST00000421069 SUN1O94901 812 aa5.59□□□□□ -1.51
VPS8-202ENST00000421069 INMTO95050 263 aa5.59□□□□□ -1.51
VPS8-202ENST00000421069 HARSP12081 509 aaKnown RBP5.59□□□□□ -1.51
VPS8-202ENST00000421069 ABCB4P21439 1286 aa5.59□□□□□ -1.51
VPS8-202ENST00000421069 GCLCP48506 637 aaPredicted RBP5.59□□□□□ -1.51
VPS8-202ENST00000421069 CTSWP56202 376 aa5.59□□□□□ -1.51
VPS8-202ENST00000421069 SATB1Q01826 763 aa5.59□□□□□ -1.51
VPS8-202ENST00000421069 BOP1Q14137 746 aaKnown RBP5.59□□□□□ -1.51
VPS8-202ENST00000421069 FBLN7Q53RD9 439 aa5.59□□□□□ -1.51
VPS8-202ENST00000421069 B3GNTL1Q67FW5 361 aaPredicted RBP5.59□□□□□ -1.51
VPS8-202ENST00000421069 TAF2Q6P1X5 1199 aa5.59□□□□□ -1.51
VPS8-202ENST00000421069 FANCBQ8NB91 859 aa5.59□□□□□ -1.51
VPS8-202ENST00000421069 NSUN7Q8NE18 718 aaKnown RBP5.59□□□□□ -1.51
VPS8-202ENST00000421069 DVL3Q92997 716 aaPredicted RBP5.59□□□□□ -1.51
VPS8-202ENST00000421069 TMEM41AQ96HV5 264 aa5.59□□□□□ -1.51
VPS8-202ENST00000421069 PPP1R9BQ96SB3 815 aa5.59□□□□□ -1.51
VPS8-202ENST00000421069 POLR3GLQ9BT43 218 aa5.59□□□□□ -1.51
VPS8-202ENST00000421069 TEX101Q9BY14 249 aa5.59□□□□□ -1.51
VPS8-202ENST00000421069 TMEM74BQ9NUR3 256 aa5.59□□□□□ -1.51
VPS8-202ENST00000421069 SMPD4Q9NXE4 827 aa5.59□□□□□ -1.51
VPS8-202ENST00000421069 ZNF212Q9UDV6 495 aa5.59□□□□□ -1.51
VPS8-202ENST00000421069 ITGB1BP2Q9UKP3 347 aa5.59□□□□□ -1.51
VPS8-202ENST00000421069 CAPN11Q9UMQ6 739 aa5.59□□□□□ -1.51
VPS8-202ENST00000421069 SHOC2Q9UQ13 582 aa5.59□□□□□ -1.51
VPS8-202ENST00000421069 PRAMEF33A0A0G2JMD5 474 aa5.58□□□□□ -1.52
VPS8-202ENST00000421069 F5H423 210 aaPredicted RBP5.58□□□□□ -1.52
VPS8-202ENST00000421069 HNRNPDLO14979 420 aaKnown RBP5.58□□□□□ -1.52
VPS8-202ENST00000421069 ADAMTS3O15072 1205 aa5.58□□□□□ -1.52
VPS8-202ENST00000421069 PLA2G6O60733 806 aa5.58□□□□□ -1.52
VPS8-202ENST00000421069 PRAMEF10O60809 474 aa5.58□□□□□ -1.52
VPS8-202ENST00000421069 ERN1O75460 977 aaKnown RBP5.58□□□□□ -1.52
VPS8-202ENST00000421069 RASSF9O75901 435 aa5.58□□□□□ -1.52
VPS8-202ENST00000421069 HLA-DOAP06340 250 aa5.58□□□□□ -1.52
VPS8-202ENST00000421069 BTF3P20290 206 aaKnown RBP5.58□□□□□ -1.52
VPS8-202ENST00000421069 EEF1GP26641 437 aaKnown RBP5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms