RNA–Protein interactions for RNA: ENST00000420455.5

TMEM50B-201, Transcript of transmembrane protein 50B, humanhuman

TSL 1 (best)

Gene TMEM50B, Length 3,062 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-201ENST00000420455 MAMLD1Q13495 774 aa14.22□□□□□ -0.13
TMEM50B-201ENST00000420455 ZNF618Q5T7W0 954 aa14.22□□□□□ -0.13
TMEM50B-201ENST00000420455 CCDC181Q5TID7 509 aa14.22□□□□□ -0.13
TMEM50B-201ENST00000420455 TMEM35BQ8NCS4 154 aa14.22□□□□□ -0.13
TMEM50B-201ENST00000420455 PARP2Q9UGN5 583 aa14.22□□□□□ -0.13
TMEM50B-201ENST00000420455 A0A0U1RQF3 1178 aa14.22□□□□□ -0.13
TMEM50B-201ENST00000420455 ATF7P17544 494 aaPredicted RBP14.22□□□□□ -0.13
TMEM50B-201ENST00000420455 RNASE9P60153 205 aaKnown RBP14.22□□□□□ -0.13
TMEM50B-201ENST00000420455 SOWAHAQ2M3V2 549 aa14.22□□□□□ -0.13
TMEM50B-201ENST00000420455 PKDCCQ504Y2 493 aa14.22□□□□□ -0.13
TMEM50B-201ENST00000420455 CCNI2Q6ZMN8 369 aaPredicted RBP14.22□□□□□ -0.13
TMEM50B-201ENST00000420455 AGMOQ6ZNB7 445 aa14.22□□□□□ -0.13
TMEM50B-201ENST00000420455 CARD9Q9H257 536 aa14.22□□□□□ -0.13
TMEM50B-201ENST00000420455 LCMT1Q9UIC8 334 aa14.22□□□□□ -0.13
TMEM50B-201ENST00000420455 O00370 1275 aa14.21□□□□□ -0.13
TMEM50B-201ENST00000420455 SPTLC1O15269 473 aa14.21□□□□□ -0.13
TMEM50B-201ENST00000420455 CALB1P05937 261 aa14.21□□□□□ -0.13
TMEM50B-201ENST00000420455 CD52P31358 61 aa14.21□□□□□ -0.13
TMEM50B-201ENST00000420455 CTNNA1P35221 906 aaKnown RBP14.21□□□□□ -0.13
TMEM50B-201ENST00000420455 NDST1P52848 882 aa14.21□□□□□ -0.13
TMEM50B-201ENST00000420455 PAK2Q13177 524 aa14.21□□□□□ -0.13
TMEM50B-201ENST00000420455 GLRA4Q5JXX5 417 aa14.21□□□□□ -0.13
TMEM50B-201ENST00000420455 KBTBD7Q8WVZ9 684 aa14.21□□□□□ -0.13
TMEM50B-201ENST00000420455 ZNF560Q96MR9 790 aa14.21□□□□□ -0.13
TMEM50B-201ENST00000420455 WNT8AQ9H1J5 351 aa14.21□□□□□ -0.13
TMEM50B-201ENST00000420455 SLC38A7Q9NVC3 462 aa14.21□□□□□ -0.13
TMEM50B-201ENST00000420455 KLK14Q9P0G3 267 aa14.21□□□□□ -0.13
TMEM50B-201ENST00000420455 ADAM22Q9P0K1 906 aa14.21□□□□□ -0.13
TMEM50B-201ENST00000420455 CYTH4Q9UIA0 394 aa14.21□□□□□ -0.13
TMEM50B-201ENST00000420455 SCINQ9Y6U3 715 aa14.21□□□□□ -0.13
TMEM50B-201ENST00000420455 CEP350Q5VT06 3117 aa14.21□□□□□ -0.13
TMEM50B-201ENST00000420455 ITGA4P13612 1032 aa14.21□□□□□ -0.13
TMEM50B-201ENST00000420455 MAN1A1P33908 653 aa14.21□□□□□ -0.13
TMEM50B-201ENST00000420455 PAFAH1B1P43034 410 aa14.21□□□□□ -0.13
TMEM50B-201ENST00000420455 STILQ15468 1287 aa14.21□□□□□ -0.13
TMEM50B-201ENST00000420455 ZNF394Q53GI3 561 aa14.21□□□□□ -0.13
TMEM50B-201ENST00000420455 LIN9Q5TKA1 542 aa14.21□□□□□ -0.13
TMEM50B-201ENST00000420455 DENND1BQ6P3S1 775 aa14.21□□□□□ -0.13
TMEM50B-201ENST00000420455 LCLAT1Q6UWP7 414 aa14.21□□□□□ -0.13
TMEM50B-201ENST00000420455 DPH6Q7L8W6 267 aa14.21□□□□□ -0.13
TMEM50B-201ENST00000420455 ZNF598Q86UK7 904 aaKnown RBP14.21□□□□□ -0.13
TMEM50B-201ENST00000420455 HACE1Q8IYU2 909 aa14.21□□□□□ -0.13
TMEM50B-201ENST00000420455 MRPL45Q9BRJ2 306 aaKnown RBP14.21□□□□□ -0.13
TMEM50B-201ENST00000420455 OGDHLQ9ULD0 1010 aa14.21□□□□□ -0.13
TMEM50B-201ENST00000420455 TSC2P49815 1807 aa14.21□□□□□ -0.13
TMEM50B-201ENST00000420455 SLC1A1P43005 524 aa14.21□□□□□ -0.14
TMEM50B-201ENST00000420455 MBTPS1Q14703 1052 aa14.21□□□□□ -0.14
TMEM50B-201ENST00000420455 CPNE8Q86YQ8 564 aa14.21□□□□□ -0.14
TMEM50B-201ENST00000420455 PASD1Q8IV76 773 aa14.21□□□□□ -0.14
TMEM50B-201ENST00000420455 CRYBG2Q8N1P7 616 aa14.21□□□□□ -0.14
TMEM50B-201ENST00000420455 RUBCNQ92622 972 aa14.21□□□□□ -0.14
TMEM50B-201ENST00000420455 APOL6Q9BWW8 343 aa14.21□□□□□ -0.14
TMEM50B-201ENST00000420455 NT5C1AQ9BXI3 368 aa14.21□□□□□ -0.14
TMEM50B-201ENST00000420455 MRPL47Q9HD33 250 aaKnown RBP14.21□□□□□ -0.14
TMEM50B-201ENST00000420455 PARVAQ9NVD7 372 aa14.21□□□□□ -0.14
TMEM50B-201ENST00000420455 TRIM17Q9Y577 477 aa14.21□□□□□ -0.14
TMEM50B-201ENST00000420455 PCDHA3Q9Y5H8 950 aa14.21□□□□□ -0.14
TMEM50B-201ENST00000420455 ZSCAN5CA6NGD5 496 aaPredicted RBP14.2□□□□□ -0.14
TMEM50B-201ENST00000420455 MEIS3P2A8K0S8 358 aa14.2□□□□□ -0.14
TMEM50B-201ENST00000420455 KPNA7A9QM74 516 aa14.2□□□□□ -0.14
TMEM50B-201ENST00000420455 GLI1P08151 1106 aa14.2□□□□□ -0.14
TMEM50B-201ENST00000420455 SKIP12755 728 aa14.2□□□□□ -0.14
TMEM50B-201ENST00000420455 COMTP21964 271 aa14.2□□□□□ -0.14
TMEM50B-201ENST00000420455 GPD2P43304 727 aa14.2□□□□□ -0.14
TMEM50B-201ENST00000420455 CASP8Q14790 479 aa14.2□□□□□ -0.14
TMEM50B-201ENST00000420455 SV2CQ496J9 727 aa14.2□□□□□ -0.14
TMEM50B-201ENST00000420455 MMS22LQ6ZRQ5 1243 aa14.2□□□□□ -0.14
TMEM50B-201ENST00000420455 TOP6BLQ8N6T0 577 aa14.2□□□□□ -0.14
TMEM50B-201ENST00000420455 C1orf131Q8NDD1 294 aaKnown RBP14.2□□□□□ -0.14
TMEM50B-201ENST00000420455 AENQ8WTP8 325 aaKnown RBP14.2□□□□□ -0.14
TMEM50B-201ENST00000420455 ALG3Q92685 438 aa14.2□□□□□ -0.14
TMEM50B-201ENST00000420455 TRPV6Q9H1D0 765 aa14.2□□□□□ -0.14
TMEM50B-201ENST00000420455 STARD7Q9NQZ5 370 aa14.2□□□□□ -0.14
TMEM50B-201ENST00000420455 RGS18Q9NS28 235 aa14.2□□□□□ -0.14
TMEM50B-201ENST00000420455 TANC1Q9C0D5 1861 aa14.2□□□□□ -0.14
TMEM50B-201ENST00000420455 ARL5CA6NH57 179 aa14.2□□□□□ -0.14
TMEM50B-201ENST00000420455 H3BQF6 201 aa14.2□□□□□ -0.14
TMEM50B-201ENST00000420455 ERLIN1O75477 346 aa14.2□□□□□ -0.14
TMEM50B-201ENST00000420455 AARSP49588 968 aaKnown RBP eCLIP14.2□□□□□ -0.14
TMEM50B-201ENST00000420455 TAF6P49848 677 aa14.2□□□□□ -0.14
TMEM50B-201ENST00000420455 ARHGAP17Q68EM7 881 aa14.2□□□□□ -0.14
TMEM50B-201ENST00000420455 UBN1Q9NPG3 1134 aa14.2□□□□□ -0.14
TMEM50B-201ENST00000420455 STIM2Q9P246 746 aa14.2□□□□□ -0.14
TMEM50B-201ENST00000420455 MICAL2O94851 1124 aa14.19□□□□□ -0.14
TMEM50B-201ENST00000420455 PFKMP08237 780 aa14.19□□□□□ -0.14
TMEM50B-201ENST00000420455 GHRP10912 638 aa14.19□□□□□ -0.14
TMEM50B-201ENST00000420455 WARSP23381 471 aaKnown RBP14.19□□□□□ -0.14
TMEM50B-201ENST00000420455 RPL34P49207 117 aaKnown RBP14.19□□□□□ -0.14
TMEM50B-201ENST00000420455 LILRA4P59901 499 aa14.19□□□□□ -0.14
TMEM50B-201ENST00000420455 FAM189BP81408 668 aa14.19□□□□□ -0.14
TMEM50B-201ENST00000420455 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.19□□□□□ -0.146e-15■■■□□ 17.6
TMEM50B-201ENST00000420455 C11orf70Q9BRQ4 267 aa14.19□□□□□ -0.14
TMEM50B-201ENST00000420455 SELENOOQ9BVL4 669 aa14.19□□□□□ -0.14
TMEM50B-201ENST00000420455 UNC93B1Q9H1C4 597 aa14.19□□□□□ -0.14
TMEM50B-201ENST00000420455 MIOSQ9NXC5 875 aa14.19□□□□□ -0.14
TMEM50B-201ENST00000420455 SNX9Q9Y5X1 595 aa14.19□□□□□ -0.14
TMEM50B-201ENST00000420455 TMEM191CA6NGB0 347 aa14.19□□□□□ -0.14
TMEM50B-201ENST00000420455 PROSCO94903 275 aa14.19□□□□□ -0.14
TMEM50B-201ENST00000420455 TAP1Q03518 808 aa14.19□□□□□ -0.14
TMEM50B-201ENST00000420455 NFX1Q12986 1120 aaKnown RBP14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms