RNA–Protein interactions for RNA: ENST00000419459.1

LINC00642-201, long intergenic non-protein coding RNA 642, humanhuman

TSL 2 BASIC

Gene LINC00642, Length 2,026 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00642-201ENST00000419459 GLI1P08151 1106 aa13.69□□□□□ -0.22
LINC00642-201ENST00000419459 EZRP15311 586 aaKnown RBP13.69□□□□□ -0.22
LINC00642-201ENST00000419459 IFT88Q13099 833 aa13.69□□□□□ -0.22
LINC00642-201ENST00000419459 CRYMQ14894 314 aa13.69□□□□□ -0.22
LINC00642-201ENST00000419459 MFSD5Q6N075 450 aa13.69□□□□□ -0.22
LINC00642-201ENST00000419459 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.69□□□□□ -0.22
LINC00642-201ENST00000419459 SLC24A5Q71RS6 500 aa13.69□□□□□ -0.22
LINC00642-201ENST00000419459 OTOP2Q7RTS6 562 aa13.69□□□□□ -0.22
LINC00642-201ENST00000419459 APBB1IPQ7Z5R6 666 aaPredicted RBP13.69□□□□□ -0.22
LINC00642-201ENST00000419459 ECHDC2Q86YB7 292 aa13.69□□□□□ -0.22
LINC00642-201ENST00000419459 GPIHBP1Q8IV16 184 aa13.69□□□□□ -0.22
LINC00642-201ENST00000419459 GSTCDQ8NEC7 633 aa13.69□□□□□ -0.22
LINC00642-201ENST00000419459 SYN2Q92777 582 aaPredicted RBP13.69□□□□□ -0.22
LINC00642-201ENST00000419459 DPF3Q92784 378 aa13.69□□□□□ -0.22
LINC00642-201ENST00000419459 LRRC45Q96CN5 670 aa13.69□□□□□ -0.22
LINC00642-201ENST00000419459 KIF12Q96FN5 646 aa13.69□□□□□ -0.22
LINC00642-201ENST00000419459 CCDC114Q96M63 670 aa13.69□□□□□ -0.22
LINC00642-201ENST00000419459 CGRRF1Q99675 332 aa13.69□□□□□ -0.22
LINC00642-201ENST00000419459 CD248Q9HCU0 757 aa13.69□□□□□ -0.22
LINC00642-201ENST00000419459 TUBGCP4Q9UGJ1 667 aa13.69□□□□□ -0.22
LINC00642-201ENST00000419459 INPP5FQ9Y2H2 1132 aa13.69□□□□□ -0.22
LINC00642-201ENST00000419459 MYH10P35580 1976 aa13.69□□□□□ -0.22
LINC00642-201ENST00000419459 REV3LO60673 3130 aa13.69□□□□□ -0.22
LINC00642-201ENST00000419459 ARL5CA6NH57 179 aa13.69□□□□□ -0.22
LINC00642-201ENST00000419459 E7EVH7 732 aa13.69□□□□□ -0.22
LINC00642-201ENST00000419459 ENPP3O14638 875 aa13.69□□□□□ -0.22
LINC00642-201ENST00000419459 PTGESO14684 152 aa13.69□□□□□ -0.22
LINC00642-201ENST00000419459 UPP2O95045 317 aa13.69□□□□□ -0.22
LINC00642-201ENST00000419459 MYZAPP0CAP1 466 aa13.69□□□□□ -0.22
LINC00642-201ENST00000419459 ITGA4P13612 1032 aa13.69□□□□□ -0.22
LINC00642-201ENST00000419459 GATMP50440 423 aa13.69□□□□□ -0.22
LINC00642-201ENST00000419459 CLDN10P78369 228 aa13.69□□□□□ -0.22
LINC00642-201ENST00000419459 GUCY2DQ02846 1103 aa13.69□□□□□ -0.22
LINC00642-201ENST00000419459 ASTE1Q2TB18 679 aaPredicted RBP13.69□□□□□ -0.22
LINC00642-201ENST00000419459 ALKAL1Q6UXT8 129 aa13.69□□□□□ -0.22
LINC00642-201ENST00000419459 PARP9Q8IXQ6 854 aa13.69□□□□□ -0.22
LINC00642-201ENST00000419459 SEMA4DQ92854 862 aa13.69□□□□□ -0.22
LINC00642-201ENST00000419459 MIEF2Q96C03 454 aa13.69□□□□□ -0.22
LINC00642-201ENST00000419459 FTHL17Q9BXU8 183 aa13.69□□□□□ -0.22
LINC00642-201ENST00000419459 MIOSQ9NXC5 875 aa13.69□□□□□ -0.22
LINC00642-201ENST00000419459 PTPRSQ13332 1948 aa13.69□□□□□ -0.22
LINC00642-201ENST00000419459 SMIM28A0A1B0GU29 152 aa13.68□□□□□ -0.22
LINC00642-201ENST00000419459 TRAPPC3O43617 180 aa13.68□□□□□ -0.22
LINC00642-201ENST00000419459 CST3P01034 146 aaPredicted RBP13.68□□□□□ -0.22
LINC00642-201ENST00000419459 POMCP01189 267 aa13.68□□□□□ -0.22
LINC00642-201ENST00000419459 TMEM191BP0C7N4 346 aa13.68□□□□□ -0.22
LINC00642-201ENST00000419459 SCNN1GP51170 649 aa13.68□□□□□ -0.22
LINC00642-201ENST00000419459 TMEM132DQ14C87 1099 aa13.68□□□□□ -0.22
LINC00642-201ENST00000419459 EXOC3L4Q17RC7 722 aa13.68□□□□□ -0.22
LINC00642-201ENST00000419459 AGBL2Q5U5Z8 902 aa13.68□□□□□ -0.22
LINC00642-201ENST00000419459 KRT39Q6A163 491 aa13.68□□□□□ -0.22
LINC00642-201ENST00000419459 CYB5D1Q6P9G0 228 aa13.68□□□□□ -0.22
LINC00642-201ENST00000419459 GJB7Q6PEY0 223 aa13.68□□□□□ -0.22
LINC00642-201ENST00000419459 USP37Q86T82 979 aa13.68□□□□□ -0.22
LINC00642-201ENST00000419459 WDR49Q8IV35 697 aa13.68□□□□□ -0.22
LINC00642-201ENST00000419459 FUKQ8N0W3 1084 aa13.68□□□□□ -0.22
LINC00642-201ENST00000419459 TRAIPQ9BWF2 469 aa13.68□□□□□ -0.22
LINC00642-201ENST00000419459 TMEM8AQ9HCN3 771 aa13.68□□□□□ -0.22
LINC00642-201ENST00000419459 VNN1O95497 513 aa13.68□□□□□ -0.22
LINC00642-201ENST00000419459 C4BPAP04003 597 aaKnown RBP13.68□□□□□ -0.22
LINC00642-201ENST00000419459 ITGB3P05106 788 aa13.68□□□□□ -0.22
LINC00642-201ENST00000419459 PLEKP08567 350 aaPredicted RBP13.68□□□□□ -0.22
LINC00642-201ENST00000419459 KRT19P08727 400 aa13.68□□□□□ -0.22
LINC00642-201ENST00000419459 FAM153BP0C7A2 387 aa13.68□□□□□ -0.22
LINC00642-201ENST00000419459 PON1P27169 355 aa13.68□□□□□ -0.22
LINC00642-201ENST00000419459 CXCR5P32302 372 aa13.68□□□□□ -0.22
LINC00642-201ENST00000419459 SOX4Q06945 474 aaPredicted RBP13.68□□□□□ -0.22
LINC00642-201ENST00000419459 XRCC4Q13426 336 aa13.68□□□□□ -0.22
LINC00642-201ENST00000419459 MTMR3Q13615 1198 aa13.68□□□□□ -0.22
LINC00642-201ENST00000419459 ZACNQ401N2 412 aa13.68□□□□□ -0.22
LINC00642-201ENST00000419459 FAM153CQ494X1 144 aa13.68□□□□□ -0.22
LINC00642-201ENST00000419459 SPOPLQ6IQ16 392 aa13.68□□□□□ -0.22
LINC00642-201ENST00000419459 C16orf59Q7L2K0 433 aa13.68□□□□□ -0.22
LINC00642-201ENST00000419459 ZNF598Q86UK7 904 aaKnown RBP13.68□□□□□ -0.22
LINC00642-201ENST00000419459 TMEM199Q8N511 208 aa13.68□□□□□ -0.22
LINC00642-201ENST00000419459 C1orf127Q8N9H9 656 aa13.68□□□□□ -0.22
LINC00642-201ENST00000419459 HELQQ8TDG4 1101 aa13.68□□□□□ -0.22
LINC00642-201ENST00000419459 ISCUQ9H1K1 167 aa13.68□□□□□ -0.22
LINC00642-201ENST00000419459 RSAD1Q9HA92 442 aa13.68□□□□□ -0.22
LINC00642-201ENST00000419459 CNTN3Q9P232 1028 aa13.68□□□□□ -0.22
LINC00642-201ENST00000419459 HCSTQ9UBK5 93 aa13.68□□□□□ -0.22
LINC00642-201ENST00000419459 FAM153AQ9UHL3 310 aa13.68□□□□□ -0.22
LINC00642-201ENST00000419459 SLC12A6Q9UHW9 1150 aa13.68□□□□□ -0.22
LINC00642-201ENST00000419459 PDE4DIPQ5VU43 2346 aa13.67□□□□□ -0.22
LINC00642-201ENST00000419459 ZNF623O75123 536 aa13.67□□□□□ -0.22
LINC00642-201ENST00000419459 IL18RAPO95256 599 aa13.67□□□□□ -0.22
LINC00642-201ENST00000419459 IGFBP6P24592 240 aaPredicted RBP13.67□□□□□ -0.22
LINC00642-201ENST00000419459 PIK3CAP42336 1068 aa13.67□□□□□ -0.22
LINC00642-201ENST00000419459 RAB27AP51159 221 aa13.67□□□□□ -0.22
LINC00642-201ENST00000419459 SEC24CP53992 1094 aa13.67□□□□□ -0.22
LINC00642-201ENST00000419459 DEFB103AP81534 67 aa13.67□□□□□ -0.22
LINC00642-201ENST00000419459 KYAT1Q16773 422 aa13.67□□□□□ -0.22
LINC00642-201ENST00000419459 DUOXA2Q1HG44 320 aa13.67□□□□□ -0.22
LINC00642-201ENST00000419459 ANKRD20A8PQ5CZ79 823 aa13.67□□□□□ -0.22
LINC00642-201ENST00000419459 CLLU1OSQ5K130 101 aa13.67□□□□□ -0.22
LINC00642-201ENST00000419459 FAM117BQ6P1L5 589 aa13.67□□□□□ -0.22
LINC00642-201ENST00000419459 CNKSR3Q6P9H4 555 aa13.67□□□□□ -0.22
LINC00642-201ENST00000419459 C15orf39Q6ZRI6 1047 aa13.67□□□□□ -0.22
LINC00642-201ENST00000419459 CASKIN2Q8WXE0 1202 aa13.67□□□□□ -0.22
LINC00642-201ENST00000419459 IFT81Q8WYA0 676 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms