RNA–Protein interactions for RNA: ENST00000418518.2

LINCMD1-201, Transcript of long intergenic non-protein coding RNA, muscle differentiation 1, humanhuman

TSL 5 BASIC

Gene LINCMD1, Length 462 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINCMD1-201ENST00000418518 MYO1EQ12965 1108 aa9.59□□□□□ -0.87
LINCMD1-201ENST00000418518 PIGHQ14442 188 aaPredicted RBP9.59□□□□□ -0.87
LINCMD1-201ENST00000418518 ZNF268Q14587 947 aaPredicted RBP9.59□□□□□ -0.87
LINCMD1-201ENST00000418518 TERF2Q15554 542 aa9.59□□□□□ -0.87
LINCMD1-201ENST00000418518 TRADDQ15628 312 aa9.59□□□□□ -0.87
LINCMD1-201ENST00000418518 FAM153CQ494X1 144 aa9.59□□□□□ -0.87
LINCMD1-201ENST00000418518 C2CD6Q53TS8 623 aa9.59□□□□□ -0.87
LINCMD1-201ENST00000418518 MFSD14CQ5VZR4 134 aa9.59□□□□□ -0.87
LINCMD1-201ENST00000418518 TTC27Q6P3X3 843 aa9.59□□□□□ -0.87
LINCMD1-201ENST00000418518 LRIG3Q6UXM1 1119 aa9.59□□□□□ -0.87
LINCMD1-201ENST00000418518 SYDE1Q6ZW31 735 aaPredicted RBP9.59□□□□□ -0.87
LINCMD1-201ENST00000418518 SESTD1Q86VW0 696 aa9.59□□□□□ -0.87
LINCMD1-201ENST00000418518 ERICH1Q86X53 443 aa9.59□□□□□ -0.87
LINCMD1-201ENST00000418518 IQCKQ8N0W5 287 aa9.59□□□□□ -0.87
LINCMD1-201ENST00000418518 TMEM130Q8N3G9 435 aa9.59□□□□□ -0.87
LINCMD1-201ENST00000418518 BEST2Q8NFU1 509 aa9.59□□□□□ -0.87
LINCMD1-201ENST00000418518 TMEM40Q8WWA1 233 aa9.59□□□□□ -0.87
LINCMD1-201ENST00000418518 MCRS1Q96EZ8 462 aa9.59□□□□□ -0.87
LINCMD1-201ENST00000418518 PKNOX2Q96KN3 472 aa9.59□□□□□ -0.87
LINCMD1-201ENST00000418518 ZMAT2Q96NC0 199 aaKnown RBP9.59□□□□□ -0.87
LINCMD1-201ENST00000418518 MTG1Q9BT17 334 aaPredicted RBP9.59□□□□□ -0.87
LINCMD1-201ENST00000418518 TXLNGYQ9BZA5 131 aa9.59□□□□□ -0.87
LINCMD1-201ENST00000418518 CELF4Q9BZC1 486 aaKnown RBP9.59□□□□□ -0.87
LINCMD1-201ENST00000418518 ZDHHC18Q9NUE0 388 aa9.59□□□□□ -0.87
LINCMD1-201ENST00000418518 SNTG2Q9NY99 539 aa9.59□□□□□ -0.87
LINCMD1-201ENST00000418518 PSD3Q9NYI0 1048 aa9.59□□□□□ -0.87
LINCMD1-201ENST00000418518 HMGXB4Q9UGU5 601 aa9.59□□□□□ -0.87
LINCMD1-201ENST00000418518 FAM153AQ9UHL3 310 aa9.59□□□□□ -0.87
LINCMD1-201ENST00000418518 GTF2IRD1Q9UHL9 959 aa9.59□□□□□ -0.87
LINCMD1-201ENST00000418518 CYTH4Q9UIA0 394 aa9.59□□□□□ -0.87
LINCMD1-201ENST00000418518 UBQLN1Q9UMX0 589 aaKnown RBP9.59□□□□□ -0.87
LINCMD1-201ENST00000418518 UTP11Q9Y3A2 253 aaKnown RBP9.59□□□□□ -0.87
LINCMD1-201ENST00000418518 SRCAPQ6ZRS2 3230 aa9.59□□□□□ -0.87
LINCMD1-201ENST00000418518 PTPRDP23468 1912 aa9.58□□□□□ -0.88
LINCMD1-201ENST00000418518 TCRBV7S2A1N4TA0A589 114 aa9.58□□□□□ -0.88
LINCMD1-201ENST00000418518 GOLGA6BA6NDN3 693 aa9.58□□□□□ -0.88
LINCMD1-201ENST00000418518 MYADML2A6NDP7 307 aa9.58□□□□□ -0.88
LINCMD1-201ENST00000418518 PIRO00625 290 aa9.58□□□□□ -0.88
LINCMD1-201ENST00000418518 DAPK3O43293 454 aa9.58□□□□□ -0.88
LINCMD1-201ENST00000418518 XPOTO43592 962 aaKnown RBP9.58□□□□□ -0.88
LINCMD1-201ENST00000418518 MICAL2O94851 1124 aa9.58□□□□□ -0.88
LINCMD1-201ENST00000418518 CD4P01730 458 aa9.58□□□□□ -0.88
LINCMD1-201ENST00000418518 CD19P15391 556 aa9.58□□□□□ -0.88
LINCMD1-201ENST00000418518 CST5P28325 142 aaPredicted RBP9.58□□□□□ -0.88
LINCMD1-201ENST00000418518 GPD2P43304 727 aa9.58□□□□□ -0.88
LINCMD1-201ENST00000418518 CDH8P55286 799 aa9.58□□□□□ -0.88
LINCMD1-201ENST00000418518 COPS2P61201 443 aa9.58□□□□□ -0.88
LINCMD1-201ENST00000418518 RPL7AP62424 266 aaKnown RBP9.58□□□□□ -0.88
LINCMD1-201ENST00000418518 MRPS6P82932 125 aaKnown RBP9.58□□□□□ -0.88
LINCMD1-201ENST00000418518 ZNF200P98182 395 aaPredicted RBP9.58□□□□□ -0.88
LINCMD1-201ENST00000418518 OGDHQ02218 1023 aa9.58□□□□□ -0.88
LINCMD1-201ENST00000418518 TMEM62Q0P6H9 643 aa9.58□□□□□ -0.88
LINCMD1-201ENST00000418518 MTMR3Q13615 1198 aa9.58□□□□□ -0.88
LINCMD1-201ENST00000418518 ACAP1Q15027 740 aa9.58□□□□□ -0.88
LINCMD1-201ENST00000418518 PKDCCQ504Y2 493 aa9.58□□□□□ -0.88
LINCMD1-201ENST00000418518 ZNF394Q53GI3 561 aa9.58□□□□□ -0.88
LINCMD1-201ENST00000418518 SGO2Q562F6 1265 aa9.58□□□□□ -0.88
LINCMD1-201ENST00000418518 HSP90B2PQ58FF3 399 aa9.58□□□□□ -0.88
LINCMD1-201ENST00000418518 C9orf57Q5W0N0 161 aa9.58□□□□□ -0.88
LINCMD1-201ENST00000418518 LCLAT1Q6UWP7 414 aa9.58□□□□□ -0.88
LINCMD1-201ENST00000418518 POLNQ7Z5Q5 900 aa9.58□□□□□ -0.88
LINCMD1-201ENST00000418518 UNC93AQ86WB7 457 aa9.58□□□□□ -0.88
LINCMD1-201ENST00000418518 XYLT1Q86Y38 959 aa9.58□□□□□ -0.88
LINCMD1-201ENST00000418518 IFT81Q8WYA0 676 aa9.58□□□□□ -0.88
LINCMD1-201ENST00000418518 PIK3R5Q8WYR1 880 aa9.58□□□□□ -0.88
LINCMD1-201ENST00000418518 TRIB2Q92519 343 aa9.58□□□□□ -0.88
LINCMD1-201ENST00000418518 MAGOHBQ96A72 148 aaKnown RBP9.58□□□□□ -0.88
LINCMD1-201ENST00000418518 LRRC45Q96CN5 670 aa9.58□□□□□ -0.88
LINCMD1-201ENST00000418518 RBM41Q96IZ5 413 aaKnown RBP9.58□□□□□ -0.88
LINCMD1-201ENST00000418518 HERPUD2Q9BSE4 406 aa9.58□□□□□ -0.88
LINCMD1-201ENST00000418518 TRIM51Q9BSJ1 452 aa9.58□□□□□ -0.88
LINCMD1-201ENST00000418518 NT5C1AQ9BXI3 368 aa9.58□□□□□ -0.88
LINCMD1-201ENST00000418518 CFHR5Q9BXR6 569 aa9.58□□□□□ -0.88
LINCMD1-201ENST00000418518 NEUROG2Q9H2A3 272 aa9.58□□□□□ -0.88
LINCMD1-201ENST00000418518 NXF3Q9H4D5 531 aaKnown RBP9.58□□□□□ -0.88
LINCMD1-201ENST00000418518 HOMER3Q9NSC5 361 aa9.58□□□□□ -0.88
LINCMD1-201ENST00000418518 GDAP2Q9NXN4 497 aa9.58□□□□□ -0.88
LINCMD1-201ENST00000418518 GRHL1Q9NZI5 618 aa9.58□□□□□ -0.88
LINCMD1-201ENST00000418518 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.58□□□□□ -0.88
LINCMD1-201ENST00000418518 PATJQ8NI35 1801 aa9.58□□□□□ -0.88
LINCMD1-201ENST00000418518 PPEF2O14830 753 aa9.57□□□□□ -0.88
LINCMD1-201ENST00000418518 SEPT4O43236 478 aa9.57□□□□□ -0.88
LINCMD1-201ENST00000418518 OPA1O60313 960 aa9.57□□□□□ -0.88
LINCMD1-201ENST00000418518 HSF2BPO75031 334 aa9.57□□□□□ -0.88
LINCMD1-201ENST00000418518 RNF40O75150 1001 aa9.57□□□□□ -0.88
LINCMD1-201ENST00000418518 ADAMTS4O75173 837 aa9.57□□□□□ -0.88
LINCMD1-201ENST00000418518 PPFIA2O75334 1257 aa9.57□□□□□ -0.88
LINCMD1-201ENST00000418518 FAM163BP0C2L3 166 aa9.57□□□□□ -0.88
LINCMD1-201ENST00000418518 ATF7P17544 494 aaPredicted RBP9.57□□□□□ -0.88
LINCMD1-201ENST00000418518 SSTR3P32745 418 aaPredicted RBP9.57□□□□□ -0.88
LINCMD1-201ENST00000418518 GGCXP38435 758 aa9.57□□□□□ -0.88
LINCMD1-201ENST00000418518 NDST1P52848 882 aa9.57□□□□□ -0.88
LINCMD1-201ENST00000418518 PDCLQ13371 301 aa9.57□□□□□ -0.88
LINCMD1-201ENST00000418518 TAZQ16635 292 aa9.57□□□□□ -0.88
LINCMD1-201ENST00000418518 ARHGAP17Q68EM7 881 aa9.57□□□□□ -0.88
LINCMD1-201ENST00000418518 DRICH1Q6PGQ1 229 aaPredicted RBP9.57□□□□□ -0.88
LINCMD1-201ENST00000418518 CCDC137Q6PK04 289 aaKnown RBP9.57□□□□□ -0.88
LINCMD1-201ENST00000418518 ZDHHC24Q6UX98 284 aa9.57□□□□□ -0.88
LINCMD1-201ENST00000418518 TMC3Q7Z5M5 1100 aa9.57□□□□□ -0.88
LINCMD1-201ENST00000418518 FAM228AQ86W67 206 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms