RNA–Protein interactions for RNA: ENST00000418188.1

CSPG4P3Y-201, Transcript of CSPG4 pseudogene 3 Y-linked, humanhuman

BASIC

Gene CSPG4P3Y, Length 3,724 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P3Y-201ENST00000418188 INO80B-WBP1J3KQ70 363 aa12.33□□□□□ -0.44
CSPG4P3Y-201ENST00000418188 MED7O43513 233 aa12.33□□□□□ -0.44
CSPG4P3Y-201ENST00000418188 ASS1P00966 412 aaKnown RBP12.33□□□□□ -0.44
CSPG4P3Y-201ENST00000418188 KRT7P08729 469 aa12.33□□□□□ -0.44
CSPG4P3Y-201ENST00000418188 KRT3P12035 628 aa12.33□□□□□ -0.44
CSPG4P3Y-201ENST00000418188 VCPP55072 806 aaKnown RBP12.33□□□□□ -0.44
CSPG4P3Y-201ENST00000418188 TGFB2P61812 414 aa12.33□□□□□ -0.44
CSPG4P3Y-201ENST00000418188 SP2Q02086 613 aa12.33□□□□□ -0.44
CSPG4P3Y-201ENST00000418188 CAPSQ13938 189 aa12.33□□□□□ -0.44
CSPG4P3Y-201ENST00000418188 ANGEL2Q5VTE6 544 aaKnown RBP12.33□□□□□ -0.44
CSPG4P3Y-201ENST00000418188 PALM2Q8IXS6 379 aa12.33□□□□□ -0.44
CSPG4P3Y-201ENST00000418188 TTC13Q8NBP0 860 aa12.33□□□□□ -0.44
CSPG4P3Y-201ENST00000418188 CHST13Q8NET6 341 aa12.33□□□□□ -0.44
CSPG4P3Y-201ENST00000418188 FAM167AQ96KS9 214 aa12.33□□□□□ -0.44
CSPG4P3Y-201ENST00000418188 NCAPGQ9BPX3 1015 aa12.33□□□□□ -0.44
CSPG4P3Y-201ENST00000418188 INO80BQ9C086 356 aaPredicted RBP12.33□□□□□ -0.44
CSPG4P3Y-201ENST00000418188 RXFP1Q9HBX9 757 aa12.33□□□□□ -0.44
CSPG4P3Y-201ENST00000418188 SMG5Q9UPR3 1016 aaKnown RBP12.33□□□□□ -0.44
CSPG4P3Y-201ENST00000418188 OGTO15294 1046 aa12.33□□□□□ -0.44
CSPG4P3Y-201ENST00000418188 ATP6V1G2O95670 118 aa12.33□□□□□ -0.44
CSPG4P3Y-201ENST00000418188 CST3P01034 146 aaPredicted RBP12.33□□□□□ -0.44
CSPG4P3Y-201ENST00000418188 PRKCBP05771 671 aa12.33□□□□□ -0.44
CSPG4P3Y-201ENST00000418188 ATP11AP98196 1134 aa12.33□□□□□ -0.44
CSPG4P3Y-201ENST00000418188 DPH6Q7L8W6 267 aa12.33□□□□□ -0.44
CSPG4P3Y-201ENST00000418188 C4orf33Q8N1A6 199 aa12.33□□□□□ -0.44
CSPG4P3Y-201ENST00000418188 ALLCQ8N6M5 410 aa12.33□□□□□ -0.44
CSPG4P3Y-201ENST00000418188 SEPT1Q8WYJ6 367 aa12.33□□□□□ -0.44
CSPG4P3Y-201ENST00000418188 THOC1Q96FV9 657 aaKnown RBP12.33□□□□□ -0.44
CSPG4P3Y-201ENST00000418188 RNF8O76064 485 aa12.33□□□□□ -0.44
CSPG4P3Y-201ENST00000418188 ETS1P14921 441 aa12.33□□□□□ -0.44
CSPG4P3Y-201ENST00000418188 NQO1P15559 274 aaKnown RBP12.33□□□□□ -0.44
CSPG4P3Y-201ENST00000418188 KCNA3P22001 575 aa12.33□□□□□ -0.44
CSPG4P3Y-201ENST00000418188 KLRC2P26717 231 aa12.33□□□□□ -0.44
CSPG4P3Y-201ENST00000418188 TNFSF9P41273 254 aa12.33□□□□□ -0.44
CSPG4P3Y-201ENST00000418188 ARL4CP56559 192 aa12.33□□□□□ -0.44
CSPG4P3Y-201ENST00000418188 IRX3P78415 501 aaPredicted RBP12.33□□□□□ -0.44
CSPG4P3Y-201ENST00000418188 DNAJC3Q13217 504 aa12.33□□□□□ -0.44
CSPG4P3Y-201ENST00000418188 SMTNL2Q2TAL5 461 aa12.33□□□□□ -0.44
CSPG4P3Y-201ENST00000418188 APOBEC3FQ8IUX4 373 aaKnown RBP12.33□□□□□ -0.44
CSPG4P3Y-201ENST00000418188 REPS2Q8NFH8 660 aa12.33□□□□□ -0.44
CSPG4P3Y-201ENST00000418188 ZNF526Q8TF50 670 aaPredicted RBP12.33□□□□□ -0.44
CSPG4P3Y-201ENST00000418188 MAK16Q9BXY0 300 aaKnown RBP12.33□□□□□ -0.44
CSPG4P3Y-201ENST00000418188 HAPLN2Q9GZV7 340 aa12.33□□□□□ -0.44
CSPG4P3Y-201ENST00000418188 IGF2BP3O00425 579 aaKnown RBP eCLIP12.32□□□□□ -0.44
CSPG4P3Y-201ENST00000418188 MGRN1O60291 552 aa12.32□□□□□ -0.44
CSPG4P3Y-201ENST00000418188 ATP4AP20648 1035 aa12.32□□□□□ -0.44
CSPG4P3Y-201ENST00000418188 PSMC1P62191 440 aaKnown RBP12.32□□□□□ -0.44
CSPG4P3Y-201ENST00000418188 ZNF568Q3ZCX4 644 aa12.32□□□□□ -0.44
CSPG4P3Y-201ENST00000418188 RELL1Q8IUW5 271 aa12.32□□□□□ -0.44
CSPG4P3Y-201ENST00000418188 ANKMY2Q8IV38 441 aa12.32□□□□□ -0.44
CSPG4P3Y-201ENST00000418188 NIFKQ9BYG3 293 aaKnown RBP12.32□□□□□ -0.44
CSPG4P3Y-201ENST00000418188 ADAM33Q9BZ11 813 aa12.32□□□□□ -0.44
CSPG4P3Y-201ENST00000418188 PPCSQ9HAB8 311 aa12.32□□□□□ -0.44
CSPG4P3Y-201ENST00000418188 SHOC2Q9UQ13 582 aa12.32□□□□□ -0.44
CSPG4P3Y-201ENST00000418188 DRG1Q9Y295 367 aaKnown RBP12.32□□□□□ -0.44
CSPG4P3Y-201ENST00000418188 UBA1P22314 1058 aaKnown RBP12.32□□□□□ -0.44
CSPG4P3Y-201ENST00000418188 EIF4BP23588 611 aaKnown RBP12.32□□□□□ -0.44
CSPG4P3Y-201ENST00000418188 TCF7P36402 384 aaPredicted RBP12.32□□□□□ -0.44
CSPG4P3Y-201ENST00000418188 MPP2Q14168 576 aa12.32□□□□□ -0.44
CSPG4P3Y-201ENST00000418188 MXD4Q14582 209 aaPredicted RBP12.32□□□□□ -0.44
CSPG4P3Y-201ENST00000418188 MTFR1Q15390 333 aa12.32□□□□□ -0.44
CSPG4P3Y-201ENST00000418188 FYB2Q5VWT5 728 aa12.32□□□□□ -0.44
CSPG4P3Y-201ENST00000418188 IER5Q5VY09 327 aa12.32□□□□□ -0.44
CSPG4P3Y-201ENST00000418188 KIF2BQ8N4N8 673 aa12.32□□□□□ -0.44
CSPG4P3Y-201ENST00000418188 KCTD6Q8NC69 237 aa12.32□□□□□ -0.44
CSPG4P3Y-201ENST00000418188 C12orf42Q96LP6 360 aa12.32□□□□□ -0.44
CSPG4P3Y-201ENST00000418188 NLRP4Q96MN2 994 aa12.32□□□□□ -0.44
CSPG4P3Y-201ENST00000418188 PCDH9Q9HC56 1237 aa12.32□□□□□ -0.44
CSPG4P3Y-201ENST00000418188 PSMC3IPQ9P2W1 217 aaPredicted RBP12.32□□□□□ -0.44
CSPG4P3Y-201ENST00000418188 SPDYE16A6NNV3 312 aaPredicted RBP12.32□□□□□ -0.44
CSPG4P3Y-201ENST00000418188 CST8O60676 142 aa12.32□□□□□ -0.44
CSPG4P3Y-201ENST00000418188 TCF4P15884 667 aa12.32□□□□□ -0.44
CSPG4P3Y-201ENST00000418188 ZNF667Q5HYK9 610 aa12.32□□□□□ -0.44
CSPG4P3Y-201ENST00000418188 DRICH1Q6PGQ1 229 aaPredicted RBP12.32□□□□□ -0.44
CSPG4P3Y-201ENST00000418188 RFX6Q8HWS3 928 aa12.32□□□□□ -0.44
CSPG4P3Y-201ENST00000418188 EXOC8Q8IYI6 725 aa12.32□□□□□ -0.44
CSPG4P3Y-201ENST00000418188 PDIK1LQ8N165 341 aa12.32□□□□□ -0.44
CSPG4P3Y-201ENST00000418188 TACO1Q9BSH4 297 aaKnown RBP12.32□□□□□ -0.44
CSPG4P3Y-201ENST00000418188 CALN1Q9BXU9 219 aa12.32□□□□□ -0.44
CSPG4P3Y-201ENST00000418188 YY1AP1Q9H869 796 aa12.32□□□□□ -0.44
CSPG4P3Y-201ENST00000418188 TXLNGQ9NUQ3 528 aa12.32□□□□□ -0.44
CSPG4P3Y-201ENST00000418188 CNTNAP2Q9UHC6 1331 aa12.32□□□□□ -0.44
CSPG4P3Y-201ENST00000418188 hCG_1818297A0A087WSY0 165 aa12.31□□□□□ -0.44
CSPG4P3Y-201ENST00000418188 CETPP11597 493 aa12.31□□□□□ -0.44
CSPG4P3Y-201ENST00000418188 PREPLQ4J6C6 727 aaPredicted RBP12.31□□□□□ -0.44
CSPG4P3Y-201ENST00000418188 KCNT1Q5JUK3 1230 aa12.31□□□□□ -0.44
CSPG4P3Y-201ENST00000418188 WDR78Q5VTH9 848 aa12.31□□□□□ -0.44
CSPG4P3Y-201ENST00000418188 RHPN2Q8IUC4 686 aa12.31□□□□□ -0.44
CSPG4P3Y-201ENST00000418188 LRRC71Q8N4P6 559 aa12.31□□□□□ -0.44
CSPG4P3Y-201ENST00000418188 ATP11CQ8NB49 1132 aa12.31□□□□□ -0.44
CSPG4P3Y-201ENST00000418188 RSRC1Q96IZ7 334 aaKnown RBP12.31□□□□□ -0.44
CSPG4P3Y-201ENST00000418188 LRRC37BQ96QE4 947 aa12.31□□□□□ -0.44
CSPG4P3Y-201ENST00000418188 RAB3IPQ96QF0 476 aaPredicted RBP12.31□□□□□ -0.44
CSPG4P3Y-201ENST00000418188 C2orf40Q9H1Z8 148 aa12.31□□□□□ -0.44
CSPG4P3Y-201ENST00000418188 ETNK1Q9HBU6 452 aa12.31□□□□□ -0.44
CSPG4P3Y-201ENST00000418188 PCSK1NQ9UHG2 260 aa12.31□□□□□ -0.44
CSPG4P3Y-201ENST00000418188 CNTN6Q9UQ52 1028 aa12.31□□□□□ -0.44
CSPG4P3Y-201ENST00000418188 ICAM3P32942 547 aa12.31□□□□□ -0.44
CSPG4P3Y-201ENST00000418188 CTCFP49711 727 aaPredicted RBP12.31□□□□□ -0.44
CSPG4P3Y-201ENST00000418188 TFDP1Q14186 410 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms