RNA–Protein interactions for RNA: ENST00000417997.1

HMGB3P20-201, Transcript of high mobility group box 3 pseudogene 20, humanhuman

BASIC

Gene HMGB3P20, Length 600 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P20-201ENST00000417997 USP16Q9Y5T5 823 aa4.59□□□□□ -1.67
HMGB3P20-201ENST00000417997 CENPVL1A0A0U1RR11 272 aa4.58□□□□□ -1.68
HMGB3P20-201ENST00000417997 PPFIA2O75334 1257 aa4.58□□□□□ -1.68
HMGB3P20-201ENST00000417997 A1BGP04217 495 aa4.58□□□□□ -1.68
HMGB3P20-201ENST00000417997 RBP3P10745 1247 aa4.58□□□□□ -1.68
HMGB3P20-201ENST00000417997 ZFP36P26651 326 aaKnown RBP4.58□□□□□ -1.68
HMGB3P20-201ENST00000417997 CRHR1P34998 444 aa4.58□□□□□ -1.68
HMGB3P20-201ENST00000417997 MRPS9P82933 396 aaKnown RBP4.58□□□□□ -1.68
HMGB3P20-201ENST00000417997 PURAQ00577 322 aaKnown RBP4.58□□□□□ -1.68
HMGB3P20-201ENST00000417997 NUCB1Q02818 461 aa4.58□□□□□ -1.68
HMGB3P20-201ENST00000417997 OS9Q13438 667 aaPredicted RBP4.58□□□□□ -1.68
HMGB3P20-201ENST00000417997 CSRP2Q16527 193 aa4.58□□□□□ -1.68
HMGB3P20-201ENST00000417997 MST1LQ2TV78 715 aa4.58□□□□□ -1.68
HMGB3P20-201ENST00000417997 BEND3Q5T5X7 828 aa4.58□□□□□ -1.68
HMGB3P20-201ENST00000417997 FAM180AQ6UWF9 173 aa4.58□□□□□ -1.68
HMGB3P20-201ENST00000417997 RHOUQ7L0Q8 258 aa4.58□□□□□ -1.68
HMGB3P20-201ENST00000417997 GPRIN1Q7Z2K8 1008 aa4.58□□□□□ -1.68
HMGB3P20-201ENST00000417997 PLXDC1Q8IUK5 500 aa4.58□□□□□ -1.68
HMGB3P20-201ENST00000417997 GPR156Q8NFN8 814 aa4.58□□□□□ -1.68
HMGB3P20-201ENST00000417997 PLBD2Q8NHP8 589 aa4.58□□□□□ -1.68
HMGB3P20-201ENST00000417997 ZFP28Q8NHY6 868 aa4.58□□□□□ -1.68
HMGB3P20-201ENST00000417997 SLC35B2Q8TB61 432 aa4.58□□□□□ -1.68
HMGB3P20-201ENST00000417997 TSPEARQ8WU66 669 aa4.58□□□□□ -1.68
HMGB3P20-201ENST00000417997 MYEOVQ96EZ4 313 aa4.58□□□□□ -1.68
HMGB3P20-201ENST00000417997 UPF2Q9HAU5 1272 aaKnown RBP4.58□□□□□ -1.68
HMGB3P20-201ENST00000417997 C14orf119Q9NWQ9 140 aa4.58□□□□□ -1.68
HMGB3P20-201ENST00000417997 USP15Q9Y4E8 981 aaPredicted RBP4.58□□□□□ -1.68
HMGB3P20-201ENST00000417997 IBTKQ9P2D0 1353 aaPredicted RBP4.57□□□□□ -1.68
HMGB3P20-201ENST00000417997 UNC119BA6NIH7 251 aa4.57□□□□□ -1.68
HMGB3P20-201ENST00000417997 GRM8O00222 908 aa4.57□□□□□ -1.68
HMGB3P20-201ENST00000417997 ZNF185O15231 689 aa4.57□□□□□ -1.68
HMGB3P20-201ENST00000417997 B3GALT2O43825 422 aa4.57□□□□□ -1.68
HMGB3P20-201ENST00000417997 SPATA31D3P0C874 917 aa4.57□□□□□ -1.68
HMGB3P20-201ENST00000417997 RAP2AP10114 183 aa4.57□□□□□ -1.68
HMGB3P20-201ENST00000417997 MTHFD2P13995 350 aa4.57□□□□□ -1.68
HMGB3P20-201ENST00000417997 BMP5P22003 454 aa4.57□□□□□ -1.68
HMGB3P20-201ENST00000417997 FLT3LGP49771 235 aa4.57□□□□□ -1.68
HMGB3P20-201ENST00000417997 CHN2P52757 468 aa4.57□□□□□ -1.68
HMGB3P20-201ENST00000417997 NANOS3P60323 173 aaKnown RBP4.57□□□□□ -1.68
HMGB3P20-201ENST00000417997 SRSF2Q01130 221 aaKnown RBP4.57□□□□□ -1.68
HMGB3P20-201ENST00000417997 NOMO1Q15155 1222 aa4.57□□□□□ -1.68
HMGB3P20-201ENST00000417997 BMT2Q1RMZ1 405 aa4.57□□□□□ -1.68
HMGB3P20-201ENST00000417997 MUM1Q2TAK8 710 aa4.57□□□□□ -1.68
HMGB3P20-201ENST00000417997 PDCD4Q53EL6 469 aaKnown RBP4.57□□□□□ -1.68
HMGB3P20-201ENST00000417997 HSP90AB4PQ58FF6 505 aa4.57□□□□□ -1.68
HMGB3P20-201ENST00000417997 MUM1L1Q5H9M0 696 aa4.57□□□□□ -1.68
HMGB3P20-201ENST00000417997 ATXN7L2Q5T6C5 722 aaPredicted RBP4.57□□□□□ -1.68
HMGB3P20-201ENST00000417997 DRICH1Q6PGQ1 229 aaPredicted RBP4.57□□□□□ -1.68
HMGB3P20-201ENST00000417997 SPATA31D4Q6ZUB0 917 aa4.57□□□□□ -1.68
HMGB3P20-201ENST00000417997 LHFPL2Q6ZUX7 228 aa4.57□□□□□ -1.68
HMGB3P20-201ENST00000417997 PQLC1Q8N2U9 271 aa4.57□□□□□ -1.68
HMGB3P20-201ENST00000417997 LCORLQ8N3X6 602 aa4.57□□□□□ -1.68
HMGB3P20-201ENST00000417997 AFAP1L2Q8N4X5 818 aa4.57□□□□□ -1.68
HMGB3P20-201ENST00000417997 ATL2Q8NHH9 583 aa4.57□□□□□ -1.68
HMGB3P20-201ENST00000417997 LMBR1Q8WVP7 490 aa4.57□□□□□ -1.68
HMGB3P20-201ENST00000417997 STON2Q8WXE9 905 aa4.57□□□□□ -1.68
HMGB3P20-201ENST00000417997 FATE1Q969F0 183 aa4.57□□□□□ -1.68
HMGB3P20-201ENST00000417997 AHCYL2Q96HN2 611 aaKnown RBP4.57□□□□□ -1.68
HMGB3P20-201ENST00000417997 CRAMP1Q96RY5 1269 aa4.57□□□□□ -1.68
HMGB3P20-201ENST00000417997 ADI1Q9BV57 179 aa4.57□□□□□ -1.68
HMGB3P20-201ENST00000417997 USP44Q9H0E7 712 aa4.57□□□□□ -1.68
HMGB3P20-201ENST00000417997 LDAHQ9H6V9 325 aa4.57□□□□□ -1.68
HMGB3P20-201ENST00000417997 DMRT3Q9NQL9 472 aa4.57□□□□□ -1.68
HMGB3P20-201ENST00000417997 DNAJC28Q9NX36 388 aa4.57□□□□□ -1.68
HMGB3P20-201ENST00000417997 EXOC6BQ9Y2D4 811 aa4.57□□□□□ -1.68
HMGB3P20-201ENST00000417997 CHST2Q9Y4C5 530 aa4.57□□□□□ -1.68
HMGB3P20-201ENST00000417997 COL24A1Q17RW2 1714 aa4.57□□□□□ -1.68
HMGB3P20-201ENST00000417997 COL15A1P39059 1388 aa4.56□□□□□ -1.68
HMGB3P20-201ENST00000417997 A0A1B0GUL6 1792 aa4.56□□□□□ -1.68
HMGB3P20-201ENST00000417997 MAP3K15Q6ZN16 1313 aa4.56□□□□□ -1.68
HMGB3P20-201ENST00000417997 TNS1Q9HBL0 1735 aaKnown RBP4.56□□□□□ -1.68
HMGB3P20-201ENST00000417997 PNMA6EA0A0J9YXQ4 647 aa4.56□□□□□ -1.68
HMGB3P20-201ENST00000417997 GAGE12BA1L429 117 aa4.56□□□□□ -1.68
HMGB3P20-201ENST00000417997 GAGE12HA6NDE8 117 aa4.56□□□□□ -1.68
HMGB3P20-201ENST00000417997 SURF6O75683 361 aaKnown RBP4.56□□□□□ -1.68
HMGB3P20-201ENST00000417997 HLA-DOAP06340 250 aa4.56□□□□□ -1.68
HMGB3P20-201ENST00000417997 NBPF7P0C2Y1 421 aaPredicted RBP4.56□□□□□ -1.68
HMGB3P20-201ENST00000417997 OSMP13725 252 aa4.56□□□□□ -1.68
HMGB3P20-201ENST00000417997 ZSCAN20P17040 1043 aaPredicted RBP4.56□□□□□ -1.68
HMGB3P20-201ENST00000417997 CLRN1P58418 232 aa4.56□□□□□ -1.68
HMGB3P20-201ENST00000417997 MXRA7P84157 204 aa4.56□□□□□ -1.68
HMGB3P20-201ENST00000417997 ATP8B2P98198 1209 aa4.56□□□□□ -1.68
HMGB3P20-201ENST00000417997 GCKRQ14397 625 aa4.56□□□□□ -1.68
HMGB3P20-201ENST00000417997 ADRM1Q16186 407 aa4.56□□□□□ -1.68
HMGB3P20-201ENST00000417997 KRTAP15-1Q3LI76 137 aa4.56□□□□□ -1.68
HMGB3P20-201ENST00000417997 HSP90AB3PQ58FF7 597 aa4.56□□□□□ -1.68
HMGB3P20-201ENST00000417997 FAM47AQ5JRC9 791 aa4.56□□□□□ -1.68
HMGB3P20-201ENST00000417997 HECTD2Q5U5R9 776 aa4.56□□□□□ -1.68
HMGB3P20-201ENST00000417997 UBE3BQ7Z3V4 1068 aa4.56□□□□□ -1.68
HMGB3P20-201ENST00000417997 PPP1R42Q7Z4L9 355 aa4.56□□□□□ -1.68
HMGB3P20-201ENST00000417997 ERC1Q8IUD2 1116 aa4.56□□□□□ -1.68
HMGB3P20-201ENST00000417997 CMTR2Q8IYT2 770 aaKnown RBP4.56□□□□□ -1.68
HMGB3P20-201ENST00000417997 BEND2Q8NDZ0 799 aa4.56□□□□□ -1.68
HMGB3P20-201ENST00000417997 CPEB3Q8NE35 698 aaKnown RBP4.56□□□□□ -1.68
HMGB3P20-201ENST00000417997 OR7D4Q8NG98 312 aa4.56□□□□□ -1.68
HMGB3P20-201ENST00000417997 GPR150Q8NGU9 434 aa4.56□□□□□ -1.68
HMGB3P20-201ENST00000417997 COG1Q8WTW3 980 aa4.56□□□□□ -1.68
HMGB3P20-201ENST00000417997 SUCLG2Q96I99 432 aa4.56□□□□□ -1.68
HMGB3P20-201ENST00000417997 WDR11Q9BZH6 1224 aa4.56□□□□□ -1.68
HMGB3P20-201ENST00000417997 LRRCC1Q9C099 1032 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 585.8 ms