RNA–Protein interactions for RNA: ENST00000417344.2

CCNT1-202, Transcript of cyclin T1, humanhuman

TSL 2

Gene CCNT1, Length 2,017 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1-202ENST00000417344 TFPTP0C1Z6 253 aa6.71□□□□□ -1.33
CCNT1-202ENST00000417344 ITIH2P19823 946 aa6.71□□□□□ -1.33
CCNT1-202ENST00000417344 CA4P22748 312 aa6.71□□□□□ -1.33
CCNT1-202ENST00000417344 CALML3P27482 149 aa6.71□□□□□ -1.33
CCNT1-202ENST00000417344 TKTP29401 623 aaKnown RBP6.71□□□□□ -1.33
CCNT1-202ENST00000417344 HOXA7P31268 230 aaPredicted RBP6.71□□□□□ -1.33
CCNT1-202ENST00000417344 PPARGP37231 505 aaPredicted RBP6.71□□□□□ -1.33
CCNT1-202ENST00000417344 CPA2P48052 419 aa6.71□□□□□ -1.33
CCNT1-202ENST00000417344 NR1H2P55055 460 aa6.71□□□□□ -1.33
CCNT1-202ENST00000417344 NCKAP1LP55160 1127 aa6.71□□□□□ -1.33
CCNT1-202ENST00000417344 MARSP56192 900 aaKnown RBP6.71□□□□□ -1.33
CCNT1-202ENST00000417344 BTKQ06187 659 aa6.71□□□□□ -1.33
CCNT1-202ENST00000417344 DMPKQ09013 629 aa6.71□□□□□ -1.33
CCNT1-202ENST00000417344 ZBTB17Q13105 803 aa6.71□□□□□ -1.33
CCNT1-202ENST00000417344 SEPT6Q14141 434 aa6.71□□□□□ -1.33
CCNT1-202ENST00000417344 TLR1Q15399 786 aa6.71□□□□□ -1.33
CCNT1-202ENST00000417344 SLC1A5Q15758 541 aa6.71□□□□□ -1.33
CCNT1-202ENST00000417344 DNAL1Q4LDG9 190 aa6.71□□□□□ -1.33
CCNT1-202ENST00000417344 FAM91A1Q658Y4 838 aa6.71□□□□□ -1.33
CCNT1-202ENST00000417344 ZNF280DQ6N043 979 aa6.71□□□□□ -1.33
CCNT1-202ENST00000417344 ELMSAN1Q6PJG2 1045 aa6.71□□□□□ -1.33
CCNT1-202ENST00000417344 DCDC5Q6ZRR9 648 aa6.71□□□□□ -1.33
CCNT1-202ENST00000417344 SV2BQ7L1I2 683 aa6.71□□□□□ -1.33
CCNT1-202ENST00000417344 C14orf80Q86SX3 495 aa6.71□□□□□ -1.33
CCNT1-202ENST00000417344 BLIDQ8IZY5 108 aa6.71□□□□□ -1.33
CCNT1-202ENST00000417344 SLC7A5P1Q8MH63 180 aa6.71□□□□□ -1.33
CCNT1-202ENST00000417344 SLC25A41Q8N5S1 370 aa6.71□□□□□ -1.33
CCNT1-202ENST00000417344 UBL4BQ8N7F7 174 aa6.71□□□□□ -1.33
CCNT1-202ENST00000417344 RBM15BQ8NDT2 890 aaKnown RBP6.71□□□□□ -1.33
CCNT1-202ENST00000417344 PPP4R1Q8TF05 950 aa6.71□□□□□ -1.33
CCNT1-202ENST00000417344 CLPTM1LQ96KA5 538 aa6.71□□□□□ -1.33
CCNT1-202ENST00000417344 NSMCE3Q96MG7 304 aa6.71□□□□□ -1.33
CCNT1-202ENST00000417344 CEP63Q96MT8 703 aa6.71□□□□□ -1.33
CCNT1-202ENST00000417344 SH3GL1Q99961 368 aa6.71□□□□□ -1.33
CCNT1-202ENST00000417344 THTPAQ9BU02 230 aa6.71□□□□□ -1.33
CCNT1-202ENST00000417344 TMEM120AQ9BXJ8 343 aa6.71□□□□□ -1.33
CCNT1-202ENST00000417344 NACAP1Q9BZK3 213 aa6.71□□□□□ -1.33
CCNT1-202ENST00000417344 TRABDQ9H4I3 376 aa6.71□□□□□ -1.33
CCNT1-202ENST00000417344 Q9H521 79 aa6.71□□□□□ -1.33
CCNT1-202ENST00000417344 ZNF696Q9H7X3 374 aa6.71□□□□□ -1.33
CCNT1-202ENST00000417344 KANSL2Q9H9L4 492 aa6.71□□□□□ -1.33
CCNT1-202ENST00000417344 C17orf75Q9HAS0 396 aa6.71□□□□□ -1.33
CCNT1-202ENST00000417344 ADAMTS6Q9UKP5 1117 aa6.71□□□□□ -1.33
CCNT1-202ENST00000417344 MTUS1Q9ULD2 1270 aa6.71□□□□□ -1.33
CCNT1-202ENST00000417344 HEMK1Q9Y5R4 338 aaPredicted RBP6.71□□□□□ -1.33
CCNT1-202ENST00000417344 TLL2Q9Y6L7 1015 aa6.71□□□□□ -1.33
CCNT1-202ENST00000417344 CHD1O14646 1710 aa6.71□□□□□ -1.34
CCNT1-202ENST00000417344 PKD1L3Q7Z443 1732 aa6.71□□□□□ -1.34
CCNT1-202ENST00000417344 LMO7Q8WWI1 1683 aa6.71□□□□□ -1.34
CCNT1-202ENST00000417344 ROBO2Q9HCK4 1378 aa6.71□□□□□ -1.34
CCNT1-202ENST00000417344 FAM205AQ6ZU69 1335 aa6.71□□□□□ -1.34
CCNT1-202ENST00000417344 PCDH11YQ9BZA8 1340 aa6.71□□□□□ -1.34
CCNT1-202ENST00000417344 IGSF9BQ9UPX0 1349 aa6.71□□□□□ -1.34
CCNT1-202ENST00000417344 MYH4Q9Y623 1939 aa6.71□□□□□ -1.34
CCNT1-202ENST00000417344 A0A088AWK7 358 aa6.71□□□□□ -1.34
CCNT1-202ENST00000417344 CCDC194A0A1B0GVG4 234 aa6.71□□□□□ -1.34
CCNT1-202ENST00000417344 MYMKA6NI61 221 aa6.71□□□□□ -1.34
CCNT1-202ENST00000417344 GSG1L2A8MUP6 293 aa6.71□□□□□ -1.34
CCNT1-202ENST00000417344 MIF4GDA9UHW6 222 aaKnown RBP6.71□□□□□ -1.34
CCNT1-202ENST00000417344 PEX1O43933 1283 aa6.71□□□□□ -1.34
CCNT1-202ENST00000417344 KDM1AO60341 852 aa6.71□□□□□ -1.34
CCNT1-202ENST00000417344 MGEA5O60502 916 aa6.71□□□□□ -1.34
CCNT1-202ENST00000417344 TOM1O60784 492 aa6.71□□□□□ -1.34
CCNT1-202ENST00000417344 CALM1P0DP23 149 aa6.71□□□□□ -1.34
CCNT1-202ENST00000417344 CALM2P0DP24 149 aa6.71□□□□□ -1.34
CCNT1-202ENST00000417344 CALM3P0DP25 149 aa6.71□□□□□ -1.34
CCNT1-202ENST00000417344 EEF2P13639 858 aaKnown RBP6.71□□□□□ -1.34
CCNT1-202ENST00000417344 CHRNB2P17787 502 aa6.71□□□□□ -1.34
CCNT1-202ENST00000417344 CDH3P22223 829 aa6.71□□□□□ -1.34
CCNT1-202ENST00000417344 PMLP29590 882 aa6.71□□□□□ -1.34
CCNT1-202ENST00000417344 PIK3CAP42336 1068 aa6.71□□□□□ -1.34
CCNT1-202ENST00000417344 KCNJ1P48048 391 aa6.71□□□□□ -1.34
CCNT1-202ENST00000417344 HIRAP54198 1017 aaPredicted RBP6.71□□□□□ -1.34
CCNT1-202ENST00000417344 NUP107P57740 925 aa6.71□□□□□ -1.34
CCNT1-202ENST00000417344 TROAPQ12815 778 aa6.71□□□□□ -1.34
CCNT1-202ENST00000417344 FOXC1Q12948 553 aa6.71□□□□□ -1.34
CCNT1-202ENST00000417344 IFIT5Q13325 482 aaKnown RBP6.71□□□□□ -1.34
CCNT1-202ENST00000417344 APOFQ13790 326 aa6.71□□□□□ -1.34
CCNT1-202ENST00000417344 ACAP1Q15027 740 aa6.71□□□□□ -1.34
CCNT1-202ENST00000417344 NONOQ15233 471 aaKnown RBP eCLIP6.71□□□□□ -1.34
CCNT1-202ENST00000417344 LRRC41Q15345 812 aa6.71□□□□□ -1.34
CCNT1-202ENST00000417344 TRIP10Q15642 601 aa6.71□□□□□ -1.34
CCNT1-202ENST00000417344 SEPT7Q16181 437 aaKnown RBP6.71□□□□□ -1.34
CCNT1-202ENST00000417344 MAPK6Q16659 721 aa6.71□□□□□ -1.34
CCNT1-202ENST00000417344 PFKFB3Q16875 520 aaPredicted RBP6.71□□□□□ -1.34
CCNT1-202ENST00000417344 USP41Q3LFD5 358 aa6.71□□□□□ -1.34
CCNT1-202ENST00000417344 ANKDD1AQ495B1 522 aa6.71□□□□□ -1.34
CCNT1-202ENST00000417344 IFIT1BQ5T764 474 aaKnown RBP6.71□□□□□ -1.34
CCNT1-202ENST00000417344 SEL1L2Q5TEA6 688 aa6.71□□□□□ -1.34
CCNT1-202ENST00000417344 LVRNQ6Q4G3 990 aa6.71□□□□□ -1.34
CCNT1-202ENST00000417344 CLEC4GQ6UXB4 293 aa6.71□□□□□ -1.34
CCNT1-202ENST00000417344 KYAT3Q6YP21 454 aaKnown RBP6.71□□□□□ -1.34
CCNT1-202ENST00000417344 RNF111Q6ZNA4 994 aa6.71□□□□□ -1.34
CCNT1-202ENST00000417344 GET4Q7L5D6 327 aaPredicted RBP6.71□□□□□ -1.34
CCNT1-202ENST00000417344 DYMQ7RTS9 669 aa6.71□□□□□ -1.34
CCNT1-202ENST00000417344 PRUNE1Q86TP1 453 aa6.71□□□□□ -1.34
CCNT1-202ENST00000417344 WDR75Q8IWA0 830 aaKnown RBP6.71□□□□□ -1.34
CCNT1-202ENST00000417344 AHI1Q8N157 1196 aa6.71□□□□□ -1.34
CCNT1-202ENST00000417344 C4orf33Q8N1A6 199 aa6.71□□□□□ -1.34
CCNT1-202ENST00000417344 ENAHQ8N8S7 591 aaPredicted RBP6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms