RNA–Protein interactions for RNA: ENST00000417285.6

VEGFA-208, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,081 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-208ENST00000417285 TSPY1Q01534 308 aa27.27■■□□□ 1.96
VEGFA-208ENST00000417285 TAF12Q16514 161 aa27.27■■□□□ 1.96
VEGFA-208ENST00000417285 NFE2Q16621 373 aaPredicted RBP27.27■■□□□ 1.96
VEGFA-208ENST00000417285 ZNF528Q3MIS6 628 aa27.27■■□□□ 1.96
VEGFA-208ENST00000417285 GAREM2Q75VX8 874 aa27.27■■□□□ 1.96
VEGFA-208ENST00000417285 LRRTM3Q86VH5 581 aa27.27■■□□□ 1.96
VEGFA-208ENST00000417285 YAF2Q8IY57 180 aa27.27■■□□□ 1.96
VEGFA-208ENST00000417285 TMEM86AQ8N2M4 240 aa27.27■■□□□ 1.96
VEGFA-208ENST00000417285 TTC9BQ8N6N2 239 aa27.27■■□□□ 1.96
VEGFA-208ENST00000417285 KIAA1586Q9HCI6 787 aa27.27■■□□□ 1.96
VEGFA-208ENST00000417285 GDAP2Q9NXN4 497 aa27.27■■□□□ 1.96
VEGFA-208ENST00000417285 ZMYM5Q9UJ78 669 aa27.27■■□□□ 1.96
VEGFA-208ENST00000417285 PCDHA7Q9UN72 937 aa27.27■■□□□ 1.96
VEGFA-208ENST00000417285 SPTBN4Q9H254 2564 aa27.26■■□□□ 1.95
VEGFA-208ENST00000417285 EP300Q09472 2414 aaPredicted RBP27.26■■□□□ 1.95
VEGFA-208ENST00000417285 ZNF233A6NK53 670 aa27.26■■□□□ 1.95
VEGFA-208ENST00000417285 POLR2DO15514 142 aaKnown RBP27.26■■□□□ 1.95
VEGFA-208ENST00000417285 SOAT2O75908 522 aa27.26■■□□□ 1.95
VEGFA-208ENST00000417285 LMNAP02545 664 aaKnown RBP27.26■■□□□ 1.95
VEGFA-208ENST00000417285 HAPLN1P10915 354 aaPredicted RBP27.26■■□□□ 1.95
VEGFA-208ENST00000417285 GABRR2P28476 465 aa27.26■■□□□ 1.95
VEGFA-208ENST00000417285 WNT7BP56706 349 aa27.26■■□□□ 1.95
VEGFA-208ENST00000417285 ARID3BQ8IVW6 561 aaPredicted RBP27.26■■□□□ 1.95
VEGFA-208ENST00000417285 SPATA18Q8TC71 538 aa27.26■■□□□ 1.95
VEGFA-208ENST00000417285 NOC3LQ8WTT2 800 aaKnown RBP27.26■■□□□ 1.95
VEGFA-208ENST00000417285 C7orf25Q9BPX7 421 aa27.26■■□□□ 1.95
VEGFA-208ENST00000417285 ACBD6Q9BR61 282 aa27.26■■□□□ 1.95
VEGFA-208ENST00000417285 PDE11AQ9HCR9 933 aa27.26■■□□□ 1.95
VEGFA-208ENST00000417285 OBP2AQ9NY56 170 aa27.26■■□□□ 1.95
VEGFA-208ENST00000417285 PCDHB5Q9Y5E4 795 aa27.26■■□□□ 1.95
VEGFA-208ENST00000417285 CACNA1IQ9P0X4 2223 aa27.25■■□□□ 1.95
VEGFA-208ENST00000417285 SCN1AP35498 2009 aa27.25■■□□□ 1.95
VEGFA-208ENST00000417285 EIF3DO15371 548 aaKnown RBP eCLIP27.25■■□□□ 1.95
VEGFA-208ENST00000417285 TARSP26639 723 aaKnown RBP27.25■■□□□ 1.95
VEGFA-208ENST00000417285 CDC25CP30307 473 aa27.25■■□□□ 1.95
VEGFA-208ENST00000417285 DNM1Q05193 864 aaKnown RBP27.25■■□□□ 1.95
VEGFA-208ENST00000417285 C1orf228Q6PIY5 440 aa27.25■■□□□ 1.95
VEGFA-208ENST00000417285 ADSSL1Q8N142 457 aa27.25■■□□□ 1.95
VEGFA-208ENST00000417285 PDCL2Q8N4E4 241 aa27.25■■□□□ 1.95
VEGFA-208ENST00000417285 ZNF507Q8TCN5 953 aa27.25■■□□□ 1.95
VEGFA-208ENST00000417285 ANK1P16157 1881 aa27.25■■□□□ 1.95
VEGFA-208ENST00000417285 DPYSL4O14531 572 aa27.24■■□□□ 1.95
VEGFA-208ENST00000417285 CHADO15335 359 aa27.24■■□□□ 1.95
VEGFA-208ENST00000417285 TMEM191BP0C7N4 346 aa27.24■■□□□ 1.95
VEGFA-208ENST00000417285 SNRPFP62306 86 aaKnown RBP27.24■■□□□ 1.95
VEGFA-208ENST00000417285 MYL7Q01449 175 aa27.24■■□□□ 1.95
VEGFA-208ENST00000417285 FCHO2Q0JRZ9 810 aa27.24■■□□□ 1.95
VEGFA-208ENST00000417285 GPR158Q5T848 1215 aa27.24■■□□□ 1.95
VEGFA-208ENST00000417285 RESP18Q5W5W9 173 aa27.24■■□□□ 1.95
VEGFA-208ENST00000417285 MAML2Q8IZL2 1156 aaPredicted RBP27.24■■□□□ 1.95
VEGFA-208ENST00000417285 CXorf38Q8TB03 319 aa27.24■■□□□ 1.95
VEGFA-208ENST00000417285 MSANTD3Q96H12 275 aa27.24■■□□□ 1.95
VEGFA-208ENST00000417285 ANKRD36BP1Q96IX9 119 aa27.24■■□□□ 1.95
VEGFA-208ENST00000417285 GCNAQ96QF7 691 aa27.24■■□□□ 1.95
VEGFA-208ENST00000417285 LPIN3Q9BQK8 851 aa27.24■■□□□ 1.95
VEGFA-208ENST00000417285 TASP1Q9H6P5 420 aa27.24■■□□□ 1.95
VEGFA-208ENST00000417285 R4GN57 208 aa27.24■■□□□ 1.95
VEGFA-208ENST00000417285 SHISA7A6NL88 538 aa27.23■■□□□ 1.95
VEGFA-208ENST00000417285 KRT19P08727 400 aa27.23■■□□□ 1.95
VEGFA-208ENST00000417285 ATF6P18850 670 aa27.23■■□□□ 1.95
VEGFA-208ENST00000417285 LHX1P48742 406 aa27.23■■□□□ 1.95
VEGFA-208ENST00000417285 MYO1EQ12965 1108 aa27.23■■□□□ 1.95
VEGFA-208ENST00000417285 FZD5Q13467 585 aa27.23■■□□□ 1.95
VEGFA-208ENST00000417285 DUOXA2Q1HG44 320 aa27.23■■□□□ 1.95
VEGFA-208ENST00000417285 MAMSTRQ6ZN01 415 aa27.23■■□□□ 1.95
VEGFA-208ENST00000417285 EPM2AIP1Q7L775 607 aaPredicted RBP27.23■■□□□ 1.95
VEGFA-208ENST00000417285 TOP6BLQ8N6T0 577 aa27.23■■□□□ 1.95
VEGFA-208ENST00000417285 CSGALNACT1Q8TDX6 532 aa27.23■■□□□ 1.95
VEGFA-208ENST00000417285 FAM3CQ92520 227 aa27.23■■□□□ 1.95
VEGFA-208ENST00000417285 HPS3Q969F9 1004 aa27.23■■□□□ 1.95
VEGFA-208ENST00000417285 INTS13Q9NVM9 706 aa27.23■■□□□ 1.95
VEGFA-208ENST00000417285 ABI2Q9NYB9 513 aaPredicted RBP27.23■■□□□ 1.95
VEGFA-208ENST00000417285 RCOR1Q9UKL0 485 aa27.23■■□□□ 1.95
VEGFA-208ENST00000417285 L1RE1Q9UN81 338 aa27.23■■□□□ 1.95
VEGFA-208ENST00000417285 PIAS3Q9Y6X2 628 aa27.23■■□□□ 1.95
VEGFA-208ENST00000417285 TNNC2P02585 160 aa27.22■■□□□ 1.95
VEGFA-208ENST00000417285 BFSP1Q12934 665 aa27.22■■□□□ 1.95
VEGFA-208ENST00000417285 FAM26FQ5R3K3 315 aa27.22■■□□□ 1.95
VEGFA-208ENST00000417285 STXBP5Q5T5C0 1151 aa27.22■■□□□ 1.95
VEGFA-208ENST00000417285 UNC13DQ70J99 1090 aa27.22■■□□□ 1.95
VEGFA-208ENST00000417285 DPH6Q7L8W6 267 aa27.22■■□□□ 1.95
VEGFA-208ENST00000417285 GLIS3Q8NEA6 775 aa27.22■■□□□ 1.95
VEGFA-208ENST00000417285 GIPC2Q8TF65 315 aa27.22■■□□□ 1.95
VEGFA-208ENST00000417285 LEO1Q8WVC0 666 aaPredicted RBP27.22■■□□□ 1.95
VEGFA-208ENST00000417285 IER2Q9BTL4 223 aa27.22■■□□□ 1.95
VEGFA-208ENST00000417285 MKNK1Q9BUB5 465 aa27.22■■□□□ 1.95
VEGFA-208ENST00000417285 C8orf33Q9H7E9 229 aaPredicted RBP27.22■■□□□ 1.95
VEGFA-208ENST00000417285 ABCB6Q9NP58 842 aa27.22■■□□□ 1.95
VEGFA-208ENST00000417285 DDX43Q9NXZ2 648 aaKnown RBP27.22■■□□□ 1.95
VEGFA-208ENST00000417285 HSPBP1Q9NZL4 362 aa27.22■■□□□ 1.95
VEGFA-208ENST00000417285 SNX9Q9Y5X1 595 aa27.22■■□□□ 1.95
VEGFA-208ENST00000417285 FRYLO94915 3013 aa27.22■■□□□ 1.95
VEGFA-208ENST00000417285 SOBPA7XYQ1 873 aa27.21■■□□□ 1.95
VEGFA-208ENST00000417285 ARNTLO00327 626 aa27.21■■□□□ 1.95
VEGFA-208ENST00000417285 HOXD13P35453 343 aa27.21■■□□□ 1.95
VEGFA-208ENST00000417285 CSTF1Q05048 431 aaKnown RBP27.21■■□□□ 1.95
VEGFA-208ENST00000417285 ARHGAP29Q52LW3 1261 aa27.21■■□□□ 1.95
VEGFA-208ENST00000417285 ZNF687Q8N1G0 1237 aa27.21■■□□□ 1.95
VEGFA-208ENST00000417285 RSPRY1Q96DX4 576 aa27.21■■□□□ 1.95
VEGFA-208ENST00000417285 MTMR12Q9C0I1 747 aa27.21■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms