RNA–Protein interactions for RNA: ENST00000416728.3

PAF1-202, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene PAF1, Length 1,383 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-202ENST00000416728 CLIC6Q96NY7 704 aa15.57■□□□□ 0.08
PAF1-202ENST00000416728 LRRC3BQ96PB8 259 aa15.57■□□□□ 0.08
PAF1-202ENST00000416728 ACCSQ96QU6 501 aa15.57■□□□□ 0.08
PAF1-202ENST00000416728 FAM213AQ9BRX8 229 aa15.57■□□□□ 0.08
PAF1-202ENST00000416728 STRA6Q9BX79 667 aa15.57■□□□□ 0.08
PAF1-202ENST00000416728 IL21Q9HBE4 155 aa15.57■□□□□ 0.08
PAF1-202ENST00000416728 GTSE1Q9NYZ3 720 aa15.57■□□□□ 0.08
PAF1-202ENST00000416728 TBC1D7Q9P0N9 293 aa15.57■□□□□ 0.08
PAF1-202ENST00000416728 ZNF292O60281 2723 aa15.57■□□□□ 0.08
PAF1-202ENST00000416728 MYBPHLA2RUH7 354 aa15.56■□□□□ 0.08
PAF1-202ENST00000416728 GCNT3O95395 438 aa15.56■□□□□ 0.08
PAF1-202ENST00000416728 HAPLN1P10915 354 aaPredicted RBP15.56■□□□□ 0.08
PAF1-202ENST00000416728 WEE1P30291 646 aa15.56■□□□□ 0.08
PAF1-202ENST00000416728 TFAMQ00059 246 aaKnown RBP15.56■□□□□ 0.08
PAF1-202ENST00000416728 PLCB2Q00722 1185 aa15.56■□□□□ 0.08
PAF1-202ENST00000416728 TSPY1Q01534 308 aa15.56■□□□□ 0.08
PAF1-202ENST00000416728 SATB1Q01826 763 aa15.56■□□□□ 0.08
PAF1-202ENST00000416728 KCNA1Q09470 495 aa15.56■□□□□ 0.08
PAF1-202ENST00000416728 RESTQ13127 1097 aa15.56■□□□□ 0.08
PAF1-202ENST00000416728 GAS6Q14393 721 aa15.56■□□□□ 0.08
PAF1-202ENST00000416728 RSPO4Q2I0M5 234 aaPredicted RBP15.56■□□□□ 0.08
PAF1-202ENST00000416728 DGKKQ5KSL6 1271 aa15.56■□□□□ 0.08
PAF1-202ENST00000416728 L1TD1Q5T7N2 865 aaKnown RBP15.56■□□□□ 0.08
PAF1-202ENST00000416728 LRRTM3Q86VH5 581 aa15.56■□□□□ 0.08
PAF1-202ENST00000416728 TTC8Q8TAM2 541 aa15.56■□□□□ 0.08
PAF1-202ENST00000416728 DNAJC19Q96DA6 116 aa15.56■□□□□ 0.08
PAF1-202ENST00000416728 RBM12Q9NTZ6 932 aaKnown RBP15.56■□□□□ 0.08
PAF1-202ENST00000416728 THG1LQ9NWX6 298 aaKnown RBP15.56■□□□□ 0.08
PAF1-202ENST00000416728 ZMYM5Q9UJ78 669 aa15.56■□□□□ 0.08
PAF1-202ENST00000416728 PCDHB5Q9Y5E4 795 aa15.56■□□□□ 0.08
PAF1-202ENST00000416728 PCDHB13Q9Y5F0 798 aa15.56■□□□□ 0.08
PAF1-202ENST00000416728 TICRRQ7Z2Z1 1910 aa15.55■□□□□ 0.08
PAF1-202ENST00000416728 MED19A0JLT2 244 aaPredicted RBP15.55■□□□□ 0.08
PAF1-202ENST00000416728 LDHAP00338 332 aaKnown RBP15.55■□□□□ 0.08
PAF1-202ENST00000416728 IDEP14735 1019 aa15.55■□□□□ 0.08
PAF1-202ENST00000416728 SDHBP21912 280 aa15.55■□□□□ 0.08
PAF1-202ENST00000416728 POLR2BP30876 1174 aaKnown RBP15.55■□□□□ 0.08
PAF1-202ENST00000416728 STAT6P42226 847 aa15.55■□□□□ 0.08
PAF1-202ENST00000416728 LMNB2Q03252 620 aa15.55■□□□□ 0.08
PAF1-202ENST00000416728 CEBPZQ03701 1054 aaKnown RBP15.55■□□□□ 0.08
PAF1-202ENST00000416728 ALCAMQ13740 583 aa15.55■□□□□ 0.08
PAF1-202ENST00000416728 FAM173BQ6P4H8 233 aa15.55■□□□□ 0.08
PAF1-202ENST00000416728 TXNDC11Q6PKC3 985 aa15.55■□□□□ 0.08
PAF1-202ENST00000416728 CCDC73Q6ZRK6 1079 aa15.55■□□□□ 0.08
PAF1-202ENST00000416728 BRSK2Q8IWQ3 736 aa15.55■□□□□ 0.08
PAF1-202ENST00000416728 SYCP3Q8IZU3 236 aa15.55■□□□□ 0.08
PAF1-202ENST00000416728 CELF5Q8N6W0 485 aaKnown RBP15.55■□□□□ 0.08
PAF1-202ENST00000416728 SAAL1Q96ER3 474 aa15.55■□□□□ 0.08
PAF1-202ENST00000416728 SLC46A2Q9BY10 475 aa15.55■□□□□ 0.08
PAF1-202ENST00000416728 OLFML3Q9NRN5 406 aa15.55■□□□□ 0.08
PAF1-202ENST00000416728 RBAKQ9NYW8 714 aaPredicted RBP15.55■□□□□ 0.08
PAF1-202ENST00000416728 USP18Q9UMW8 372 aa15.55■□□□□ 0.08
PAF1-202ENST00000416728 AGAP1Q9UPQ3 857 aa15.55■□□□□ 0.08
PAF1-202ENST00000416728 ITGB3P05106 788 aa15.54■□□□□ 0.08
PAF1-202ENST00000416728 SYT1P21579 422 aa15.54■□□□□ 0.08
PAF1-202ENST00000416728 GARTP22102 1010 aa15.54■□□□□ 0.08
PAF1-202ENST00000416728 WNT7BP56706 349 aa15.54■□□□□ 0.08
PAF1-202ENST00000416728 TNK2Q07912 1038 aa15.54■□□□□ 0.08
PAF1-202ENST00000416728 PON2Q15165 354 aa15.54■□□□□ 0.08
PAF1-202ENST00000416728 LPAL2Q16609 132 aa15.54■□□□□ 0.08
PAF1-202ENST00000416728 NFE2Q16621 373 aaPredicted RBP15.54■□□□□ 0.08
PAF1-202ENST00000416728 PRR23BQ6ZRT6 265 aa15.54■□□□□ 0.08
PAF1-202ENST00000416728 Q6ZS52 159 aa15.54■□□□□ 0.08
PAF1-202ENST00000416728 CMTM8Q8IZV2 173 aa15.54■□□□□ 0.08
PAF1-202ENST00000416728 PDCL2Q8N4E4 241 aa15.54■□□□□ 0.08
PAF1-202ENST00000416728 CACTINQ8WUQ7 758 aaKnown RBP15.54■□□□□ 0.08
PAF1-202ENST00000416728 SMG9Q9H0W8 520 aaKnown RBP15.54■□□□□ 0.08
PAF1-202ENST00000416728 CACNA1AO00555 2505 aa15.54■□□□□ 0.08
PAF1-202ENST00000416728 TSC2P49815 1807 aa15.53■□□□□ 0.08
PAF1-202ENST00000416728 PRR5-ARHGAP8B1AHC4 643 aa15.53■□□□□ 0.08
PAF1-202ENST00000416728 HUS1O60921 280 aa15.53■□□□□ 0.08
PAF1-202ENST00000416728 PRPF40AO75400 957 aaKnown RBP15.53■□□□□ 0.08
PAF1-202ENST00000416728 PAPSS2O95340 614 aaPredicted RBP15.53■□□□□ 0.08
PAF1-202ENST00000416728 DDX6P26196 483 aaKnown RBP eCLIP15.53■□□□□ 0.08
PAF1-202ENST00000416728 AVPR1AP37288 418 aa15.53■□□□□ 0.08
PAF1-202ENST00000416728 CASP5P51878 434 aa15.53■□□□□ 0.08
PAF1-202ENST00000416728 NLRP12P59046 1061 aa15.53■□□□□ 0.08
PAF1-202ENST00000416728 ARHGAP8P85298 464 aa15.53■□□□□ 0.08
PAF1-202ENST00000416728 BFSP1Q12934 665 aa15.53■□□□□ 0.08
PAF1-202ENST00000416728 ITPRIPL2Q3MIP1 535 aa15.53■□□□□ 0.08
PAF1-202ENST00000416728 WDR44Q5JSH3 913 aa15.53■□□□□ 0.08
PAF1-202ENST00000416728 LAIR1Q6GTX8 287 aa15.53■□□□□ 0.08
PAF1-202ENST00000416728 LRRC52Q8N7C0 313 aa15.53■□□□□ 0.08
PAF1-202ENST00000416728 C1orf127Q8N9H9 656 aa15.53■□□□□ 0.08
PAF1-202ENST00000416728 ZSWIM2Q8NEG5 633 aa15.53■□□□□ 0.08
PAF1-202ENST00000416728 NOC3LQ8WTT2 800 aaKnown RBP15.53■□□□□ 0.08
PAF1-202ENST00000416728 PI4K2AQ9BTU6 479 aa15.53■□□□□ 0.08
PAF1-202ENST00000416728 TMLHEQ9NVH6 421 aa15.53■□□□□ 0.08
PAF1-202ENST00000416728 ITGA11Q9UKX5 1188 aa15.53■□□□□ 0.08
PAF1-202ENST00000416728 CDV3Q9UKY7 258 aaKnown RBP15.53■□□□□ 0.08
PAF1-202ENST00000416728 L1RE1Q9UN81 338 aa15.53■□□□□ 0.08
PAF1-202ENST00000416728 CEP250Q9BV73 2442 aa15.52■□□□□ 0.08
PAF1-202ENST00000416728 GOLGA8IPA6NC78 632 aa15.52■□□□□ 0.08
PAF1-202ENST00000416728 GOLGA8JA6NMD2 632 aa15.52■□□□□ 0.08
PAF1-202ENST00000416728 CHURC1-FNTBB4DL54 471 aa15.52■□□□□ 0.08
PAF1-202ENST00000416728 EXTL3O43909 919 aa15.52■□□□□ 0.08
PAF1-202ENST00000416728 CSH1P0DML2 217 aa15.52■□□□□ 0.08
PAF1-202ENST00000416728 CSH2P0DML3 217 aa15.52■□□□□ 0.08
PAF1-202ENST00000416728 HMGA1P17096 107 aaKnown RBP15.52■□□□□ 0.08
PAF1-202ENST00000416728 FNTBP49356 437 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms