RNA–Protein interactions for RNA: ENST00000416538.5

UBXN4-203, Transcript of UBX domain protein 4, humanhuman

TSL 5

Gene UBXN4, Length 1,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-203ENST00000416538 IRF2BPLQ9H1B7 796 aa16.28■□□□□ 0.2
UBXN4-203ENST00000416538 TMEM206Q9H813 350 aa16.28■□□□□ 0.2
UBXN4-203ENST00000416538 TRPV4Q9HBA0 871 aa16.28■□□□□ 0.2
UBXN4-203ENST00000416538 ZFP14Q9HCL3 533 aa16.28■□□□□ 0.2
UBXN4-203ENST00000416538 LTB4R2Q9NPC1 389 aa16.28■□□□□ 0.2
UBXN4-203ENST00000416538 HSPBP1Q9NZL4 362 aa16.28■□□□□ 0.2
UBXN4-203ENST00000416538 DSEQ9UL01 958 aa16.28■□□□□ 0.2
UBXN4-203ENST00000416538 AGAP1Q9UPQ3 857 aa16.28■□□□□ 0.2
UBXN4-203ENST00000416538 ZDHHC9Q9Y397 364 aa16.28■□□□□ 0.2
UBXN4-203ENST00000416538 MYO16Q9Y6X6 1858 aa16.28■□□□□ 0.2
UBXN4-203ENST00000416538 EP300Q09472 2414 aaPredicted RBP16.28■□□□□ 0.2
UBXN4-203ENST00000416538 KIAA1549LQ6ZVL6 1849 aa16.27■□□□□ 0.2
UBXN4-203ENST00000416538 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.27■□□□□ 0.2
UBXN4-203ENST00000416538 ARNTLO00327 626 aa16.27■□□□□ 0.2
UBXN4-203ENST00000416538 EIF3DO15371 548 aaKnown RBP eCLIP16.27■□□□□ 0.2
UBXN4-203ENST00000416538 PRAMEF12O95522 483 aa16.27■□□□□ 0.2
UBXN4-203ENST00000416538 PAX3P23760 479 aa16.27■□□□□ 0.2
UBXN4-203ENST00000416538 ACAT1P24752 427 aaKnown RBP16.27■□□□□ 0.2
UBXN4-203ENST00000416538 EPHB3P54753 998 aa16.27■□□□□ 0.2
UBXN4-203ENST00000416538 CYP4F8P98187 520 aa16.27■□□□□ 0.2
UBXN4-203ENST00000416538 PFKPQ01813 784 aa16.27■□□□□ 0.2
UBXN4-203ENST00000416538 PRKCQQ04759 706 aa16.27■□□□□ 0.2
UBXN4-203ENST00000416538 BFSP1Q12934 665 aa16.27■□□□□ 0.2
UBXN4-203ENST00000416538 PLD1Q13393 1074 aa16.27■□□□□ 0.2
UBXN4-203ENST00000416538 FZD5Q13467 585 aa16.27■□□□□ 0.2
UBXN4-203ENST00000416538 CUL4BQ13620 913 aa16.27■□□□□ 0.2
UBXN4-203ENST00000416538 UBXN2BQ14CS0 331 aa16.27■□□□□ 0.2
UBXN4-203ENST00000416538 UNC13DQ70J99 1090 aa16.27■□□□□ 0.2
UBXN4-203ENST00000416538 ZNF687Q8N1G0 1237 aa16.27■□□□□ 0.2
UBXN4-203ENST00000416538 IQUBQ8NA54 791 aa16.27■□□□□ 0.2
UBXN4-203ENST00000416538 LRRC3BQ96PB8 259 aa16.27■□□□□ 0.2
UBXN4-203ENST00000416538 INTS13Q9NVM9 706 aa16.27■□□□□ 0.2
UBXN4-203ENST00000416538 ABI2Q9NYB9 513 aaPredicted RBP16.27■□□□□ 0.2
UBXN4-203ENST00000416538 GTF3C3Q9Y5Q9 886 aa16.27■□□□□ 0.2
UBXN4-203ENST00000416538 SPTBN4Q9H254 2564 aa16.27■□□□□ 0.19
UBXN4-203ENST00000416538 HEPACAM2A8MVW5 462 aa16.26■□□□□ 0.19
UBXN4-203ENST00000416538 TULP1O00294 542 aaPredicted RBP16.26■□□□□ 0.19
UBXN4-203ENST00000416538 ACTN4O43707 911 aaKnown RBP16.26■□□□□ 0.19
UBXN4-203ENST00000416538 LDHAP00338 332 aaKnown RBP16.26■□□□□ 0.19
UBXN4-203ENST00000416538 HSP90AA1P07900 732 aaKnown RBP16.26■□□□□ 0.19
UBXN4-203ENST00000416538 HAPLN1P10915 354 aaPredicted RBP16.26■□□□□ 0.19
UBXN4-203ENST00000416538 GABRR2P28476 465 aa16.26■□□□□ 0.19
UBXN4-203ENST00000416538 ALDH1A3P47895 512 aa16.26■□□□□ 0.19
UBXN4-203ENST00000416538 ME1P48163 572 aa16.26■□□□□ 0.19
UBXN4-203ENST00000416538 MGAT5BQ3V5L5 792 aa16.26■□□□□ 0.19
UBXN4-203ENST00000416538 TMEM150AQ86TG1 271 aa16.26■□□□□ 0.19
UBXN4-203ENST00000416538 NELFCDQ8IXH7 590 aa16.26■□□□□ 0.19
UBXN4-203ENST00000416538 LRRC52Q8N7C0 313 aa16.26■□□□□ 0.19
UBXN4-203ENST00000416538 ZNF507Q8TCN5 953 aa16.26■□□□□ 0.19
UBXN4-203ENST00000416538 GIPC2Q8TF65 315 aa16.26■□□□□ 0.19
UBXN4-203ENST00000416538 DNASE1L2Q92874 299 aa16.26■□□□□ 0.19
UBXN4-203ENST00000416538 AGPAT3Q9NRZ7 376 aa16.26■□□□□ 0.19
UBXN4-203ENST00000416538 HSFX1Q9UBD0 423 aa16.26■□□□□ 0.19
UBXN4-203ENST00000416538 ITGA11Q9UKX5 1188 aa16.26■□□□□ 0.19
UBXN4-203ENST00000416538 NME7Q9Y5B8 376 aa16.26■□□□□ 0.19
UBXN4-203ENST00000416538 ATG2BQ96BY7 2078 aa16.26■□□□□ 0.19
UBXN4-203ENST00000416538 KLRC4O43908 158 aa16.25■□□□□ 0.19
UBXN4-203ENST00000416538 HMGA1P17096 107 aaKnown RBP16.25■□□□□ 0.19
UBXN4-203ENST00000416538 PSMC3P17980 439 aa16.25■□□□□ 0.19
UBXN4-203ENST00000416538 GDI1P31150 447 aa16.25■□□□□ 0.19
UBXN4-203ENST00000416538 PNPLA4P41247 253 aa16.25■□□□□ 0.19
UBXN4-203ENST00000416538 AFMP43652 599 aa16.25■□□□□ 0.19
UBXN4-203ENST00000416538 WDR44Q5JSH3 913 aa16.25■□□□□ 0.19
UBXN4-203ENST00000416538 SDHAF4Q5VUM1 108 aa16.25■□□□□ 0.19
UBXN4-203ENST00000416538 METTL23Q86XA0 190 aa16.25■□□□□ 0.19
UBXN4-203ENST00000416538 CSGALNACT2Q8N6G5 542 aa16.25■□□□□ 0.19
UBXN4-203ENST00000416538 KBTBD7Q8WVZ9 684 aa16.25■□□□□ 0.19
UBXN4-203ENST00000416538 SHDQ96IW2 340 aa16.25■□□□□ 0.19
UBXN4-203ENST00000416538 SLITRK6Q9H5Y7 841 aa16.25■□□□□ 0.19
UBXN4-203ENST00000416538 BRD9Q9H8M2 597 aa16.25■□□□□ 0.19
UBXN4-203ENST00000416538 GDAP2Q9NXN4 497 aa16.25■□□□□ 0.19
UBXN4-203ENST00000416538 SERTAD1Q9UHV2 236 aa16.25■□□□□ 0.19
UBXN4-203ENST00000416538 RCOR1Q9UKL0 485 aa16.25■□□□□ 0.19
UBXN4-203ENST00000416538 SNX9Q9Y5X1 595 aa16.25■□□□□ 0.19
UBXN4-203ENST00000416538 R4GN57 208 aa16.25■□□□□ 0.19
UBXN4-203ENST00000416538 UBE4BO95155 1302 aa16.24■□□□□ 0.19
UBXN4-203ENST00000416538 FAM170BA6NMN3 283 aa16.24■□□□□ 0.19
UBXN4-203ENST00000416538 CLIC2O15247 247 aa16.24■□□□□ 0.19
UBXN4-203ENST00000416538 TADA3O75528 432 aa16.24■□□□□ 0.19
UBXN4-203ENST00000416538 KRT19P08727 400 aa16.24■□□□□ 0.19
UBXN4-203ENST00000416538 TMEM191BP0C7N4 346 aa16.24■□□□□ 0.19
UBXN4-203ENST00000416538 BMT2Q1RMZ1 405 aa16.24■□□□□ 0.19
UBXN4-203ENST00000416538 SOWAHAQ2M3V2 549 aa16.24■□□□□ 0.19
UBXN4-203ENST00000416538 INTS6LQ5JSJ4 861 aaKnown RBP16.24■□□□□ 0.19
UBXN4-203ENST00000416538 GPR158Q5T848 1215 aa16.24■□□□□ 0.19
UBXN4-203ENST00000416538 LIMS2Q7Z4I7 341 aa16.24■□□□□ 0.19
UBXN4-203ENST00000416538 ARID3BQ8IVW6 561 aaPredicted RBP16.24■□□□□ 0.19
UBXN4-203ENST00000416538 C1orf210Q8IVY1 113 aa16.24■□□□□ 0.19
UBXN4-203ENST00000416538 ADGRF2Q8IZF7 708 aa16.24■□□□□ 0.19
UBXN4-203ENST00000416538 KIAA0895Q8NCT3 520 aa16.24■□□□□ 0.19
UBXN4-203ENST00000416538 RIN3Q8TB24 985 aa16.24■□□□□ 0.19
UBXN4-203ENST00000416538 SPPL2BQ8TCT7 592 aa16.24■□□□□ 0.19
UBXN4-203ENST00000416538 PLEKHO2Q8TD55 490 aa16.24■□□□□ 0.19
UBXN4-203ENST00000416538 DEPDC1BQ8WUY9 529 aa16.24■□□□□ 0.19
UBXN4-203ENST00000416538 PI4K2AQ9BTU6 479 aa16.24■□□□□ 0.19
UBXN4-203ENST00000416538 TRMT61BQ9BVS5 477 aaKnown RBP16.24■□□□□ 0.19
UBXN4-203ENST00000416538 SMG9Q9H0W8 520 aaKnown RBP16.24■□□□□ 0.19
UBXN4-203ENST00000416538 ATXN3LQ9H3M9 355 aa16.24■□□□□ 0.19
UBXN4-203ENST00000416538 MAGEF1Q9HAY2 307 aa16.24■□□□□ 0.19
UBXN4-203ENST00000416538 SLC39A2Q9NP94 309 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms