RNA–Protein interactions for RNA: ENST00000415993.5

HDAC10-203, Transcript of histone deacetylase 10, humanhuman

TSL 1 (best)

Gene HDAC10, Length 2,375 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC10-203ENST00000415993 CYP1B1Q16678 543 aa18.31■□□□□ 0.52
HDAC10-203ENST00000415993 RNF19AQ9NV58 838 aa18.31■□□□□ 0.52
HDAC10-203ENST00000415993 TJP2Q9UDY2 1190 aa18.31■□□□□ 0.52
HDAC10-203ENST00000415993 IP6K2Q9UHH9 426 aa18.31■□□□□ 0.52
HDAC10-203ENST00000415993 SMIM28A0A1B0GU29 152 aa18.3■□□□□ 0.52
HDAC10-203ENST00000415993 OAS2P29728 719 aaKnown RBP18.3■□□□□ 0.52
HDAC10-203ENST00000415993 AARSP49588 968 aaKnown RBP eCLIP18.3■□□□□ 0.52
HDAC10-203ENST00000415993 OGDHQ02218 1023 aa18.3■□□□□ 0.52
HDAC10-203ENST00000415993 NOGQ13253 232 aa18.3■□□□□ 0.52
HDAC10-203ENST00000415993 NNTQ13423 1086 aa18.3■□□□□ 0.52
HDAC10-203ENST00000415993 CUL1Q13616 776 aa18.3■□□□□ 0.52
HDAC10-203ENST00000415993 CNGA2Q16280 664 aa18.3■□□□□ 0.52
HDAC10-203ENST00000415993 CYP4A22Q5TCH4 519 aa18.3■□□□□ 0.52
HDAC10-203ENST00000415993 GDF6Q6KF10 455 aaPredicted RBP18.3■□□□□ 0.52
HDAC10-203ENST00000415993 FAM228AQ86W67 206 aa18.3■□□□□ 0.52
HDAC10-203ENST00000415993 LRRC52Q8N7C0 313 aa18.3■□□□□ 0.52
HDAC10-203ENST00000415993 SMG8Q8ND04 991 aaKnown RBP18.3■□□□□ 0.52
HDAC10-203ENST00000415993 WNT8BQ93098 351 aa18.3■□□□□ 0.52
HDAC10-203ENST00000415993 ZBTB9Q96C00 473 aa18.3■□□□□ 0.52
HDAC10-203ENST00000415993 C18orf8Q96DM3 657 aa18.3■□□□□ 0.52
HDAC10-203ENST00000415993 APOL6Q9BWW8 343 aa18.3■□□□□ 0.52
HDAC10-203ENST00000415993 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.3■□□□□ 0.52
HDAC10-203ENST00000415993 FSCN2O14926 492 aa18.3■□□□□ 0.52
HDAC10-203ENST00000415993 PSTPIP1O43586 416 aa18.3■□□□□ 0.52
HDAC10-203ENST00000415993 AOC2O75106 756 aa18.3■□□□□ 0.52
HDAC10-203ENST00000415993 MICAL2O94851 1124 aa18.3■□□□□ 0.52
HDAC10-203ENST00000415993 RARAP10276 462 aa18.3■□□□□ 0.52
HDAC10-203ENST00000415993 RARBP10826 455 aa18.3■□□□□ 0.52
HDAC10-203ENST00000415993 VDRP11473 427 aa18.3■□□□□ 0.52
HDAC10-203ENST00000415993 C9orf57Q5W0N0 161 aa18.3■□□□□ 0.52
HDAC10-203ENST00000415993 DNAJC24Q6P3W2 148 aa18.3■□□□□ 0.52
HDAC10-203ENST00000415993 TTC27Q6P3X3 843 aa18.3■□□□□ 0.52
HDAC10-203ENST00000415993 DDX42Q86XP3 938 aaKnown RBP eCLIP18.3■□□□□ 0.52
HDAC10-203ENST00000415993 RHOT1Q8IXI2 618 aa18.3■□□□□ 0.52
HDAC10-203ENST00000415993 TTC39CQ8N584 583 aa18.3■□□□□ 0.52
HDAC10-203ENST00000415993 BEST2Q8NFU1 509 aa18.3■□□□□ 0.52
HDAC10-203ENST00000415993 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP18.3■□□□□ 0.52
HDAC10-203ENST00000415993 HEXIM2Q96MH2 286 aaKnown RBP18.3■□□□□ 0.52
HDAC10-203ENST00000415993 MCEEQ96PE7 176 aa18.3■□□□□ 0.52
HDAC10-203ENST00000415993 CPXM1Q96SM3 734 aa18.3■□□□□ 0.52
HDAC10-203ENST00000415993 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.3■□□□□ 0.52
HDAC10-203ENST00000415993 IPPQ9Y573 584 aa18.3■□□□□ 0.52
HDAC10-203ENST00000415993 SCN1AP35498 2009 aa18.29■□□□□ 0.52
HDAC10-203ENST00000415993 HMGCRP04035 888 aa18.29■□□□□ 0.52
HDAC10-203ENST00000415993 KCNE1P15382 129 aa18.29■□□□□ 0.52
HDAC10-203ENST00000415993 CHRNA3P32297 505 aa18.29■□□□□ 0.52
HDAC10-203ENST00000415993 GPD2P43304 727 aa18.29■□□□□ 0.52
HDAC10-203ENST00000415993 MRPS6P82932 125 aaKnown RBP18.29■□□□□ 0.52
HDAC10-203ENST00000415993 DR1Q01658 176 aa18.29■□□□□ 0.52
HDAC10-203ENST00000415993 HERPUD2Q9BSE4 406 aa18.29■□□□□ 0.52
HDAC10-203ENST00000415993 KLK14Q9P0G3 267 aa18.29■□□□□ 0.52
HDAC10-203ENST00000415993 PCYOX1Q9UHG3 505 aa18.29■□□□□ 0.52
HDAC10-203ENST00000415993 STRIP2Q9ULQ0 834 aa18.29■□□□□ 0.52
HDAC10-203ENST00000415993 UBQLN1Q9UMX0 589 aaKnown RBP18.29■□□□□ 0.52
HDAC10-203ENST00000415993 NME7Q9Y5B8 376 aa18.29■□□□□ 0.52
HDAC10-203ENST00000415993 SNX9Q9Y5X1 595 aa18.29■□□□□ 0.52
HDAC10-203ENST00000415993 PIRO00625 290 aa18.28■□□□□ 0.52
HDAC10-203ENST00000415993 PTGIRP43119 386 aa18.28■□□□□ 0.52
HDAC10-203ENST00000415993 GSCP56915 257 aaPredicted RBP18.28■□□□□ 0.52
HDAC10-203ENST00000415993 TAP1Q03518 808 aa18.28■□□□□ 0.52
HDAC10-203ENST00000415993 DHX34Q14147 1143 aaKnown RBP18.28■□□□□ 0.52
HDAC10-203ENST00000415993 TSEN2Q8NCE0 465 aaKnown RBP18.28■□□□□ 0.52
HDAC10-203ENST00000415993 ARRDC4Q8NCT1 418 aa18.28■□□□□ 0.52
HDAC10-203ENST00000415993 MRPL45Q9BRJ2 306 aaKnown RBP18.28■□□□□ 0.52
HDAC10-203ENST00000415993 PLVAPQ9BX97 442 aa18.28■□□□□ 0.52
HDAC10-203ENST00000415993 NT5C1AQ9BXI3 368 aa18.28■□□□□ 0.52
HDAC10-203ENST00000415993 SPC25Q9HBM1 224 aa18.28■□□□□ 0.52
HDAC10-203ENST00000415993 RNF186Q9NXI6 227 aa18.28■□□□□ 0.52
HDAC10-203ENST00000415993 AGPSO00116 658 aa18.28■□□□□ 0.52
HDAC10-203ENST00000415993 TCF4P15884 667 aa18.28■□□□□ 0.52
HDAC10-203ENST00000415993 CYP3A5P20815 502 aa18.28■□□□□ 0.52
HDAC10-203ENST00000415993 CCND3P30281 292 aaPredicted RBP18.28■□□□□ 0.52
HDAC10-203ENST00000415993 SERINC5Q86VE9 423 aa18.28■□□□□ 0.52
HDAC10-203ENST00000415993 KATNAL2Q8IYT4 538 aa18.28■□□□□ 0.52
HDAC10-203ENST00000415993 C12orf50Q8NA57 414 aaPredicted RBP18.28■□□□□ 0.52
HDAC10-203ENST00000415993 MAGOHBQ96A72 148 aaKnown RBP18.28■□□□□ 0.52
HDAC10-203ENST00000415993 TRIM51Q9BSJ1 452 aa18.28■□□□□ 0.52
HDAC10-203ENST00000415993 NEUROG2Q9H2A3 272 aa18.28■□□□□ 0.52
HDAC10-203ENST00000415993 KIAA1257Q9ULG3 409 aa18.28■□□□□ 0.52
HDAC10-203ENST00000415993 CDY2AQ9Y6F7 541 aa18.28■□□□□ 0.52
HDAC10-203ENST00000415993 F8VP50 259 aa18.27■□□□□ 0.52
HDAC10-203ENST00000415993 DAPK3O43293 454 aa18.27■□□□□ 0.52
HDAC10-203ENST00000415993 ERBB2P04626 1255 aa18.27■□□□□ 0.52
HDAC10-203ENST00000415993 GABRB2P47870 512 aa18.27■□□□□ 0.52
HDAC10-203ENST00000415993 GABPB1Q06547 395 aaPredicted RBP18.27■□□□□ 0.52
HDAC10-203ENST00000415993 LLGL1Q15334 1064 aa18.27■□□□□ 0.52
HDAC10-203ENST00000415993 SGO2Q562F6 1265 aa18.27■□□□□ 0.52
HDAC10-203ENST00000415993 CCSAPQ6IQ19 270 aaPredicted RBP18.27■□□□□ 0.52
HDAC10-203ENST00000415993 DCUN1D2Q6PH85 259 aa18.27■□□□□ 0.52
HDAC10-203ENST00000415993 NIPA2Q8N8Q9 360 aa18.27■□□□□ 0.52
HDAC10-203ENST00000415993 XPNPEP3Q9NQH7 507 aa18.27■□□□□ 0.52
HDAC10-203ENST00000415993 MTUS1Q9ULD2 1270 aa18.27■□□□□ 0.52
HDAC10-203ENST00000415993 USTQ9Y2C2 406 aa18.27■□□□□ 0.52
HDAC10-203ENST00000415993 UTP11Q9Y3A2 253 aaKnown RBP18.27■□□□□ 0.52
HDAC10-203ENST00000415993 SIGLEC16A6NMB1 481 aa18.27■□□□□ 0.52
HDAC10-203ENST00000415993 SYF2O95926 243 aaKnown RBP18.27■□□□□ 0.52
HDAC10-203ENST00000415993 CHRNA1P02708 482 aa18.27■□□□□ 0.52
HDAC10-203ENST00000415993 RFC1P35251 1148 aaPredicted RBP18.27■□□□□ 0.52
HDAC10-203ENST00000415993 SOX4Q06945 474 aaPredicted RBP18.27■□□□□ 0.52
HDAC10-203ENST00000415993 GPS2Q13227 327 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms