RNA–Protein interactions for RNA: ENST00000414829.2

LIMS1-206, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 439 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-206ENST00000414829 LEMD2Q8NC56 503 aa15.67■□□□□ 0.1
LIMS1-206ENST00000414829 OR10T2Q8NGX3 314 aa15.67■□□□□ 0.1
LIMS1-206ENST00000414829 SLC35C1Q96A29 364 aa15.67■□□□□ 0.1
LIMS1-206ENST00000414829 FUBP3Q96I24 572 aaKnown RBP eCLIP15.67■□□□□ 0.1
LIMS1-206ENST00000414829 FAM84AQ96KN4 292 aa15.67■□□□□ 0.1
LIMS1-206ENST00000414829 TNIP3Q96KP6 325 aa15.67■□□□□ 0.1
LIMS1-206ENST00000414829 PHF7Q9BWX1 381 aaPredicted RBP15.67■□□□□ 0.1
LIMS1-206ENST00000414829 CYP3A43Q9HB55 503 aa15.67■□□□□ 0.1
LIMS1-206ENST00000414829 RAB20Q9NX57 234 aa15.67■□□□□ 0.1
LIMS1-206ENST00000414829 INSL5Q9Y5Q6 135 aa15.67■□□□□ 0.1
LIMS1-206ENST00000414829 ATG2AQ2TAZ0 1938 aa15.66■□□□□ 0.1
LIMS1-206ENST00000414829 ANK1P16157 1881 aa15.66■□□□□ 0.1
LIMS1-206ENST00000414829 VNN1O95497 513 aa15.66■□□□□ 0.1
LIMS1-206ENST00000414829 SPATA31D3P0C874 917 aa15.66■□□□□ 0.1
LIMS1-206ENST00000414829 ALDH1A3P47895 512 aa15.66■□□□□ 0.1
LIMS1-206ENST00000414829 YWHAEP62258 255 aaKnown RBP15.66■□□□□ 0.1
LIMS1-206ENST00000414829 VEPH1Q14D04 833 aa15.66■□□□□ 0.1
LIMS1-206ENST00000414829 SLC39A12Q504Y0 691 aa15.66■□□□□ 0.1
LIMS1-206ENST00000414829 IQCEQ6IPM2 695 aa15.66■□□□□ 0.1
LIMS1-206ENST00000414829 CAVIN1Q6NZI2 390 aaKnown RBP15.66■□□□□ 0.1
LIMS1-206ENST00000414829 SPATA31D4Q6ZUB0 917 aa15.66■□□□□ 0.1
LIMS1-206ENST00000414829 TRIM59Q8IWR1 403 aa15.66■□□□□ 0.1
LIMS1-206ENST00000414829 TAS1R2Q8TE23 839 aa15.66■□□□□ 0.1
LIMS1-206ENST00000414829 ADAMTS19Q8TE59 1207 aa15.66■□□□□ 0.1
LIMS1-206ENST00000414829 CNOT6LQ96LI5 555 aaKnown RBP15.66■□□□□ 0.1
LIMS1-206ENST00000414829 USTQ9Y2C2 406 aa15.66■□□□□ 0.1
LIMS1-206ENST00000414829 COQ4Q9Y3A0 265 aa15.66■□□□□ 0.1
LIMS1-206ENST00000414829 PCDHB5Q9Y5E4 795 aa15.66■□□□□ 0.1
LIMS1-206ENST00000414829 XIRP2A4UGR9 3374 aa15.66■□□□□ 0.1
LIMS1-206ENST00000414829 ATP8B3O60423 1300 aa15.66■□□□□ 0.1
LIMS1-206ENST00000414829 TRIP11Q15643 1979 aa15.66■□□□□ 0.1
LIMS1-206ENST00000414829 MTMR11A4FU01 709 aa15.65■□□□□ 0.1
LIMS1-206ENST00000414829 RFPL2O75678 378 aa15.65■□□□□ 0.1
LIMS1-206ENST00000414829 AFPP02771 609 aaKnown RBP15.65■□□□□ 0.1
LIMS1-206ENST00000414829 TPM2P07951 284 aa15.65■□□□□ 0.1
LIMS1-206ENST00000414829 GNL1P36915 607 aaPredicted RBP15.65■□□□□ 0.1
LIMS1-206ENST00000414829 FMO5P49326 533 aa15.65■□□□□ 0.1
LIMS1-206ENST00000414829 EPHB3P54753 998 aa15.65■□□□□ 0.1
LIMS1-206ENST00000414829 RNF19BQ6ZMZ0 732 aa15.65■□□□□ 0.1
LIMS1-206ENST00000414829 ITIH5Q86UX2 942 aa15.65■□□□□ 0.1
LIMS1-206ENST00000414829 UNC93AQ86WB7 457 aa15.65■□□□□ 0.1
LIMS1-206ENST00000414829 OR6B3Q8NGW1 331 aa15.65■□□□□ 0.1
LIMS1-206ENST00000414829 ACSF2Q96CM8 615 aaPredicted RBP15.65■□□□□ 0.1
LIMS1-206ENST00000414829 CEP295NLQ96MC4 621 aa15.65■□□□□ 0.1
LIMS1-206ENST00000414829 UHRF1Q96T88 793 aaPredicted RBP15.65■□□□□ 0.1
LIMS1-206ENST00000414829 RTP3Q9BQQ7 232 aa15.65■□□□□ 0.1
LIMS1-206ENST00000414829 SYT15Q9BQS2 421 aa15.65■□□□□ 0.1
LIMS1-206ENST00000414829 WDR6Q9NNW5 1121 aaKnown RBP15.65■□□□□ 0.1
LIMS1-206ENST00000414829 YIPF1Q9Y548 306 aa15.65■□□□□ 0.1
LIMS1-206ENST00000414829 ASB3Q9Y575 518 aa15.65■□□□□ 0.1
LIMS1-206ENST00000414829 CLUHO75153 1309 aa15.65■□□□□ 0.1
LIMS1-206ENST00000414829 A8MXQ7 604 aa15.64■□□□□ 0.09
LIMS1-206ENST00000414829 FGF19O95750 216 aa15.64■□□□□ 0.09
LIMS1-206ENST00000414829 IL9P15248 144 aa15.64■□□□□ 0.09
LIMS1-206ENST00000414829 TBXAS1P24557 533 aaPredicted RBP15.64■□□□□ 0.09
LIMS1-206ENST00000414829 CFAP221Q4G0U5 840 aa15.64■□□□□ 0.09
LIMS1-206ENST00000414829 OTOP3Q7RTS5 596 aa15.64■□□□□ 0.09
LIMS1-206ENST00000414829 SPATA2LQ8IUW3 424 aaPredicted RBP15.64■□□□□ 0.09
LIMS1-206ENST00000414829 C12orf76Q8N812 135 aaPredicted RBP15.64■□□□□ 0.09
LIMS1-206ENST00000414829 TDRD5Q8NAT2 981 aaKnown RBP15.64■□□□□ 0.09
LIMS1-206ENST00000414829 ANKRD20A12PQ8NF67 263 aa15.64■□□□□ 0.09
LIMS1-206ENST00000414829 ENOX1Q8TC92 643 aaKnown RBP15.64■□□□□ 0.09
LIMS1-206ENST00000414829 KBTBD7Q8WVZ9 684 aa15.64■□□□□ 0.09
LIMS1-206ENST00000414829 ZNF707Q96C28 371 aaPredicted RBP15.64■□□□□ 0.09
LIMS1-206ENST00000414829 FAM81BQ96LP2 452 aa15.64■□□□□ 0.09
LIMS1-206ENST00000414829 PGLYRP2Q96PD5 576 aa15.64■□□□□ 0.09
LIMS1-206ENST00000414829 APOL5Q9BWW9 433 aa15.64■□□□□ 0.09
LIMS1-206ENST00000414829 ABI2Q9NYB9 513 aaPredicted RBP15.64■□□□□ 0.09
LIMS1-206ENST00000414829 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.64■□□□□ 0.09
LIMS1-206ENST00000414829 TMEM63CQ9P1W3 806 aa15.64■□□□□ 0.09
LIMS1-206ENST00000414829 POLIQ9UNA4 740 aa15.64■□□□□ 0.09
LIMS1-206ENST00000414829 BRWD1Q9NSI6 2320 aa15.63■□□□□ 0.09
LIMS1-206ENST00000414829 ZNF197O14709 1029 aa15.63■□□□□ 0.09
LIMS1-206ENST00000414829 OR4Q2P0C623 313 aa15.63■□□□□ 0.09
LIMS1-206ENST00000414829 EEF1GP26641 437 aaKnown RBP15.63■□□□□ 0.09
LIMS1-206ENST00000414829 ASPAP45381 313 aa15.63■□□□□ 0.09
LIMS1-206ENST00000414829 MTIF2P46199 727 aaKnown RBP15.63■□□□□ 0.09
LIMS1-206ENST00000414829 RPL10AP62906 217 aaKnown RBP15.63■□□□□ 0.09
LIMS1-206ENST00000414829 MYL5Q02045 173 aa15.63■□□□□ 0.09
LIMS1-206ENST00000414829 ZP2Q05996 745 aa15.63■□□□□ 0.09
LIMS1-206ENST00000414829 DUSP4Q13115 394 aa15.63■□□□□ 0.09
LIMS1-206ENST00000414829 MGAT5BQ3V5L5 792 aa15.63■□□□□ 0.09
LIMS1-206ENST00000414829 CBWD6Q4V339 395 aa15.63■□□□□ 0.09
LIMS1-206ENST00000414829 CBWD3Q5JTY5 395 aa15.63■□□□□ 0.09
LIMS1-206ENST00000414829 CBWD5Q5RIA9 395 aa15.63■□□□□ 0.09
LIMS1-206ENST00000414829 SMYD5Q6GMV2 418 aa15.63■□□□□ 0.09
LIMS1-206ENST00000414829 VSTM1Q6UX27 236 aa15.63■□□□□ 0.09
LIMS1-206ENST00000414829 SCARA5Q6ZMJ2 495 aa15.63■□□□□ 0.09
LIMS1-206ENST00000414829 PLCD3Q8N3E9 789 aa15.63■□□□□ 0.09
LIMS1-206ENST00000414829 ZNF512Q96ME7 567 aaPredicted RBP15.63■□□□□ 0.09
LIMS1-206ENST00000414829 SEPT5Q99719 369 aaPredicted RBP15.63■□□□□ 0.09
LIMS1-206ENST00000414829 BCO2Q9BYV7 579 aa15.63■□□□□ 0.09
LIMS1-206ENST00000414829 ELOVL4Q9GZR5 314 aa15.63■□□□□ 0.09
LIMS1-206ENST00000414829 SMYD3Q9H7B4 428 aa15.63■□□□□ 0.09
LIMS1-206ENST00000414829 AVENQ9NQS1 362 aaPredicted RBP15.63■□□□□ 0.09
LIMS1-206ENST00000414829 EHD2Q9NZN4 543 aa15.63■□□□□ 0.09
LIMS1-206ENST00000414829 ZFP37Q9Y6Q3 630 aaPredicted RBP15.63■□□□□ 0.09
LIMS1-206ENST00000414829 VWA8A3KMH1 1905 aa15.62■□□□□ 0.09
LIMS1-206ENST00000414829 CCL16O15467 120 aa15.62■□□□□ 0.09
LIMS1-206ENST00000414829 MAGEA11P43364 429 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms