RNA–Protein interactions for RNA: ENST00000414700.7

SHMT2-202, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 2,006 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-202ENST00000414700 DDX1Q92499 740 aaKnown RBP16.54■□□□□ 0.24
SHMT2-202ENST00000414700 FUT8Q9BYC5 575 aa16.54■□□□□ 0.24
SHMT2-202ENST00000414700 DEF6Q9H4E7 631 aa16.54■□□□□ 0.24
SHMT2-202ENST00000414700 ADAM21Q9UKJ8 722 aa16.54■□□□□ 0.24
SHMT2-202ENST00000414700 TFR2Q9UP52 801 aa16.54■□□□□ 0.24
SHMT2-202ENST00000414700 REXO2Q9Y3B8 237 aaKnown RBP16.54■□□□□ 0.24
SHMT2-202ENST00000414700 TIMM13Q9Y5L4 95 aaPredicted RBP16.54■□□□□ 0.24
SHMT2-202ENST00000414700 SSU72P8A0A1W2PR75 194 aa16.53■□□□□ 0.24
SHMT2-202ENST00000414700 ZSCAN12O43309 604 aa16.53■□□□□ 0.24
SHMT2-202ENST00000414700 CILPO75339 1184 aa16.53■□□□□ 0.24
SHMT2-202ENST00000414700 FGBP02675 491 aa16.53■□□□□ 0.24
SHMT2-202ENST00000414700 AMHP03971 560 aa16.53■□□□□ 0.24
SHMT2-202ENST00000414700 CFHP08603 1231 aa16.53■□□□□ 0.24
SHMT2-202ENST00000414700 OR1G1P47890 313 aa16.53■□□□□ 0.24
SHMT2-202ENST00000414700 GTF2A1P52655 376 aaPredicted RBP16.53■□□□□ 0.24
SHMT2-202ENST00000414700 NDST1P52848 882 aa16.53■□□□□ 0.24
SHMT2-202ENST00000414700 RSRC2Q7L4I2 434 aaKnown RBP16.53■□□□□ 0.24
SHMT2-202ENST00000414700 GLYCTKQ8IVS8 523 aa16.53■□□□□ 0.24
SHMT2-202ENST00000414700 LNX1Q8TBB1 728 aaPredicted RBP16.53■□□□□ 0.24
SHMT2-202ENST00000414700 FAXDC2Q96IV6 333 aa16.53■□□□□ 0.24
SHMT2-202ENST00000414700 SENP8Q96LD8 212 aa16.53■□□□□ 0.24
SHMT2-202ENST00000414700 FAM193BQ96PV7 902 aaPredicted RBP16.53■□□□□ 0.24
SHMT2-202ENST00000414700 ZSWIM1Q9BR11 485 aa16.53■□□□□ 0.24
SHMT2-202ENST00000414700 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.53■□□□□ 0.24
SHMT2-202ENST00000414700 ELOVL4Q9GZR5 314 aa16.53■□□□□ 0.24
SHMT2-202ENST00000414700 TSC2P49815 1807 aa16.53■□□□□ 0.24
SHMT2-202ENST00000414700 NT5C1B-RDH14C9J2C7 533 aa16.53■□□□□ 0.24
SHMT2-202ENST00000414700 DDX3XO00571 662 aaKnown RBP eCLIP16.53■□□□□ 0.241e-14■■□□□ 13.5
SHMT2-202ENST00000414700 CYB561D2O14569 222 aa16.53■□□□□ 0.24
SHMT2-202ENST00000414700 FANCGO15287 622 aa16.53■□□□□ 0.24
SHMT2-202ENST00000414700 HOXA2O43364 376 aa16.53■□□□□ 0.24
SHMT2-202ENST00000414700 AKR1B10O60218 316 aa16.53■□□□□ 0.24
SHMT2-202ENST00000414700 BAIAP3O94812 1187 aa16.53■□□□□ 0.24
SHMT2-202ENST00000414700 MMEP08473 750 aa16.53■□□□□ 0.24
SHMT2-202ENST00000414700 CHRNB2P17787 502 aa16.53■□□□□ 0.24
SHMT2-202ENST00000414700 AARSP49588 968 aaKnown RBP eCLIP16.53■□□□□ 0.24
SHMT2-202ENST00000414700 RAD23BP54727 409 aa16.53■□□□□ 0.24
SHMT2-202ENST00000414700 INCA1Q0VD86 236 aa16.53■□□□□ 0.24
SHMT2-202ENST00000414700 WSCD1Q658N2 575 aa16.53■□□□□ 0.24
SHMT2-202ENST00000414700 LIMS2Q7Z4I7 341 aa16.53■□□□□ 0.24
SHMT2-202ENST00000414700 TMEM173Q86WV6 379 aaPredicted RBP16.53■□□□□ 0.24
SHMT2-202ENST00000414700 APPL2Q8NEU8 664 aa16.53■□□□□ 0.24
SHMT2-202ENST00000414700 DDX27Q96GQ7 796 aaKnown RBP16.53■□□□□ 0.24
SHMT2-202ENST00000414700 CYP3A43Q9HB55 503 aa16.53■□□□□ 0.24
SHMT2-202ENST00000414700 RC3H2Q9HBD1 1191 aaKnown RBP16.53■□□□□ 0.24
SHMT2-202ENST00000414700 ADGRG1Q9Y653 693 aa16.53■□□□□ 0.24
SHMT2-202ENST00000414700 BZW2Q9Y6E2 419 aaKnown RBP16.53■□□□□ 0.24
SHMT2-202ENST00000414700 VWA8A3KMH1 1905 aa16.53■□□□□ 0.24
SHMT2-202ENST00000414700 LMO2P25791 158 aa16.52■□□□□ 0.24
SHMT2-202ENST00000414700 GNA15P30679 374 aa16.52■□□□□ 0.24
SHMT2-202ENST00000414700 PDE6CP51160 858 aa16.52■□□□□ 0.24
SHMT2-202ENST00000414700 CDR1P51861 262 aa16.52■□□□□ 0.24
SHMT2-202ENST00000414700 LEKR1Q6ZMV7 388 aa16.52■□□□□ 0.24
SHMT2-202ENST00000414700 CCDC170Q8IYT3 715 aa16.52■□□□□ 0.24
SHMT2-202ENST00000414700 SLC4A11Q8NBS3 891 aa16.52■□□□□ 0.24
SHMT2-202ENST00000414700 TFAP2BQ92481 460 aa16.52■□□□□ 0.24
SHMT2-202ENST00000414700 ZNF689Q96CS4 500 aaPredicted RBP16.52■□□□□ 0.24
SHMT2-202ENST00000414700 UROC1Q96N76 676 aa16.52■□□□□ 0.24
SHMT2-202ENST00000414700 LPIN3Q9BQK8 851 aa16.52■□□□□ 0.24
SHMT2-202ENST00000414700 BARX2Q9UMQ3 279 aaPredicted RBP16.52■□□□□ 0.24
SHMT2-202ENST00000414700 GOLGA6L9A6NEM1 432 aa16.52■□□□□ 0.23
SHMT2-202ENST00000414700 NRP1O14786 923 aa16.52■□□□□ 0.23
SHMT2-202ENST00000414700 HUS1O60921 280 aa16.52■□□□□ 0.23
SHMT2-202ENST00000414700 CCDC172P0C7W6 258 aa16.52■□□□□ 0.23
SHMT2-202ENST00000414700 BRD2P25440 801 aaKnown RBP16.52■□□□□ 0.23
SHMT2-202ENST00000414700 SLC11A1P49279 550 aa16.52■□□□□ 0.23
SHMT2-202ENST00000414700 FMO1Q01740 532 aa16.52■□□□□ 0.23
SHMT2-202ENST00000414700 DCLRE1AQ6PJP8 1040 aa16.52■□□□□ 0.23
SHMT2-202ENST00000414700 OSTM1Q86WC4 334 aa16.52■□□□□ 0.23
SHMT2-202ENST00000414700 ADGRF2Q8IZF7 708 aa16.52■□□□□ 0.23
SHMT2-202ENST00000414700 OR6B3Q8NGW1 331 aa16.52■□□□□ 0.23
SHMT2-202ENST00000414700 PCDHB18PQ96TA0 734 aa16.52■□□□□ 0.23
SHMT2-202ENST00000414700 AGPAT1Q99943 283 aa16.52■□□□□ 0.23
SHMT2-202ENST00000414700 DPEP3Q9H4B8 488 aa16.52■□□□□ 0.23
SHMT2-202ENST00000414700 SEPT11Q9NVA2 429 aaKnown RBP16.52■□□□□ 0.23
SHMT2-202ENST00000414700 PUF60Q9UHX1 559 aaKnown RBP16.52■□□□□ 0.23
SHMT2-202ENST00000414700 EFCAB14O75071 495 aa16.51■□□□□ 0.23
SHMT2-202ENST00000414700 ABL1P00519 1130 aa16.51■□□□□ 0.23
SHMT2-202ENST00000414700 PDGFRBP09619 1106 aa16.51■□□□□ 0.23
SHMT2-202ENST00000414700 CYLC1P35663 651 aaPredicted RBP16.51■□□□□ 0.23
SHMT2-202ENST00000414700 SLC18A3Q16572 532 aa16.51■□□□□ 0.23
SHMT2-202ENST00000414700 CCDC142Q17RM4 750 aa16.51■□□□□ 0.23
SHMT2-202ENST00000414700 DSTYKQ6XUX3 929 aa16.51■□□□□ 0.23
SHMT2-202ENST00000414700 FMNL3Q8IVF7 1028 aa16.51■□□□□ 0.23
SHMT2-202ENST00000414700 LRRC43Q8N309 656 aa16.51■□□□□ 0.23
SHMT2-202ENST00000414700 C12orf29Q8N999 325 aa16.51■□□□□ 0.23
SHMT2-202ENST00000414700 SLC30A5Q8TAD4 765 aa16.51■□□□□ 0.23
SHMT2-202ENST00000414700 MRPL9Q9BYD2 267 aaKnown RBP16.51■□□□□ 0.23
SHMT2-202ENST00000414700 PARD6BQ9BYG5 372 aa16.51■□□□□ 0.23
SHMT2-202ENST00000414700 TAS2R14Q9NYV8 317 aa16.51■□□□□ 0.23
SHMT2-202ENST00000414700 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.51■□□□□ 0.23
SHMT2-202ENST00000414700 MRFAP1Q9Y605 127 aa16.51■□□□□ 0.23
SHMT2-202ENST00000414700 EIF3CLB5ME19 914 aaKnown RBP16.5■□□□□ 0.23
SHMT2-202ENST00000414700 H3BQF6 201 aa16.5■□□□□ 0.23
SHMT2-202ENST00000414700 TACC1O75410 805 aa16.5■□□□□ 0.23
SHMT2-202ENST00000414700 BCAR1P56945 870 aa16.5■□□□□ 0.23
SHMT2-202ENST00000414700 YWHAEP62258 255 aaKnown RBP16.5■□□□□ 0.23
SHMT2-202ENST00000414700 BRD3Q15059 726 aa16.5■□□□□ 0.23
SHMT2-202ENST00000414700 TNS4Q8IZW8 715 aa16.5■□□□□ 0.23
SHMT2-202ENST00000414700 TOP6BLQ8N6T0 577 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms