RNA–Protein interactions for RNA: ENST00000414407.1

LINC00398-201, long intergenic non-protein coding RNA 398, humanhuman

TSL 2 BASIC

Gene LINC00398, Length 906 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00398-201ENST00000414407 SMTNL1A8MU46 457 aa17.62■□□□□ 0.41
LINC00398-201ENST00000414407 H3BQ06 376 aaPredicted RBP17.62■□□□□ 0.41
LINC00398-201ENST00000414407 ZMYND10O75800 440 aa17.62■□□□□ 0.41
LINC00398-201ENST00000414407 CLSTN1O94985 981 aa17.62■□□□□ 0.41
LINC00398-201ENST00000414407 POU2F2P09086 479 aa17.62■□□□□ 0.41
LINC00398-201ENST00000414407 HNRNPA1P09651 372 aaKnown RBP eCLIP17.62■□□□□ 0.41
LINC00398-201ENST00000414407 SPATA31D3P0C874 917 aa17.62■□□□□ 0.41
LINC00398-201ENST00000414407 ELF1P32519 619 aa17.62■□□□□ 0.41
LINC00398-201ENST00000414407 MRPS5P82675 430 aaKnown RBP17.62■□□□□ 0.41
LINC00398-201ENST00000414407 NCAPHQ15003 741 aa17.62■□□□□ 0.41
LINC00398-201ENST00000414407 NFE2Q16621 373 aaPredicted RBP17.62■□□□□ 0.41
LINC00398-201ENST00000414407 INTS6LQ5JSJ4 861 aaKnown RBP17.62■□□□□ 0.41
LINC00398-201ENST00000414407 SPOPLQ6IQ16 392 aa17.62■□□□□ 0.41
LINC00398-201ENST00000414407 RNF19BQ6ZMZ0 732 aa17.62■□□□□ 0.41
LINC00398-201ENST00000414407 SPATA31D4Q6ZUB0 917 aa17.62■□□□□ 0.41
LINC00398-201ENST00000414407 TTC39CQ8N584 583 aa17.62■□□□□ 0.41
LINC00398-201ENST00000414407 TMEM209Q96SK2 561 aa17.62■□□□□ 0.41
LINC00398-201ENST00000414407 MRPL45Q9BRJ2 306 aaKnown RBP17.62■□□□□ 0.41
LINC00398-201ENST00000414407 TUBGCP2Q9BSJ2 902 aa17.62■□□□□ 0.41
LINC00398-201ENST00000414407 ADAM7Q9H2U9 754 aa17.62■□□□□ 0.41
LINC00398-201ENST00000414407 FANCLQ9NW38 375 aa17.62■□□□□ 0.41
LINC00398-201ENST00000414407 GTPBP10A4D1E9 387 aaKnown RBP17.61■□□□□ 0.41
LINC00398-201ENST00000414407 LRRN2O75325 713 aa17.61■□□□□ 0.41
LINC00398-201ENST00000414407 C8AP07357 584 aa17.61■□□□□ 0.41
LINC00398-201ENST00000414407 OR4Q2P0C623 313 aa17.61■□□□□ 0.41
LINC00398-201ENST00000414407 ZNF165P49910 485 aa17.61■□□□□ 0.41
LINC00398-201ENST00000414407 ADCY1Q08828 1119 aa17.61■□□□□ 0.41
LINC00398-201ENST00000414407 SMAD4Q13485 552 aaKnown RBP17.61■□□□□ 0.41
LINC00398-201ENST00000414407 MAPRE1Q15691 268 aaKnown RBP17.61■□□□□ 0.41
LINC00398-201ENST00000414407 SLC39A12Q504Y0 691 aa17.61■□□□□ 0.41
LINC00398-201ENST00000414407 CES5AQ6NT32 575 aa17.61■□□□□ 0.41
LINC00398-201ENST00000414407 FAM171BQ6P995 826 aa17.61■□□□□ 0.41
LINC00398-201ENST00000414407 LRRTM3Q86VH5 581 aa17.61■□□□□ 0.41
LINC00398-201ENST00000414407 UNC93AQ86WB7 457 aa17.61■□□□□ 0.41
LINC00398-201ENST00000414407 EHBP1Q8NDI1 1231 aa17.61■□□□□ 0.41
LINC00398-201ENST00000414407 OR6B3Q8NGW1 331 aa17.61■□□□□ 0.41
LINC00398-201ENST00000414407 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.61■□□□□ 0.41
LINC00398-201ENST00000414407 LMO3Q8TAP4 145 aa17.61■□□□□ 0.41
LINC00398-201ENST00000414407 SPPL2BQ8TCT7 592 aa17.61■□□□□ 0.41
LINC00398-201ENST00000414407 PKMYT1Q99640 499 aa17.61■□□□□ 0.41
LINC00398-201ENST00000414407 SMYD3Q9H7B4 428 aa17.61■□□□□ 0.41
LINC00398-201ENST00000414407 FAM50BQ9Y247 325 aa17.61■□□□□ 0.41
LINC00398-201ENST00000414407 PLXNA3P51805 1871 aa17.61■□□□□ 0.41
LINC00398-201ENST00000414407 MTMR11A4FU01 709 aa17.6■□□□□ 0.41
LINC00398-201ENST00000414407 SPDYE4A6NLX3 237 aa17.6■□□□□ 0.41
LINC00398-201ENST00000414407 A8MXQ7 604 aa17.6■□□□□ 0.41
LINC00398-201ENST00000414407 PRRG1O14668 218 aa17.6■□□□□ 0.41
LINC00398-201ENST00000414407 TBXAS1P24557 533 aaPredicted RBP17.6■□□□□ 0.41
LINC00398-201ENST00000414407 LMO2P25791 158 aa17.6■□□□□ 0.41
LINC00398-201ENST00000414407 CDH8P55286 799 aa17.6■□□□□ 0.41
LINC00398-201ENST00000414407 TFF2Q03403 129 aa17.6■□□□□ 0.41
LINC00398-201ENST00000414407 INCA1Q0VD86 236 aa17.6■□□□□ 0.41
LINC00398-201ENST00000414407 VWA3BQ502W6 1294 aa17.6■□□□□ 0.41
LINC00398-201ENST00000414407 MIIPQ5JXC2 388 aa17.6■□□□□ 0.41
LINC00398-201ENST00000414407 SCARA5Q6ZMJ2 495 aa17.6■□□□□ 0.41
LINC00398-201ENST00000414407 GPR149Q86SP6 731 aa17.6■□□□□ 0.41
LINC00398-201ENST00000414407 SLC7A14Q8TBB6 771 aa17.6■□□□□ 0.41
LINC00398-201ENST00000414407 ELMO3Q96BJ8 720 aa17.6■□□□□ 0.41
LINC00398-201ENST00000414407 SYT15Q9BQS2 421 aa17.6■□□□□ 0.41
LINC00398-201ENST00000414407 PRKD2Q9BZL6 878 aa17.6■□□□□ 0.41
LINC00398-201ENST00000414407 SDCBP2Q9H190 292 aa17.6■□□□□ 0.41
LINC00398-201ENST00000414407 NDST4Q9H3R1 872 aa17.6■□□□□ 0.41
LINC00398-201ENST00000414407 CYP4F11Q9HBI6 524 aa17.6■□□□□ 0.41
LINC00398-201ENST00000414407 ABCB6Q9NP58 842 aa17.6■□□□□ 0.41
LINC00398-201ENST00000414407 MTCL1Q9Y4B5 1905 aaKnown RBP17.6■□□□□ 0.41
LINC00398-201ENST00000414407 BRWD1Q9NSI6 2320 aa17.59■□□□□ 0.41
LINC00398-201ENST00000414407 CCDC195A0A1B0GUA6 201 aa17.59■□□□□ 0.41
LINC00398-201ENST00000414407 LRRC10BA6NIK2 292 aa17.59■□□□□ 0.41
LINC00398-201ENST00000414407 MBTPS2O43462 519 aa17.59■□□□□ 0.41
LINC00398-201ENST00000414407 SEC24AO95486 1093 aa17.59■□□□□ 0.41
LINC00398-201ENST00000414407 VNN2O95498 520 aa17.59■□□□□ 0.41
LINC00398-201ENST00000414407 PDGFRBP09619 1106 aa17.59■□□□□ 0.41
LINC00398-201ENST00000414407 ZNF18P17022 549 aa17.59■□□□□ 0.41
LINC00398-201ENST00000414407 KCNA4P22459 653 aa17.59■□□□□ 0.41
LINC00398-201ENST00000414407 ACAT1P24752 427 aaKnown RBP17.59■□□□□ 0.41
LINC00398-201ENST00000414407 HSP90AA4PQ58FG1 418 aa17.59■□□□□ 0.41
LINC00398-201ENST00000414407 PPM1LQ5SGD2 360 aa17.59■□□□□ 0.41
LINC00398-201ENST00000414407 RARS2Q5T160 578 aaKnown RBP17.59■□□□□ 0.41
LINC00398-201ENST00000414407 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.59■□□□□ 0.41
LINC00398-201ENST00000414407 AOPEPQ8N6M6 819 aa17.59■□□□□ 0.41
LINC00398-201ENST00000414407 C12orf76Q8N812 135 aaPredicted RBP17.59■□□□□ 0.41
LINC00398-201ENST00000414407 ANKRD20A12PQ8NF67 263 aa17.59■□□□□ 0.41
LINC00398-201ENST00000414407 SUSD6Q92537 303 aa17.59■□□□□ 0.41
LINC00398-201ENST00000414407 TATDN2Q93075 761 aa17.59■□□□□ 0.41
LINC00398-201ENST00000414407 FUBP3Q96I24 572 aaKnown RBP eCLIP17.59■□□□□ 0.41
LINC00398-201ENST00000414407 TNIP3Q96KP6 325 aa17.59■□□□□ 0.41
LINC00398-201ENST00000414407 NECTIN4Q96NY8 510 aa17.59■□□□□ 0.41
LINC00398-201ENST00000414407 NT5C1BQ96P26 610 aa17.59■□□□□ 0.41
LINC00398-201ENST00000414407 PGLYRP2Q96PD5 576 aa17.59■□□□□ 0.41
LINC00398-201ENST00000414407 ASB2Q96Q27 587 aa17.59■□□□□ 0.41
LINC00398-201ENST00000414407 DNAI2Q9GZS0 605 aa17.59■□□□□ 0.41
LINC00398-201ENST00000414407 PCDHB5Q9Y5E4 795 aa17.59■□□□□ 0.41
LINC00398-201ENST00000414407 XIRP2A4UGR9 3374 aa17.59■□□□□ 0.41
LINC00398-201ENST00000414407 GRXCR2A6NFK2 248 aa17.58■□□□□ 0.4
LINC00398-201ENST00000414407 XYLBO75191 536 aa17.58■□□□□ 0.4
LINC00398-201ENST00000414407 RFPL2O75678 378 aa17.58■□□□□ 0.4
LINC00398-201ENST00000414407 TPM2P07951 284 aa17.58■□□□□ 0.4
LINC00398-201ENST00000414407 WEE2P0C1S8 567 aa17.58■□□□□ 0.4
LINC00398-201ENST00000414407 PTPN1P18031 435 aaKnown RBP17.58■□□□□ 0.4
LINC00398-201ENST00000414407 TRIM21P19474 475 aaKnown RBP17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms