RNA–Protein interactions for RNA: ENST00000413354.5

MCF2L-211, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-211ENST00000413354 PFKPQ01813 784 aa16.85■□□□□ 0.29
MCF2L-211ENST00000413354 ASTLQ6HA08 431 aaPredicted RBP16.85■□□□□ 0.29
MCF2L-211ENST00000413354 HS6ST3Q8IZP7 471 aa16.85■□□□□ 0.29
MCF2L-211ENST00000413354 TTC9BQ8N6N2 239 aa16.85■□□□□ 0.29
MCF2L-211ENST00000413354 FAM200AQ8TCP9 573 aa16.85■□□□□ 0.29
MCF2L-211ENST00000413354 TCEAL4Q96EI5 215 aa16.85■□□□□ 0.29
MCF2L-211ENST00000413354 FAM84AQ96KN4 292 aa16.85■□□□□ 0.29
MCF2L-211ENST00000413354 DNAJC25Q9H1X3 360 aa16.85■□□□□ 0.29
MCF2L-211ENST00000413354 KCTD10Q9H3F6 313 aa16.85■□□□□ 0.29
MCF2L-211ENST00000413354 ABI2Q9NYB9 513 aaPredicted RBP16.85■□□□□ 0.29
MCF2L-211ENST00000413354 SLC27A5Q9Y2P5 690 aa16.85■□□□□ 0.29
MCF2L-211ENST00000413354 PCDHB5Q9Y5E4 795 aa16.85■□□□□ 0.29
MCF2L-211ENST00000413354 DENND4CQ5VZ89 1909 aa16.85■□□□□ 0.29
MCF2L-211ENST00000413354 NR3C1P04150 777 aa16.84■□□□□ 0.29
MCF2L-211ENST00000413354 HAPLN1P10915 354 aaPredicted RBP16.84■□□□□ 0.29
MCF2L-211ENST00000413354 CCR2P41597 374 aa16.84■□□□□ 0.29
MCF2L-211ENST00000413354 TRPC3Q13507 836 aa16.84■□□□□ 0.29
MCF2L-211ENST00000413354 TAF12Q16514 161 aa16.84■□□□□ 0.29
MCF2L-211ENST00000413354 INTS6LQ5JSJ4 861 aaKnown RBP16.84■□□□□ 0.29
MCF2L-211ENST00000413354 TMC8Q8IU68 726 aa16.84■□□□□ 0.29
MCF2L-211ENST00000413354 FLCNQ8NFG4 579 aa16.84■□□□□ 0.29
MCF2L-211ENST00000413354 GPR152Q8TDT2 470 aa16.84■□□□□ 0.29
MCF2L-211ENST00000413354 ELSPBP1Q96BH3 223 aa16.84■□□□□ 0.29
MCF2L-211ENST00000413354 GCNAQ96QF7 691 aa16.84■□□□□ 0.29
MCF2L-211ENST00000413354 KXD1Q9BQD3 176 aa16.84■□□□□ 0.29
MCF2L-211ENST00000413354 SLITRK6Q9H5Y7 841 aa16.84■□□□□ 0.29
MCF2L-211ENST00000413354 ZFP14Q9HCL3 533 aa16.84■□□□□ 0.29
MCF2L-211ENST00000413354 ABCB6Q9NP58 842 aa16.84■□□□□ 0.29
MCF2L-211ENST00000413354 ARHGEF3Q9NR81 526 aa16.84■□□□□ 0.29
MCF2L-211ENST00000413354 DMAC2Q9NW81 257 aa16.84■□□□□ 0.29
MCF2L-211ENST00000413354 FRMD4BQ9Y2L6 1034 aa16.84■□□□□ 0.29
MCF2L-211ENST00000413354 PTPRDP23468 1912 aa16.84■□□□□ 0.29
MCF2L-211ENST00000413354 MIA3Q5JRA6 1907 aa16.84■□□□□ 0.29
MCF2L-211ENST00000413354 ZNF638Q14966 1978 aaKnown RBP16.84■□□□□ 0.29
MCF2L-211ENST00000413354 GABRDO14764 452 aa16.83■□□□□ 0.28
MCF2L-211ENST00000413354 PHACTR2O75167 634 aa16.83■□□□□ 0.28
MCF2L-211ENST00000413354 ATICP31939 592 aa16.83■□□□□ 0.28
MCF2L-211ENST00000413354 PTPN5P54829 565 aa16.83■□□□□ 0.28
MCF2L-211ENST00000413354 TNNC1P63316 161 aa16.83■□□□□ 0.28
MCF2L-211ENST00000413354 SOWAHAQ2M3V2 549 aa16.83■□□□□ 0.28
MCF2L-211ENST00000413354 DNAJB7Q7Z6W7 309 aaPredicted RBP16.83■□□□□ 0.28
MCF2L-211ENST00000413354 LRRTM3Q86VH5 581 aa16.83■□□□□ 0.28
MCF2L-211ENST00000413354 GUF1Q8N442 669 aaKnown RBP16.83■□□□□ 0.28
MCF2L-211ENST00000413354 SHKBP1Q8TBC3 707 aa16.83■□□□□ 0.28
MCF2L-211ENST00000413354 SMARCD2Q92925 531 aa16.83■□□□□ 0.28
MCF2L-211ENST00000413354 SYAP1Q96A49 352 aaPredicted RBP16.83■□□□□ 0.28
MCF2L-211ENST00000413354 SHDQ96IW2 340 aa16.83■□□□□ 0.28
MCF2L-211ENST00000413354 ASB16Q96NS5 453 aa16.83■□□□□ 0.28
MCF2L-211ENST00000413354 LRRC3Q9BY71 257 aa16.83■□□□□ 0.28
MCF2L-211ENST00000413354 IRF2BPLQ9H1B7 796 aa16.83■□□□□ 0.28
MCF2L-211ENST00000413354 RMND1Q9NWS8 449 aa16.83■□□□□ 0.28
MCF2L-211ENST00000413354 HOOK1Q9UJC3 728 aaKnown RBP16.83■□□□□ 0.28
MCF2L-211ENST00000413354 CA14Q9ULX7 337 aa16.83■□□□□ 0.28
MCF2L-211ENST00000413354 TRAF3IP3Q9Y228 551 aa16.83■□□□□ 0.28
MCF2L-211ENST00000413354 OBSL1O75147 1896 aa16.82■□□□□ 0.28
MCF2L-211ENST00000413354 MOSPD3O75425 235 aa16.82■□□□□ 0.28
MCF2L-211ENST00000413354 SOAT2O75908 522 aa16.82■□□□□ 0.28
MCF2L-211ENST00000413354 STAU1O95793 577 aaKnown RBP16.82■□□□□ 0.28
MCF2L-211ENST00000413354 FAM163BP0C2L3 166 aa16.82■□□□□ 0.28
MCF2L-211ENST00000413354 AOC1P19801 751 aa16.82■□□□□ 0.28
MCF2L-211ENST00000413354 CDC25CP30307 473 aa16.82■□□□□ 0.28
MCF2L-211ENST00000413354 FAM160A1Q05DH4 1040 aa16.82■□□□□ 0.28
MCF2L-211ENST00000413354 BIRC3Q13489 604 aa16.82■□□□□ 0.28
MCF2L-211ENST00000413354 TEAD2Q15562 447 aa16.82■□□□□ 0.28
MCF2L-211ENST00000413354 MAPRE1Q15691 268 aaKnown RBP16.82■□□□□ 0.28
MCF2L-211ENST00000413354 NFIL3Q16649 462 aa16.82■□□□□ 0.28
MCF2L-211ENST00000413354 ARHGAP15Q53QZ3 475 aa16.82■□□□□ 0.28
MCF2L-211ENST00000413354 CWF19L1Q69YN2 538 aaKnown RBP16.82■□□□□ 0.28
MCF2L-211ENST00000413354 PHLDB3Q6NSJ2 640 aa16.82■□□□□ 0.28
MCF2L-211ENST00000413354 LIMS2Q7Z4I7 341 aa16.82■□□□□ 0.28
MCF2L-211ENST00000413354 FMR1NBQ8N0W7 255 aaPredicted RBP16.82■□□□□ 0.28
MCF2L-211ENST00000413354 ST13P5Q8NFI4 369 aaPredicted RBP16.82■□□□□ 0.28
MCF2L-211ENST00000413354 PARD3BQ8TEW8 1205 aa16.82■□□□□ 0.28
MCF2L-211ENST00000413354 E2F7Q96AV8 911 aa16.82■□□□□ 0.28
MCF2L-211ENST00000413354 FUBP3Q96I24 572 aaKnown RBP eCLIP16.82■□□□□ 0.28
MCF2L-211ENST00000413354 MMS19Q96T76 1030 aa16.82■□□□□ 0.28
MCF2L-211ENST00000413354 LPIN3Q9BQK8 851 aa16.82■□□□□ 0.28
MCF2L-211ENST00000413354 RPP25Q9BUL9 199 aaKnown RBP16.82■□□□□ 0.28
MCF2L-211ENST00000413354 ZMYM5Q9UJ78 669 aa16.82■□□□□ 0.28
MCF2L-211ENST00000413354 CDH9Q9ULB4 789 aa16.82■□□□□ 0.28
MCF2L-211ENST00000413354 CIZ1Q9ULV3 898 aaPredicted RBP16.82■□□□□ 0.28
MCF2L-211ENST00000413354 A0A1W2PRU2 124 aa16.81■□□□□ 0.28
MCF2L-211ENST00000413354 KRBA1A5PL33 1030 aa16.81■□□□□ 0.28
MCF2L-211ENST00000413354 STK25O00506 426 aa16.81■□□□□ 0.28
MCF2L-211ENST00000413354 MAPK13O15264 365 aa16.81■□□□□ 0.28
MCF2L-211ENST00000413354 ATF6P18850 670 aa16.81■□□□□ 0.28
MCF2L-211ENST00000413354 WARSP23381 471 aaKnown RBP16.81■□□□□ 0.28
MCF2L-211ENST00000413354 ACAT1P24752 427 aaKnown RBP16.81■□□□□ 0.28
MCF2L-211ENST00000413354 RPL13P26373 211 aaKnown RBP16.81■□□□□ 0.28
MCF2L-211ENST00000413354 RPL10AP62906 217 aaKnown RBP16.81■□□□□ 0.28
MCF2L-211ENST00000413354 GPC5P78333 572 aa16.81■□□□□ 0.28
MCF2L-211ENST00000413354 CLDN10P78369 228 aa16.81■□□□□ 0.28
MCF2L-211ENST00000413354 SNW1Q13573 536 aaKnown RBP16.81■□□□□ 0.28
MCF2L-211ENST00000413354 FAM78AQ5JUQ0 283 aa16.81■□□□□ 0.28
MCF2L-211ENST00000413354 IER5LQ5T953 404 aa16.81■□□□□ 0.28
MCF2L-211ENST00000413354 CEP135Q66GS9 1140 aa16.81■□□□□ 0.28
MCF2L-211ENST00000413354 SCARA3Q6AZY7 606 aa16.81■□□□□ 0.28
MCF2L-211ENST00000413354 C4orf50Q6ZRC1 276 aa16.81■□□□□ 0.28
MCF2L-211ENST00000413354 OSTM1Q86WC4 334 aa16.81■□□□□ 0.28
MCF2L-211ENST00000413354 TMEM105Q8N8V8 129 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms