RNA–Protein interactions for RNA: ENST00000412342.5

HDAC8-210, Transcript of histone deacetylase 8, humanhuman

TSL 1 (best)

Gene HDAC8, Length 679 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-210ENST00000412342 CCDC183Q5T5S1 534 aa14.11□□□□□ -0.15
HDAC8-210ENST00000412342 SPOPLQ6IQ16 392 aa14.11□□□□□ -0.15
HDAC8-210ENST00000412342 CCDC149Q6ZUS6 474 aa14.11□□□□□ -0.15
HDAC8-210ENST00000412342 IRF2BP1Q8IU81 584 aa14.11□□□□□ -0.15
HDAC8-210ENST00000412342 TRIM59Q8IWR1 403 aa14.11□□□□□ -0.15
HDAC8-210ENST00000412342 ADHFE1Q8IWW8 467 aa14.11□□□□□ -0.15
HDAC8-210ENST00000412342 THEM5Q8N1Q8 247 aa14.11□□□□□ -0.15
HDAC8-210ENST00000412342 TTC9BQ8N6N2 239 aa14.11□□□□□ -0.15
HDAC8-210ENST00000412342 ATAD1Q8NBU5 361 aa14.11□□□□□ -0.15
HDAC8-210ENST00000412342 SMG7Q92540 1137 aaKnown RBP14.11□□□□□ -0.15
HDAC8-210ENST00000412342 TAF4BQ92750 862 aa14.11□□□□□ -0.15
HDAC8-210ENST00000412342 SEMA4DQ92854 862 aa14.11□□□□□ -0.15
HDAC8-210ENST00000412342 RIPOR3Q96MK2 946 aa14.11□□□□□ -0.15
HDAC8-210ENST00000412342 PGLYRP2Q96PD5 576 aa14.11□□□□□ -0.15
HDAC8-210ENST00000412342 UHRF1Q96T88 793 aaPredicted RBP14.11□□□□□ -0.15
HDAC8-210ENST00000412342 PHF7Q9BWX1 381 aaPredicted RBP14.11□□□□□ -0.15
HDAC8-210ENST00000412342 SRRTQ9BXP5 876 aaKnown RBP14.11□□□□□ -0.15
HDAC8-210ENST00000412342 SMYD3Q9H7B4 428 aa14.11□□□□□ -0.15
HDAC8-210ENST00000412342 MMRN2Q9H8L6 949 aa14.11□□□□□ -0.15
HDAC8-210ENST00000412342 CYP4F11Q9HBI6 524 aa14.11□□□□□ -0.15
HDAC8-210ENST00000412342 COQ4Q9Y3A0 265 aa14.11□□□□□ -0.15
HDAC8-210ENST00000412342 NCOR1O75376 2440 aa14.11□□□□□ -0.15
HDAC8-210ENST00000412342 SPDYE4A6NLX3 237 aa14.1□□□□□ -0.15
HDAC8-210ENST00000412342 LOC730098B7Z3J9 87 aa14.1□□□□□ -0.15
HDAC8-210ENST00000412342 CCL16O15467 120 aa14.1□□□□□ -0.15
HDAC8-210ENST00000412342 ERCC5P28715 1186 aaPredicted RBP14.1□□□□□ -0.15
HDAC8-210ENST00000412342 ASPAP45381 313 aa14.1□□□□□ -0.15
HDAC8-210ENST00000412342 TNNC1P63316 161 aa14.1□□□□□ -0.15
HDAC8-210ENST00000412342 MYL7Q01449 175 aa14.1□□□□□ -0.15
HDAC8-210ENST00000412342 DUSP4Q13115 394 aa14.1□□□□□ -0.15
HDAC8-210ENST00000412342 SLC39A12Q504Y0 691 aa14.1□□□□□ -0.15
HDAC8-210ENST00000412342 DCAF17Q5H9S7 520 aaPredicted RBP14.1□□□□□ -0.15
HDAC8-210ENST00000412342 ZNF667Q5HYK9 610 aa14.1□□□□□ -0.15
HDAC8-210ENST00000412342 FAM171BQ6P995 826 aa14.1□□□□□ -0.15
HDAC8-210ENST00000412342 MMS19Q96T76 1030 aa14.1□□□□□ -0.15
HDAC8-210ENST00000412342 PI4K2AQ9BTU6 479 aa14.1□□□□□ -0.15
HDAC8-210ENST00000412342 BCO2Q9BYV7 579 aa14.1□□□□□ -0.15
HDAC8-210ENST00000412342 WDR6Q9NNW5 1121 aaKnown RBP14.1□□□□□ -0.15
HDAC8-210ENST00000412342 CRTAC1Q9NQ79 661 aa14.1□□□□□ -0.15
HDAC8-210ENST00000412342 HSFX1Q9UBD0 423 aa14.1□□□□□ -0.15
HDAC8-210ENST00000412342 NXF1Q9UBU9 619 aaKnown RBP14.1□□□□□ -0.15
HDAC8-210ENST00000412342 YIPF1Q9Y548 306 aa14.1□□□□□ -0.15
HDAC8-210ENST00000412342 BDP1A6H8Y1 2624 aa14.1□□□□□ -0.15
HDAC8-210ENST00000412342 MYBPHLA2RUH7 354 aa14.09□□□□□ -0.15
HDAC8-210ENST00000412342 PMM2O15305 246 aa14.09□□□□□ -0.15
HDAC8-210ENST00000412342 STX10O60499 249 aa14.09□□□□□ -0.15
HDAC8-210ENST00000412342 ATP2C2O75185 946 aa14.09□□□□□ -0.15
HDAC8-210ENST00000412342 GNA14O95837 355 aa14.09□□□□□ -0.15
HDAC8-210ENST00000412342 RAP1GAPP47736 663 aa14.09□□□□□ -0.15
HDAC8-210ENST00000412342 FMO5P49326 533 aa14.09□□□□□ -0.15
HDAC8-210ENST00000412342 CDH8P55286 799 aa14.09□□□□□ -0.15
HDAC8-210ENST00000412342 NOP14P78316 857 aaKnown RBP14.09□□□□□ -0.15
HDAC8-210ENST00000412342 CCDC40Q4G0X9 1142 aa14.09□□□□□ -0.15
HDAC8-210ENST00000412342 CT47A1Q5JQC4 288 aaPredicted RBP14.09□□□□□ -0.15
HDAC8-210ENST00000412342 TCERG1LQ5VWI1 586 aa14.09□□□□□ -0.15
HDAC8-210ENST00000412342 FBXL13Q8NEE6 735 aa14.09□□□□□ -0.15
HDAC8-210ENST00000412342 C2orf15Q8WU43 125 aaKnown RBP14.09□□□□□ -0.15
HDAC8-210ENST00000412342 SYT15Q9BQS2 421 aa14.09□□□□□ -0.15
HDAC8-210ENST00000412342 DNAJC25Q9H1X3 360 aa14.09□□□□□ -0.15
HDAC8-210ENST00000412342 HCFC1R1Q9NWW0 138 aa14.09□□□□□ -0.15
HDAC8-210ENST00000412342 CEP72Q9P209 647 aa14.09□□□□□ -0.15
HDAC8-210ENST00000412342 DNMT3BQ9UBC3 853 aaKnown RBP14.09□□□□□ -0.15
HDAC8-210ENST00000412342 CLUHO75153 1309 aa14.09□□□□□ -0.15
HDAC8-210ENST00000412342 GREB1Q4ZG55 1949 aa14.08□□□□□ -0.16
HDAC8-210ENST00000412342 PRRG1O14668 218 aa14.08□□□□□ -0.16
HDAC8-210ENST00000412342 N4BP1O75113 896 aaKnown RBP14.08□□□□□ -0.16
HDAC8-210ENST00000412342 ATF6P18850 670 aa14.08□□□□□ -0.16
HDAC8-210ENST00000412342 PCSK1P29120 753 aa14.08□□□□□ -0.16
HDAC8-210ENST00000412342 ELF1P32519 619 aa14.08□□□□□ -0.16
HDAC8-210ENST00000412342 CDR1P51861 262 aa14.08□□□□□ -0.16
HDAC8-210ENST00000412342 PSMC1P62191 440 aaKnown RBP14.08□□□□□ -0.16
HDAC8-210ENST00000412342 NTHL1P78549 312 aa14.08□□□□□ -0.16
HDAC8-210ENST00000412342 TSPY1Q01534 308 aa14.08□□□□□ -0.16
HDAC8-210ENST00000412342 TWF1Q12792 350 aa14.08□□□□□ -0.16
HDAC8-210ENST00000412342 SMARCB1Q12824 385 aa14.08□□□□□ -0.16
HDAC8-210ENST00000412342 SCARA5Q6ZMJ2 495 aa14.08□□□□□ -0.16
HDAC8-210ENST00000412342 GRASPQ7Z6J2 395 aaPredicted RBP14.08□□□□□ -0.16
HDAC8-210ENST00000412342 DCP1BQ8IZD4 617 aaKnown RBP14.08□□□□□ -0.16
HDAC8-210ENST00000412342 SPPL2BQ8TCT7 592 aa14.08□□□□□ -0.16
HDAC8-210ENST00000412342 CNOT6LQ96LI5 555 aaKnown RBP14.08□□□□□ -0.16
HDAC8-210ENST00000412342 DPEP3Q9H4B8 488 aa14.08□□□□□ -0.16
HDAC8-210ENST00000412342 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.08□□□□□ -0.16
HDAC8-210ENST00000412342 RAB20Q9NX57 234 aa14.08□□□□□ -0.16
HDAC8-210ENST00000412342 DACH1Q9UI36 760 aa14.08□□□□□ -0.16
HDAC8-210ENST00000412342 GTF3C4Q9UKN8 822 aa14.08□□□□□ -0.16
HDAC8-210ENST00000412342 CDH9Q9ULB4 789 aa14.08□□□□□ -0.16
HDAC8-210ENST00000412342 USTQ9Y2C2 406 aa14.08□□□□□ -0.16
HDAC8-210ENST00000412342 SLC27A5Q9Y2P5 690 aa14.08□□□□□ -0.16
HDAC8-210ENST00000412342 OBSL1O75147 1896 aa14.08□□□□□ -0.16
HDAC8-210ENST00000412342 C2CD4DB7Z1M9 353 aa14.07□□□□□ -0.16
HDAC8-210ENST00000412342 NRG2O14511 850 aaPredicted RBP14.07□□□□□ -0.16
HDAC8-210ENST00000412342 XYLBO75191 536 aa14.07□□□□□ -0.16
HDAC8-210ENST00000412342 SOAT2O75908 522 aa14.07□□□□□ -0.16
HDAC8-210ENST00000412342 FGFR1OPO95684 399 aaKnown RBP14.07□□□□□ -0.16
HDAC8-210ENST00000412342 LRG1P02750 347 aa14.07□□□□□ -0.16
HDAC8-210ENST00000412342 HAPLN1P10915 354 aaPredicted RBP14.07□□□□□ -0.16
HDAC8-210ENST00000412342 GNL1P36915 607 aaPredicted RBP14.07□□□□□ -0.16
HDAC8-210ENST00000412342 EPHA5P54756 1037 aa14.07□□□□□ -0.16
HDAC8-210ENST00000412342 INCA1Q0VD86 236 aa14.07□□□□□ -0.16
HDAC8-210ENST00000412342 NFE2Q16621 373 aaPredicted RBP14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms