RNA–Protein interactions for RNA: ENST00000411938.1

LSM8-202, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

TSL 3

Gene LSM8, Length 290 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-202ENST00000411938 PGLYRP2Q96PD5 576 aa7.56□□□□□ -1.2
LSM8-202ENST00000411938 FUCA2Q9BTY2 467 aa7.56□□□□□ -1.2
LSM8-202ENST00000411938 POLR3CQ9BUI4 534 aaPredicted RBP7.56□□□□□ -1.2
LSM8-202ENST00000411938 POLR3FQ9H1D9 316 aaPredicted RBP7.56□□□□□ -1.2
LSM8-202ENST00000411938 DNAJC25Q9H1X3 360 aa7.56□□□□□ -1.2
LSM8-202ENST00000411938 TASP1Q9H6P5 420 aa7.56□□□□□ -1.2
LSM8-202ENST00000411938 ZSWIM4Q9H7M6 989 aa7.56□□□□□ -1.2
LSM8-202ENST00000411938 HPS4Q9NQG7 708 aa7.56□□□□□ -1.2
LSM8-202ENST00000411938 TMEM74BQ9NUR3 256 aa7.56□□□□□ -1.2
LSM8-202ENST00000411938 PRMT7Q9NVM4 692 aaPredicted RBP7.56□□□□□ -1.2
LSM8-202ENST00000411938 VPS54Q9P1Q0 977 aa7.56□□□□□ -1.2
LSM8-202ENST00000411938 VAV3Q9UKW4 847 aa7.56□□□□□ -1.2
LSM8-202ENST00000411938 SLC6A14Q9UN76 642 aa7.56□□□□□ -1.2
LSM8-202ENST00000411938 USP20Q9Y2K6 914 aa7.56□□□□□ -1.2
LSM8-202ENST00000411938 STK24Q9Y6E0 443 aa7.56□□□□□ -1.2
LSM8-202ENST00000411938 SMIM28A0A1B0GU29 152 aa7.55□□□□□ -1.2
LSM8-202ENST00000411938 PODXLO00592 558 aa7.55□□□□□ -1.2
LSM8-202ENST00000411938 ATXN7O15265 892 aaPredicted RBP7.55□□□□□ -1.2
LSM8-202ENST00000411938 PRPF3O43395 683 aaKnown RBP7.55□□□□□ -1.2
LSM8-202ENST00000411938 SH3BP5O60239 455 aa7.55□□□□□ -1.2
LSM8-202ENST00000411938 DGAT1O75907 488 aa7.55□□□□□ -1.2
LSM8-202ENST00000411938 FGF19O95750 216 aa7.55□□□□□ -1.2
LSM8-202ENST00000411938 CD59P13987 128 aa7.55□□□□□ -1.2
LSM8-202ENST00000411938 ARSAP15289 507 aa7.55□□□□□ -1.2
LSM8-202ENST00000411938 MARCKSP29966 332 aaPredicted RBP7.55□□□□□ -1.2
LSM8-202ENST00000411938 DPP6P42658 865 aa7.55□□□□□ -1.2
LSM8-202ENST00000411938 CYP4F8P98187 520 aa7.55□□□□□ -1.2
LSM8-202ENST00000411938 DNM1Q05193 864 aaKnown RBP7.55□□□□□ -1.2
LSM8-202ENST00000411938 SOX4Q06945 474 aaPredicted RBP7.55□□□□□ -1.2
LSM8-202ENST00000411938 CYP4F3Q08477 520 aa7.55□□□□□ -1.2
LSM8-202ENST00000411938 DUSP4Q13115 394 aa7.55□□□□□ -1.2
LSM8-202ENST00000411938 LYSMD4Q5XG99 296 aa7.55□□□□□ -1.2
LSM8-202ENST00000411938 EEF1DP3Q658K8 133 aa7.55□□□□□ -1.2
LSM8-202ENST00000411938 NCAPH2Q6IBW4 605 aa7.55□□□□□ -1.2
LSM8-202ENST00000411938 CC2D1AQ6P1N0 951 aaPredicted RBP7.55□□□□□ -1.2
LSM8-202ENST00000411938 SLC23A3Q6PIS1 610 aa7.55□□□□□ -1.2
LSM8-202ENST00000411938 MAEAQ7L5Y9 396 aa7.55□□□□□ -1.2
LSM8-202ENST00000411938 DNAJB7Q7Z6W7 309 aaPredicted RBP7.55□□□□□ -1.2
LSM8-202ENST00000411938 ZBTB8OSQ8IWT0 167 aa7.55□□□□□ -1.2
LSM8-202ENST00000411938 MINDY1Q8N5J2 469 aa7.55□□□□□ -1.2
LSM8-202ENST00000411938 DAGLBQ8NCG7 672 aa7.55□□□□□ -1.2
LSM8-202ENST00000411938 APPL2Q8NEU8 664 aa7.55□□□□□ -1.2
LSM8-202ENST00000411938 OR2I1PQ8NGU4 316 aa7.55□□□□□ -1.2
LSM8-202ENST00000411938 SPACA7Q96KW9 195 aa7.55□□□□□ -1.2
LSM8-202ENST00000411938 CNOT6LQ96LI5 555 aaKnown RBP7.55□□□□□ -1.2
LSM8-202ENST00000411938 FAM20AQ96MK3 541 aa7.55□□□□□ -1.2
LSM8-202ENST00000411938 GCNAQ96QF7 691 aa7.55□□□□□ -1.2
LSM8-202ENST00000411938 FAM83CQ9BQN1 747 aa7.55□□□□□ -1.2
LSM8-202ENST00000411938 LARP6Q9BRS8 491 aaKnown RBP7.55□□□□□ -1.2
LSM8-202ENST00000411938 FZD8Q9H461 694 aa7.55□□□□□ -1.2
LSM8-202ENST00000411938 APOBEC2Q9Y235 224 aaKnown RBP7.55□□□□□ -1.2
LSM8-202ENST00000411938 SLC27A5Q9Y2P5 690 aa7.55□□□□□ -1.2
LSM8-202ENST00000411938 ASB3Q9Y575 518 aa7.55□□□□□ -1.2
LSM8-202ENST00000411938 COL6A6A6NMZ7 2263 aa7.55□□□□□ -1.2
LSM8-202ENST00000411938 SPTAN1Q13813 2472 aaKnown RBP7.55□□□□□ -1.2
LSM8-202ENST00000411938 KNL1Q8NG31 2342 aa7.55□□□□□ -1.2
LSM8-202ENST00000411938 A0A087WV48 116 aa7.54□□□□□ -1.2
LSM8-202ENST00000411938 ARHGAP6O43182 974 aa7.54□□□□□ -1.2
LSM8-202ENST00000411938 SLC37A4O43826 429 aa7.54□□□□□ -1.2
LSM8-202ENST00000411938 ALDH1A2O94788 518 aa7.54□□□□□ -1.2
LSM8-202ENST00000411938 OR4Q2P0C623 313 aa7.54□□□□□ -1.2
LSM8-202ENST00000411938 ITPKAP23677 461 aa7.54□□□□□ -1.2
LSM8-202ENST00000411938 ABCG1P45844 678 aa7.54□□□□□ -1.2
LSM8-202ENST00000411938 YARSP54577 528 aaKnown RBP7.54□□□□□ -1.2
LSM8-202ENST00000411938 BFSP1Q12934 665 aa7.54□□□□□ -1.2
LSM8-202ENST00000411938 TOB2Q14106 344 aaPredicted RBP7.54□□□□□ -1.2
LSM8-202ENST00000411938 FAM187BQ17R55 369 aa7.54□□□□□ -1.2
LSM8-202ENST00000411938 DUOXA1Q1HG43 343 aa7.54□□□□□ -1.2
LSM8-202ENST00000411938 DCAF4L1Q3SXM0 396 aa7.54□□□□□ -1.2
LSM8-202ENST00000411938 C2orf27AQ580R0 203 aa7.54□□□□□ -1.2
LSM8-202ENST00000411938 LMBRD2Q68DH5 695 aaPredicted RBP7.54□□□□□ -1.2
LSM8-202ENST00000411938 MOXD1Q6UVY6 613 aa7.54□□□□□ -1.2
LSM8-202ENST00000411938 DHX32Q7L7V1 743 aaKnown RBP7.54□□□□□ -1.2
LSM8-202ENST00000411938 ITIH5Q86UX2 942 aa7.54□□□□□ -1.2
LSM8-202ENST00000411938 RASSF3Q86WH2 238 aa7.54□□□□□ -1.2
LSM8-202ENST00000411938 SCUBE3Q8IX30 993 aa7.54□□□□□ -1.2
LSM8-202ENST00000411938 ZNF843Q8N446 348 aa7.54□□□□□ -1.2
LSM8-202ENST00000411938 CCDC33Q8N5R6 958 aa7.54□□□□□ -1.2
LSM8-202ENST00000411938 NECAB1Q8N987 351 aa7.54□□□□□ -1.2
LSM8-202ENST00000411938 MDGA1Q8NFP4 955 aa7.54□□□□□ -1.2
LSM8-202ENST00000411938 CCDC26Q8TAB7 109 aa7.54□□□□□ -1.2
LSM8-202ENST00000411938 CEP76Q8TAP6 659 aa7.54□□□□□ -1.2
LSM8-202ENST00000411938 PIP4K2CQ8TBX8 421 aa7.54□□□□□ -1.2
LSM8-202ENST00000411938 DDX12PQ92771 950 aa7.54□□□□□ -1.2
LSM8-202ENST00000411938 EZH1Q92800 747 aaPredicted RBP7.54□□□□□ -1.2
LSM8-202ENST00000411938 GTF3C6Q969F1 213 aa7.54□□□□□ -1.2
LSM8-202ENST00000411938 SUSD3Q96L08 255 aa7.54□□□□□ -1.2
LSM8-202ENST00000411938 DCBLD2Q96PD2 775 aa7.54□□□□□ -1.2
LSM8-202ENST00000411938 FNBP1Q96RU3 617 aa7.54□□□□□ -1.2
LSM8-202ENST00000411938 SLC46A2Q9BY10 475 aa7.54□□□□□ -1.2
LSM8-202ENST00000411938 CRISPLD1Q9H336 500 aa7.54□□□□□ -1.2
LSM8-202ENST00000411938 GPRC5CQ9NQ84 441 aa7.54□□□□□ -1.2
LSM8-202ENST00000411938 SLC38A7Q9NVC3 462 aa7.54□□□□□ -1.2
LSM8-202ENST00000411938 DKK4Q9UBT3 224 aa7.54□□□□□ -1.2
LSM8-202ENST00000411938 USP25Q9UHP3 1055 aa7.54□□□□□ -1.2
LSM8-202ENST00000411938 PILRBQ9UKJ0 227 aa7.54□□□□□ -1.2
LSM8-202ENST00000411938 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.54□□□□□ -1.2
LSM8-202ENST00000411938 PLXNB3Q9ULL4 1909 aa7.54□□□□□ -1.2
LSM8-202ENST00000411938 NOTCH2Q04721 2471 aa7.54□□□□□ -1.2
LSM8-202ENST00000411938 TRABD2BA6NFA1 517 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms