RNA–Protein interactions for RNA: ENST00000411796.6

CCDC196-203, Transcript of coiled-coil domain containing 196, humanhuman

TSL 1 (best)

Gene CCDC196, Length 1,132 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196-203ENST00000411796 STAG3L1P0CL83 205 aa9.26□□□□□ -0.93
CCDC196-203ENST00000411796 EPB41P11171 864 aaKnown RBP9.26□□□□□ -0.93
CCDC196-203ENST00000411796 ESRRAP11474 423 aaPredicted RBP9.26□□□□□ -0.93
CCDC196-203ENST00000411796 RAG1P15918 1043 aa9.26□□□□□ -0.93
CCDC196-203ENST00000411796 ITPKAP23677 461 aa9.26□□□□□ -0.93
CCDC196-203ENST00000411796 NR2F2P24468 414 aa9.26□□□□□ -0.93
CCDC196-203ENST00000411796 CASP5P51878 434 aa9.26□□□□□ -0.93
CCDC196-203ENST00000411796 TAGLNQ01995 201 aaKnown RBP9.26□□□□□ -0.93
CCDC196-203ENST00000411796 PAK2Q13177 524 aa9.26□□□□□ -0.93
CCDC196-203ENST00000411796 LPIN1Q14693 890 aa9.26□□□□□ -0.93
CCDC196-203ENST00000411796 NOLC1Q14978 699 aaKnown RBP eCLIP9.26□□□□□ -0.93
CCDC196-203ENST00000411796 LRRC26Q2I0M4 334 aa9.26□□□□□ -0.93
CCDC196-203ENST00000411796 ZNF423Q2M1K9 1284 aa9.26□□□□□ -0.93
CCDC196-203ENST00000411796 FILIP1LQ4L180 1135 aa9.26□□□□□ -0.93
CCDC196-203ENST00000411796 ZC2HC1CQ53FD0 456 aaPredicted RBP9.26□□□□□ -0.93
CCDC196-203ENST00000411796 CDKAL1Q5VV42 579 aa9.26□□□□□ -0.93
CCDC196-203ENST00000411796 ARMCX5Q6P1M9 558 aa9.26□□□□□ -0.93
CCDC196-203ENST00000411796 IGF2-ASQ6U949 168 aa9.26□□□□□ -0.93
CCDC196-203ENST00000411796 FAM228AQ86W67 206 aa9.26□□□□□ -0.93
CCDC196-203ENST00000411796 CACTINQ8WUQ7 758 aaKnown RBP9.26□□□□□ -0.93
CCDC196-203ENST00000411796 TAF4BQ92750 862 aa9.26□□□□□ -0.93
CCDC196-203ENST00000411796 BICD1Q96G01 975 aa9.26□□□□□ -0.93
CCDC196-203ENST00000411796 SCLT1Q96NL6 688 aa9.26□□□□□ -0.93
CCDC196-203ENST00000411796 ACAP3Q96P50 834 aa9.26□□□□□ -0.93
CCDC196-203ENST00000411796 DUSP9Q99956 384 aaKnown RBP9.26□□□□□ -0.93
CCDC196-203ENST00000411796 CCDC94Q9BW85 323 aaPredicted RBP9.26□□□□□ -0.93
CCDC196-203ENST00000411796 TARS2Q9BW92 718 aaKnown RBP9.26□□□□□ -0.93
CCDC196-203ENST00000411796 SRRTQ9BXP5 876 aaKnown RBP9.26□□□□□ -0.93
CCDC196-203ENST00000411796 IFIH1Q9BYX4 1025 aaKnown RBP9.26□□□□□ -0.93
CCDC196-203ENST00000411796 MTIF3Q9H2K0 278 aaKnown RBP9.26□□□□□ -0.93
CCDC196-203ENST00000411796 MINDY3Q9H8M7 445 aa9.26□□□□□ -0.93
CCDC196-203ENST00000411796 KCNK4Q9NYG8 393 aa9.26□□□□□ -0.93
CCDC196-203ENST00000411796 HSPBP1Q9NZL4 362 aa9.26□□□□□ -0.93
CCDC196-203ENST00000411796 MAGEC2Q9UBF1 373 aaPredicted RBP9.26□□□□□ -0.93
CCDC196-203ENST00000411796 ARMCX3Q9UH62 379 aaPredicted RBP9.26□□□□□ -0.93
CCDC196-203ENST00000411796 LIMA1Q9UHB6 759 aaKnown RBP9.26□□□□□ -0.93
CCDC196-203ENST00000411796 CPSF3Q9UKF6 684 aaKnown RBP9.26□□□□□ -0.93
CCDC196-203ENST00000411796 NOC2LQ9Y3T9 749 aaKnown RBP9.26□□□□□ -0.93
CCDC196-203ENST00000411796 BIN1O00499 593 aa9.25□□□□□ -0.93
CCDC196-203ENST00000411796 DDX3YO15523 660 aaKnown RBP9.25□□□□□ -0.93
CCDC196-203ENST00000411796 CBFA2T2O43439 604 aa9.25□□□□□ -0.93
CCDC196-203ENST00000411796 FAM189A1O60320 539 aa9.25□□□□□ -0.93
CCDC196-203ENST00000411796 EXOC3O60645 756 aa9.25□□□□□ -0.93
CCDC196-203ENST00000411796 ZC3H11AO75152 810 aaKnown RBP eCLIP9.25□□□□□ -0.93
CCDC196-203ENST00000411796 KRT13P13646 458 aa9.25□□□□□ -0.93
CCDC196-203ENST00000411796 KCNE1P15382 129 aa9.25□□□□□ -0.93
CCDC196-203ENST00000411796 CDK11BP21127 795 aaKnown RBP9.25□□□□□ -0.93
CCDC196-203ENST00000411796 YARSP54577 528 aaKnown RBP9.25□□□□□ -0.93
CCDC196-203ENST00000411796 PSMD6Q15008 389 aa9.25□□□□□ -0.93
CCDC196-203ENST00000411796 ZBTB6Q15916 424 aa9.25□□□□□ -0.93
CCDC196-203ENST00000411796 TRIM60Q495X7 471 aa9.25□□□□□ -0.93
CCDC196-203ENST00000411796 TCP11X2Q5H9J9 407 aa9.25□□□□□ -0.93
CCDC196-203ENST00000411796 LRRC55Q6ZSA7 311 aa9.25□□□□□ -0.93
CCDC196-203ENST00000411796 DHX40Q8IX18 779 aaKnown RBP9.25□□□□□ -0.93
CCDC196-203ENST00000411796 TTC39CQ8N584 583 aa9.25□□□□□ -0.93
CCDC196-203ENST00000411796 KLHL23Q8NBE8 558 aa9.25□□□□□ -0.93
CCDC196-203ENST00000411796 PARD3BQ8TEW8 1205 aa9.25□□□□□ -0.93
CCDC196-203ENST00000411796 MED15Q96RN5 788 aa9.25□□□□□ -0.93
CCDC196-203ENST00000411796 EDEM3Q9BZQ6 932 aa9.25□□□□□ -0.93
CCDC196-203ENST00000411796 TRIM6Q9C030 488 aaPredicted RBP9.25□□□□□ -0.93
CCDC196-203ENST00000411796 CBX8Q9HC52 389 aa9.25□□□□□ -0.93
CCDC196-203ENST00000411796 IL23AQ9NPF7 189 aa9.25□□□□□ -0.93
CCDC196-203ENST00000411796 SLC38A7Q9NVC3 462 aa9.25□□□□□ -0.93
CCDC196-203ENST00000411796 TMEM161AQ9NX61 479 aa9.25□□□□□ -0.93
CCDC196-203ENST00000411796 FBXL5Q9UKA1 691 aa9.25□□□□□ -0.93
CCDC196-203ENST00000411796 COQ4Q9Y3A0 265 aa9.25□□□□□ -0.93
CCDC196-203ENST00000411796 NFE2L3Q9Y4A8 694 aa9.25□□□□□ -0.93
CCDC196-203ENST00000411796 DOCK5Q9H7D0 1870 aa9.25□□□□□ -0.93
CCDC196-203ENST00000411796 TTC28Q96AY4 2481 aa9.25□□□□□ -0.93
CCDC196-203ENST00000411796 MUC3AQ02505 3323 aa9.25□□□□□ -0.93
CCDC196-203ENST00000411796 A0A1W2PQC6 194 aa9.24□□□□□ -0.93
CCDC196-203ENST00000411796 TTC26A0AVF1 554 aa9.24□□□□□ -0.93
CCDC196-203ENST00000411796 FSD2A1L4K1 749 aa9.24□□□□□ -0.93
CCDC196-203ENST00000411796 C9IYK1 514 aa9.24□□□□□ -0.93
CCDC196-203ENST00000411796 ANKRD63C9JTQ0 380 aa9.24□□□□□ -0.93
CCDC196-203ENST00000411796 ATICP31939 592 aa9.24□□□□□ -0.93
CCDC196-203ENST00000411796 RPL9P32969 192 aaKnown RBP9.24□□□□□ -0.93
CCDC196-203ENST00000411796 CD68P34810 354 aaPredicted RBP9.24□□□□□ -0.93
CCDC196-203ENST00000411796 BMP8BP34820 402 aa9.24□□□□□ -0.93
CCDC196-203ENST00000411796 MRE11P49959 708 aa9.24□□□□□ -0.93
CCDC196-203ENST00000411796 CHMP4BP1P59074 171 aa9.24□□□□□ -0.93
CCDC196-203ENST00000411796 PCDH1Q08174 1060 aa9.24□□□□□ -0.93
CCDC196-203ENST00000411796 GPNMBQ14956 572 aa9.24□□□□□ -0.93
CCDC196-203ENST00000411796 SNRNP35Q16560 246 aaKnown RBP9.24□□□□□ -0.93
CCDC196-203ENST00000411796 DUOXA2Q1HG44 320 aa9.24□□□□□ -0.93
CCDC196-203ENST00000411796 FIGNQ5HY92 759 aa9.24□□□□□ -0.93
CCDC196-203ENST00000411796 PSRC1Q6PGN9 363 aaPredicted RBP9.24□□□□□ -0.93
CCDC196-203ENST00000411796 IRF2BP1Q8IU81 584 aa9.24□□□□□ -0.93
CCDC196-203ENST00000411796 WDR49Q8IV35 697 aa9.24□□□□□ -0.93
CCDC196-203ENST00000411796 BRSK2Q8IWQ3 736 aa9.24□□□□□ -0.93
CCDC196-203ENST00000411796 TRIM59Q8IWR1 403 aa9.24□□□□□ -0.93
CCDC196-203ENST00000411796 GPR65Q8IYL9 337 aa9.24□□□□□ -0.93
CCDC196-203ENST00000411796 SPATA18Q8TC71 538 aa9.24□□□□□ -0.93
CCDC196-203ENST00000411796 TMEM40Q8WWA1 233 aa9.24□□□□□ -0.93
CCDC196-203ENST00000411796 WNT8BQ93098 351 aa9.24□□□□□ -0.93
CCDC196-203ENST00000411796 TOP1MTQ969P6 601 aa9.24□□□□□ -0.93
CCDC196-203ENST00000411796 MSTO1Q9BUK6 570 aa9.24□□□□□ -0.93
CCDC196-203ENST00000411796 NUP58Q9BVL2 599 aa9.24□□□□□ -0.93
CCDC196-203ENST00000411796 CLEC4MQ9H2X3 399 aaPredicted RBP9.24□□□□□ -0.93
CCDC196-203ENST00000411796 PDZD7Q9H5P4 517 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms