RNA–Protein interactions for RNA: ENST00000411423.1

SF3A1-202, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 4

Gene SF3A1, Length 548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-202ENST00000411423 GABRDO14764 452 aa20.48■□□□□ 0.87
SF3A1-202ENST00000411423 EXOC3O60645 756 aa20.48■□□□□ 0.87
SF3A1-202ENST00000411423 MICAL2O94851 1124 aa20.48■□□□□ 0.87
SF3A1-202ENST00000411423 MYL1P05976 194 aa20.48■□□□□ 0.87
SF3A1-202ENST00000411423 HAPLN1P10915 354 aaPredicted RBP20.48■□□□□ 0.87
SF3A1-202ENST00000411423 NUCB2P80303 420 aa20.48■□□□□ 0.87
SF3A1-202ENST00000411423 MGAT5BQ3V5L5 792 aa20.48■□□□□ 0.87
SF3A1-202ENST00000411423 IQCEQ6IPM2 695 aa20.48■□□□□ 0.87
SF3A1-202ENST00000411423 GAREM2Q75VX8 874 aa20.48■□□□□ 0.87
SF3A1-202ENST00000411423 MTSS1LQ765P7 747 aa20.48■□□□□ 0.87
SF3A1-202ENST00000411423 DNAJB7Q7Z6W7 309 aaPredicted RBP20.48■□□□□ 0.87
SF3A1-202ENST00000411423 ELMOD1Q8N336 334 aa20.48■□□□□ 0.87
SF3A1-202ENST00000411423 TOP6BLQ8N6T0 577 aa20.48■□□□□ 0.87
SF3A1-202ENST00000411423 ELMO3Q96BJ8 720 aa20.48■□□□□ 0.87
SF3A1-202ENST00000411423 MKNK1Q9BUB5 465 aa20.48■□□□□ 0.87
SF3A1-202ENST00000411423 ASAH2Q9NR71 780 aa20.48■□□□□ 0.87
SF3A1-202ENST00000411423 ABI2Q9NYB9 513 aaPredicted RBP20.48■□□□□ 0.87
SF3A1-202ENST00000411423 CGNQ9P2M7 1197 aaKnown RBP20.48■□□□□ 0.87
SF3A1-202ENST00000411423 MAPK8IP1Q9UQF2 711 aa20.48■□□□□ 0.87
SF3A1-202ENST00000411423 MUC6Q6W4X9 2439 aa20.47■□□□□ 0.87
SF3A1-202ENST00000411423 A0A1W2PRU2 124 aa20.47■□□□□ 0.87
SF3A1-202ENST00000411423 LRRIQ3A6PVS8 624 aaPredicted RBP20.47■□□□□ 0.87
SF3A1-202ENST00000411423 ZNF197O14709 1029 aa20.47■□□□□ 0.87
SF3A1-202ENST00000411423 HUS1O60921 280 aa20.47■□□□□ 0.87
SF3A1-202ENST00000411423 TNNI1P19237 187 aa20.47■□□□□ 0.87
SF3A1-202ENST00000411423 LMO2P25791 158 aa20.47■□□□□ 0.87
SF3A1-202ENST00000411423 ALDH1A3P47895 512 aa20.47■□□□□ 0.87
SF3A1-202ENST00000411423 EPHB3P54753 998 aa20.47■□□□□ 0.87
SF3A1-202ENST00000411423 DLG4P78352 724 aa20.47■□□□□ 0.87
SF3A1-202ENST00000411423 SNW1Q13573 536 aaKnown RBP20.47■□□□□ 0.87
SF3A1-202ENST00000411423 INTS6LQ5JSJ4 861 aaKnown RBP20.47■□□□□ 0.87
SF3A1-202ENST00000411423 CYP4A22Q5TCH4 519 aa20.47■□□□□ 0.87
SF3A1-202ENST00000411423 ASTLQ6HA08 431 aaPredicted RBP20.47■□□□□ 0.87
SF3A1-202ENST00000411423 SLC9A9Q8IVB4 645 aa20.47■□□□□ 0.87
SF3A1-202ENST00000411423 ADGRF2Q8IZF7 708 aa20.47■□□□□ 0.87
SF3A1-202ENST00000411423 ENGASEQ8NFI3 743 aa20.47■□□□□ 0.87
SF3A1-202ENST00000411423 GIPC2Q8TF65 315 aa20.47■□□□□ 0.87
SF3A1-202ENST00000411423 PSMG2Q969U7 264 aa20.47■□□□□ 0.87
SF3A1-202ENST00000411423 FAM122AQ96E09 287 aa20.47■□□□□ 0.87
SF3A1-202ENST00000411423 ASB16Q96NS5 453 aa20.47■□□□□ 0.87
SF3A1-202ENST00000411423 IL21Q9HBE4 155 aa20.47■□□□□ 0.87
SF3A1-202ENST00000411423 HSFX1Q9UBD0 423 aa20.47■□□□□ 0.87
SF3A1-202ENST00000411423 ATP2C2O75185 946 aa20.46■□□□□ 0.87
SF3A1-202ENST00000411423 NR3C1P04150 777 aa20.46■□□□□ 0.87
SF3A1-202ENST00000411423 NHLH1Q02575 133 aa20.46■□□□□ 0.87
SF3A1-202ENST00000411423 PLD1Q13393 1074 aa20.46■□□□□ 0.87
SF3A1-202ENST00000411423 PNOCQ13519 176 aa20.46■□□□□ 0.87
SF3A1-202ENST00000411423 SDHAF4Q5VUM1 108 aa20.46■□□□□ 0.87
SF3A1-202ENST00000411423 TMEM86AQ8N2M4 240 aa20.46■□□□□ 0.87
SF3A1-202ENST00000411423 SPPL2BQ8TCT7 592 aa20.46■□□□□ 0.87
SF3A1-202ENST00000411423 PARD3BQ8TEW8 1205 aa20.46■□□□□ 0.87
SF3A1-202ENST00000411423 TMEM174Q8WUU8 243 aa20.46■□□□□ 0.87
SF3A1-202ENST00000411423 RSPRY1Q96DX4 576 aa20.46■□□□□ 0.87
SF3A1-202ENST00000411423 FNBP1Q96RU3 617 aa20.46■□□□□ 0.87
SF3A1-202ENST00000411423 PHOX2BQ99453 314 aa20.46■□□□□ 0.87
SF3A1-202ENST00000411423 ACBD6Q9BR61 282 aa20.46■□□□□ 0.87
SF3A1-202ENST00000411423 PI4K2AQ9BTU6 479 aa20.46■□□□□ 0.87
SF3A1-202ENST00000411423 KCNH6Q9H252 994 aa20.46■□□□□ 0.87
SF3A1-202ENST00000411423 MFSD1Q9H3U5 465 aa20.46■□□□□ 0.87
SF3A1-202ENST00000411423 GTF3C4Q9UKN8 822 aa20.46■□□□□ 0.87
SF3A1-202ENST00000411423 MYBPHLA2RUH7 354 aa20.45■□□□□ 0.86
SF3A1-202ENST00000411423 PDXKO00764 312 aa20.45■□□□□ 0.86
SF3A1-202ENST00000411423 ECI2O75521 394 aa20.45■□□□□ 0.86
SF3A1-202ENST00000411423 VIPR2P41587 438 aa20.45■□□□□ 0.86
SF3A1-202ENST00000411423 MYL6P60660 151 aa20.45■□□□□ 0.86
SF3A1-202ENST00000411423 C1orf220Q5T0J3 134 aa20.45■□□□□ 0.86
SF3A1-202ENST00000411423 TDRD10Q5VZ19 366 aaKnown RBP20.45■□□□□ 0.86
SF3A1-202ENST00000411423 GPIHBP1Q8IV16 184 aa20.45■□□□□ 0.86
SF3A1-202ENST00000411423 SMYD4Q8IYR2 804 aaPredicted RBP20.45■□□□□ 0.86
SF3A1-202ENST00000411423 DCP1BQ8IZD4 617 aaKnown RBP20.45■□□□□ 0.86
SF3A1-202ENST00000411423 C2orf15Q8WU43 125 aaKnown RBP20.45■□□□□ 0.86
SF3A1-202ENST00000411423 ERCC4Q92889 916 aaPredicted RBP20.45■□□□□ 0.86
SF3A1-202ENST00000411423 ELSPBP1Q96BH3 223 aa20.45■□□□□ 0.86
SF3A1-202ENST00000411423 MRPL45Q9BRJ2 306 aaKnown RBP20.45■□□□□ 0.86
SF3A1-202ENST00000411423 XYLT2Q9H1B5 865 aa20.45■□□□□ 0.86
SF3A1-202ENST00000411423 PCDHB5Q9Y5E4 795 aa20.45■□□□□ 0.86
SF3A1-202ENST00000411423 VNN1O95497 513 aa20.44■□□□□ 0.86
SF3A1-202ENST00000411423 AOC1P19801 751 aa20.44■□□□□ 0.86
SF3A1-202ENST00000411423 CYP2F1P24903 491 aa20.44■□□□□ 0.86
SF3A1-202ENST00000411423 TUFMP49411 452 aaKnown RBP20.44■□□□□ 0.86
SF3A1-202ENST00000411423 CLCN5P51795 746 aa20.44■□□□□ 0.86
SF3A1-202ENST00000411423 PSMC1P62191 440 aaKnown RBP20.44■□□□□ 0.86
SF3A1-202ENST00000411423 CLDN10P78369 228 aa20.44■□□□□ 0.86
SF3A1-202ENST00000411423 MYO1EQ12965 1108 aa20.44■□□□□ 0.86
SF3A1-202ENST00000411423 GRM2Q14416 872 aa20.44■□□□□ 0.86
SF3A1-202ENST00000411423 KCNB1Q14721 858 aa20.44■□□□□ 0.86
SF3A1-202ENST00000411423 VITQ6UXI7 678 aa20.44■□□□□ 0.86
SF3A1-202ENST00000411423 LEMD2Q8NC56 503 aa20.44■□□□□ 0.86
SF3A1-202ENST00000411423 GOLGA5Q8TBA6 731 aa20.44■□□□□ 0.86
SF3A1-202ENST00000411423 ZSCAN18Q8TBC5 510 aaPredicted RBP20.44■□□□□ 0.86
SF3A1-202ENST00000411423 TBC1D17Q9HA65 648 aa20.44■□□□□ 0.86
SF3A1-202ENST00000411423 CRTAC1Q9NQ79 661 aa20.44■□□□□ 0.86
SF3A1-202ENST00000411423 ARHGEF3Q9NR81 526 aa20.44■□□□□ 0.86
SF3A1-202ENST00000411423 TRAF3IP3Q9Y228 551 aa20.44■□□□□ 0.86
SF3A1-202ENST00000411423 ASB3Q9Y575 518 aa20.44■□□□□ 0.86
SF3A1-202ENST00000411423 COL4A2P08572 1712 aa20.44■□□□□ 0.86
SF3A1-202ENST00000411423 SHISA7A6NL88 538 aa20.43■□□□□ 0.86
SF3A1-202ENST00000411423 PRPF40AO75400 957 aaKnown RBP20.43■□□□□ 0.86
SF3A1-202ENST00000411423 C4BPAP04003 597 aaKnown RBP20.43■□□□□ 0.86
SF3A1-202ENST00000411423 HMGA1P17096 107 aaKnown RBP20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms