RNA–Protein interactions for RNA: ENST00000410940.1

RNU4-78P-201, Transcript of RNA, U4 small nuclear 78, pseudogene, humanhuman

BASIC

Gene RNU4-78P, Length 126 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-78P-201ENST00000410940 MATN4O95460 622 aa4.29□□□□□ -1.72
RNU4-78P-201ENST00000410940 SCGB1D1O95968 90 aa4.29□□□□□ -1.72
RNU4-78P-201ENST00000410940 NCAM1P13591 858 aa4.29□□□□□ -1.72
RNU4-78P-201ENST00000410940 HDCP19113 662 aa4.29□□□□□ -1.72
RNU4-78P-201ENST00000410940 GDNFP39905 211 aa4.29□□□□□ -1.72
RNU4-78P-201ENST00000410940 STAT1P42224 750 aa4.29□□□□□ -1.72
RNU4-78P-201ENST00000410940 ALDH18A1P54886 795 aaKnown RBP4.29□□□□□ -1.72
RNU4-78P-201ENST00000410940 DRG2P55039 364 aaKnown RBP4.29□□□□□ -1.72
RNU4-78P-201ENST00000410940 NR1H2P55055 460 aa4.29□□□□□ -1.72
RNU4-78P-201ENST00000410940 PRR5P85299 388 aa4.29□□□□□ -1.72
RNU4-78P-201ENST00000410940 CD83Q01151 205 aa4.29□□□□□ -1.72
RNU4-78P-201ENST00000410940 CALD1Q05682 793 aaKnown RBP4.29□□□□□ -1.72
RNU4-78P-201ENST00000410940 TAF11Q15544 211 aa4.29□□□□□ -1.72
RNU4-78P-201ENST00000410940 MEA1Q16626 185 aa4.29□□□□□ -1.72
RNU4-78P-201ENST00000410940 CR1LQ2VPA4 569 aa4.29□□□□□ -1.72
RNU4-78P-201ENST00000410940 ZNF792Q3KQV3 632 aa4.29□□□□□ -1.72
RNU4-78P-201ENST00000410940 WDR72Q3MJ13 1102 aa4.29□□□□□ -1.72
RNU4-78P-201ENST00000410940 SLC45A4Q5BKX6 768 aa4.29□□□□□ -1.72
RNU4-78P-201ENST00000410940 EEF1AKMT2Q5JPI9 291 aaKnown RBP4.29□□□□□ -1.72
RNU4-78P-201ENST00000410940 RALGPS1Q5JS13 557 aa4.29□□□□□ -1.72
RNU4-78P-201ENST00000410940 ACAD10Q6JQN1 1059 aa4.29□□□□□ -1.72
RNU4-78P-201ENST00000410940 ZC3H14Q6PJT7 736 aaKnown RBP4.29□□□□□ -1.72
RNU4-78P-201ENST00000410940 TMCO3Q6UWJ1 677 aa4.29□□□□□ -1.72
RNU4-78P-201ENST00000410940 KIAA0408Q6ZU52 694 aa4.29□□□□□ -1.72
RNU4-78P-201ENST00000410940 TTLL10Q6ZVT0 673 aa4.29□□□□□ -1.72
RNU4-78P-201ENST00000410940 OTOP2Q7RTS6 562 aa4.29□□□□□ -1.72
RNU4-78P-201ENST00000410940 ZNF572Q7Z3I7 529 aaPredicted RBP4.29□□□□□ -1.72
RNU4-78P-201ENST00000410940 TTC30AQ86WT1 665 aa4.29□□□□□ -1.72
RNU4-78P-201ENST00000410940 ARMC8Q8IUR7 673 aa4.29□□□□□ -1.72
RNU4-78P-201ENST00000410940 TDRD7Q8NHU6 1098 aaKnown RBP4.29□□□□□ -1.72
RNU4-78P-201ENST00000410940 STYXQ8WUJ0 223 aa4.29□□□□□ -1.72
RNU4-78P-201ENST00000410940 AFG1LQ8WV93 481 aa4.29□□□□□ -1.72
RNU4-78P-201ENST00000410940 WDR60Q8WVS4 1066 aa4.29□□□□□ -1.72
RNU4-78P-201ENST00000410940 NKD2Q969F2 451 aaPredicted RBP4.29□□□□□ -1.72
RNU4-78P-201ENST00000410940 SDF4Q9BRK5 362 aa4.29□□□□□ -1.72
RNU4-78P-201ENST00000410940 AP1M1Q9BXS5 423 aa4.29□□□□□ -1.72
RNU4-78P-201ENST00000410940 SH3GLB2Q9NR46 395 aa4.29□□□□□ -1.72
RNU4-78P-201ENST00000410940 ANKEF1Q9NU02 776 aa4.29□□□□□ -1.72
RNU4-78P-201ENST00000410940 ARGLU1Q9NWB6 273 aaPredicted RBP4.29□□□□□ -1.72
RNU4-78P-201ENST00000410940 IGSF9Q9P2J2 1179 aa4.29□□□□□ -1.72
RNU4-78P-201ENST00000410940 CFDP1Q9UEE9 299 aaPredicted RBP4.29□□□□□ -1.72
RNU4-78P-201ENST00000410940 RAPGEFL1Q9UHV5 662 aa4.29□□□□□ -1.72
RNU4-78P-201ENST00000410940 AJAP1Q9UKB5 411 aaPredicted RBP4.29□□□□□ -1.72
RNU4-78P-201ENST00000410940 SLC5A6Q9Y289 635 aa4.29□□□□□ -1.72
RNU4-78P-201ENST00000410940 DTNAQ9Y4J8 743 aa4.29□□□□□ -1.72
RNU4-78P-201ENST00000410940 AQP12BA6NM10 295 aa4.28□□□□□ -1.72
RNU4-78P-201ENST00000410940 B9A039 149 aa4.28□□□□□ -1.72
RNU4-78P-201ENST00000410940 IQCJ-SCHIP1C9J366 451 aaPredicted RBP4.28□□□□□ -1.72
RNU4-78P-201ENST00000410940 RBAK-RBAKDNI3L0D1 243 aa4.28□□□□□ -1.72
RNU4-78P-201ENST00000410940 HRKO00198 91 aa4.28□□□□□ -1.72
RNU4-78P-201ENST00000410940 DKC1O60832 514 aaKnown RBP eCLIP4.28□□□□□ -1.72
RNU4-78P-201ENST00000410940 GUCY1B2O75343 617 aa4.28□□□□□ -1.72
RNU4-78P-201ENST00000410940 SLC43A1O75387 559 aa4.28□□□□□ -1.72
RNU4-78P-201ENST00000410940 TSPAN9O75954 239 aa4.28□□□□□ -1.72
RNU4-78P-201ENST00000410940 NDST3O95803 873 aa4.28□□□□□ -1.72
RNU4-78P-201ENST00000410940 TFRCP02786 760 aaKnown RBP4.28□□□□□ -1.72
RNU4-78P-201ENST00000410940 CD1AP06126 327 aa4.28□□□□□ -1.72
RNU4-78P-201ENST00000410940 CNPP09543 421 aaKnown RBP4.28□□□□□ -1.72
RNU4-78P-201ENST00000410940 ZSCAN22P10073 491 aaPredicted RBP4.28□□□□□ -1.72
RNU4-78P-201ENST00000410940 ALAS1P13196 640 aa4.28□□□□□ -1.72
RNU4-78P-201ENST00000410940 ACVR2AP27037 513 aa4.28□□□□□ -1.72
RNU4-78P-201ENST00000410940 ARL1P40616 181 aaPredicted RBP4.28□□□□□ -1.72
RNU4-78P-201ENST00000410940 KRT83P78385 493 aa4.28□□□□□ -1.72
RNU4-78P-201ENST00000410940 EXOSC9Q06265 439 aaKnown RBP4.28□□□□□ -1.72
RNU4-78P-201ENST00000410940 CUL4AQ13619 759 aa4.28□□□□□ -1.72
RNU4-78P-201ENST00000410940 SLC12A1Q13621 1099 aa4.28□□□□□ -1.72
RNU4-78P-201ENST00000410940 ARHGEF7Q14155 803 aa4.28□□□□□ -1.72
RNU4-78P-201ENST00000410940 EIF4A2Q14240 407 aaKnown RBP4.28□□□□□ -1.72
RNU4-78P-201ENST00000410940 EIF4HQ15056 248 aaKnown RBP4.28□□□□□ -1.72
RNU4-78P-201ENST00000410940 DLGAP5Q15398 846 aa4.28□□□□□ -1.72
RNU4-78P-201ENST00000410940 TARBP2Q15633 366 aaKnown RBP4.28□□□□□ -1.72
RNU4-78P-201ENST00000410940 TRIM60Q495X7 471 aa4.28□□□□□ -1.72
RNU4-78P-201ENST00000410940 FAM47AQ5JRC9 791 aa4.28□□□□□ -1.72
RNU4-78P-201ENST00000410940 NFRKBQ6P4R8 1299 aa4.28□□□□□ -1.72
RNU4-78P-201ENST00000410940 SLC23A3Q6PIS1 610 aa4.28□□□□□ -1.72
RNU4-78P-201ENST00000410940 ATG4DQ86TL0 474 aaPredicted RBP4.28□□□□□ -1.72
RNU4-78P-201ENST00000410940 CCDC105Q8IYK2 499 aa4.28□□□□□ -1.72
RNU4-78P-201ENST00000410940 DNAJC5GQ8N7S2 189 aa4.28□□□□□ -1.72
RNU4-78P-201ENST00000410940 IPO4Q8TEX9 1081 aaKnown RBP4.28□□□□□ -1.72
RNU4-78P-201ENST00000410940 ST8SIA4Q92187 359 aa4.28□□□□□ -1.72
RNU4-78P-201ENST00000410940 NEIL1Q96FI4 390 aaPredicted RBP4.28□□□□□ -1.72
RNU4-78P-201ENST00000410940 ZNF668Q96K58 619 aaPredicted RBP4.28□□□□□ -1.72
RNU4-78P-201ENST00000410940 CLIC6Q96NY7 704 aa4.28□□□□□ -1.72
RNU4-78P-201ENST00000410940 BARD1Q99728 777 aaKnown RBP4.28□□□□□ -1.72
RNU4-78P-201ENST00000410940 PACSIN1Q9BY11 444 aa4.28□□□□□ -1.72
RNU4-78P-201ENST00000410940 CPEB1Q9BZB8 566 aaKnown RBP4.28□□□□□ -1.72
RNU4-78P-201ENST00000410940 PAIP1Q9H074 479 aaKnown RBP4.28□□□□□ -1.72
RNU4-78P-201ENST00000410940 TAF1DQ9H5J8 278 aaPredicted RBP4.28□□□□□ -1.72
RNU4-78P-201ENST00000410940 GPR35Q9HC97 309 aa4.28□□□□□ -1.72
RNU4-78P-201ENST00000410940 GJB4Q9NTQ9 266 aa4.28□□□□□ -1.72
RNU4-78P-201ENST00000410940 TBC1D23Q9NUY8 699 aa4.28□□□□□ -1.72
RNU4-78P-201ENST00000410940 SPATA6Q9NWH7 488 aaPredicted RBP4.28□□□□□ -1.72
RNU4-78P-201ENST00000410940 NDUFAF4Q9P032 175 aa4.28□□□□□ -1.72
RNU4-78P-201ENST00000410940 JKAMPQ9P055 326 aa4.28□□□□□ -1.72
RNU4-78P-201ENST00000410940 DNAI1Q9UI46 699 aa4.28□□□□□ -1.72
RNU4-78P-201ENST00000410940 GPR160Q9UJ42 338 aa4.28□□□□□ -1.72
RNU4-78P-201ENST00000410940 C19orf53Q9UNZ5 99 aaPredicted RBP4.28□□□□□ -1.72
RNU4-78P-201ENST00000410940 HS3ST4Q9Y661 456 aa4.28□□□□□ -1.72
RNU4-78P-201ENST00000410940 A0A1W2PPH5 198 aa4.27□□□□□ -1.73
RNU4-78P-201ENST00000410940 OR2W5A6NFC9 320 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms