RNA–Protein interactions for RNA: ENST00000410457.1

RNU2-28P-201, Transcript of RNA, U2 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU2-28P, Length 189 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-28P-201ENST00000410457 SLFN5Q08AF3 891 aa4.83□□□□□ -1.64
RNU2-28P-201ENST00000410457 ELAVL1Q15717 326 aaKnown RBP4.83□□□□□ -1.64
RNU2-28P-201ENST00000410457 PFKFB4Q16877 469 aa4.83□□□□□ -1.64
RNU2-28P-201ENST00000410457 LCE5AQ5TCM9 118 aa4.83□□□□□ -1.64
RNU2-28P-201ENST00000410457 FBXO38Q6PIJ6 1188 aa4.83□□□□□ -1.64
RNU2-28P-201ENST00000410457 TAX1BP1Q86VP1 789 aa4.83□□□□□ -1.64
RNU2-28P-201ENST00000410457 KRT73Q86Y46 540 aa4.83□□□□□ -1.64
RNU2-28P-201ENST00000410457 CCDC150Q8NCX0 1101 aa4.83□□□□□ -1.64
RNU2-28P-201ENST00000410457 FAM46DQ8NEK8 389 aa4.83□□□□□ -1.64
RNU2-28P-201ENST00000410457 TRAPPC12Q8WVT3 735 aa4.83□□□□□ -1.64
RNU2-28P-201ENST00000410457 TRIM63Q969Q1 353 aa4.83□□□□□ -1.64
RNU2-28P-201ENST00000410457 C18orf8Q96DM3 657 aa4.83□□□□□ -1.64
RNU2-28P-201ENST00000410457 TMEM176AQ96HP8 235 aa4.83□□□□□ -1.64
RNU2-28P-201ENST00000410457 PPP1R9BQ96SB3 815 aa4.83□□□□□ -1.64
RNU2-28P-201ENST00000410457 HEPHQ9BQS7 1158 aa4.83□□□□□ -1.64
RNU2-28P-201ENST00000410457 REXO4Q9GZR2 422 aaKnown RBP4.83□□□□□ -1.64
RNU2-28P-201ENST00000410457 POGKQ9P215 609 aa4.83□□□□□ -1.64
RNU2-28P-201ENST00000410457 MID2Q9UJV3 735 aa4.83□□□□□ -1.64
RNU2-28P-201ENST00000410457 CAPN11Q9UMQ6 739 aa4.83□□□□□ -1.64
RNU2-28P-201ENST00000410457 SH3BP1Q9Y3L3 701 aa4.83□□□□□ -1.64
RNU2-28P-201ENST00000410457 PCDHGB3Q9Y5G1 929 aa4.83□□□□□ -1.64
RNU2-28P-201ENST00000410457 A0A087WZ62 844 aa4.82□□□□□ -1.64
RNU2-28P-201ENST00000410457 FAM234BA2RU67 622 aa4.82□□□□□ -1.64
RNU2-28P-201ENST00000410457 PODXLO00592 558 aa4.82□□□□□ -1.64
RNU2-28P-201ENST00000410457 VEGFAP15692 232 aaPredicted RBP4.82□□□□□ -1.64
RNU2-28P-201ENST00000410457 BTF3P20290 206 aaKnown RBP4.82□□□□□ -1.64
RNU2-28P-201ENST00000410457 SERPINF1P36955 418 aa4.82□□□□□ -1.64
RNU2-28P-201ENST00000410457 CHN2P52757 468 aa4.82□□□□□ -1.64
RNU2-28P-201ENST00000410457 PPFIA1Q13136 1202 aa4.82□□□□□ -1.64
RNU2-28P-201ENST00000410457 PTK2BQ14289 1009 aa4.82□□□□□ -1.64
RNU2-28P-201ENST00000410457 SPARCL1Q14515 664 aa4.82□□□□□ -1.64
RNU2-28P-201ENST00000410457 SLC29A2Q14542 456 aa4.82□□□□□ -1.64
RNU2-28P-201ENST00000410457 RALBP1Q15311 655 aa4.82□□□□□ -1.64
RNU2-28P-201ENST00000410457 RAB30Q15771 203 aa4.82□□□□□ -1.64
RNU2-28P-201ENST00000410457 INSCQ1MX18 579 aa4.82□□□□□ -1.64
RNU2-28P-201ENST00000410457 ALFQ53S48 1182 aa4.82□□□□□ -1.64
RNU2-28P-201ENST00000410457 NOMO2Q5JPE7 1267 aa4.82□□□□□ -1.64
RNU2-28P-201ENST00000410457 ARL6IP4Q66PJ3 421 aaKnown RBP4.82□□□□□ -1.64
RNU2-28P-201ENST00000410457 NAIF1Q69YI7 327 aaPredicted RBP4.82□□□□□ -1.64
RNU2-28P-201ENST00000410457 HTR3DQ70Z44 454 aa4.82□□□□□ -1.64
RNU2-28P-201ENST00000410457 MED25Q71SY5 747 aa4.82□□□□□ -1.64
RNU2-28P-201ENST00000410457 ELOA2Q8IYF1 753 aaPredicted RBP4.82□□□□□ -1.64
RNU2-28P-201ENST00000410457 CFAP52Q8N1V2 620 aa4.82□□□□□ -1.64
RNU2-28P-201ENST00000410457 ANKRD35Q8N283 1001 aa4.82□□□□□ -1.64
RNU2-28P-201ENST00000410457 FAM71BQ8TC56 605 aa4.82□□□□□ -1.64
RNU2-28P-201ENST00000410457 MIEF2Q96C03 454 aa4.82□□□□□ -1.64
RNU2-28P-201ENST00000410457 GCC1Q96CN9 775 aa4.82□□□□□ -1.64
RNU2-28P-201ENST00000410457 LRRC46Q96FV0 321 aa4.82□□□□□ -1.64
RNU2-28P-201ENST00000410457 SNX27Q96L92 541 aa4.82□□□□□ -1.64
RNU2-28P-201ENST00000410457 OR14A2Q96R54 314 aa4.82□□□□□ -1.64
RNU2-28P-201ENST00000410457 MESP1Q9BRJ9 268 aa4.82□□□□□ -1.64
RNU2-28P-201ENST00000410457 OBP2BQ9NPH6 170 aa4.82□□□□□ -1.64
RNU2-28P-201ENST00000410457 HEYLQ9NQ87 328 aaPredicted RBP4.82□□□□□ -1.64
RNU2-28P-201ENST00000410457 ZSCAN32Q9NX65 697 aa4.82□□□□□ -1.64
RNU2-28P-201ENST00000410457 ETAA1Q9NY74 926 aa4.82□□□□□ -1.64
RNU2-28P-201ENST00000410457 DACT1Q9NYF0 836 aa4.82□□□□□ -1.64
RNU2-28P-201ENST00000410457 RGL1Q9NZL6 768 aa4.82□□□□□ -1.64
RNU2-28P-201ENST00000410457 ZNF69Q9UC07 566 aa4.82□□□□□ -1.64
RNU2-28P-201ENST00000410457 ANAPC4Q9UJX5 808 aa4.82□□□□□ -1.64
RNU2-28P-201ENST00000410457 HDAC9Q9UKV0 1011 aa4.82□□□□□ -1.64
RNU2-28P-201ENST00000410457 GPR52Q9Y2T5 361 aa4.82□□□□□ -1.64
RNU2-28P-201ENST00000410457 LGALS16A8MUM7 142 aa4.81□□□□□ -1.64
RNU2-28P-201ENST00000410457 POLRMTO00411 1230 aaKnown RBP4.81□□□□□ -1.64
RNU2-28P-201ENST00000410457 ACKR2O00590 384 aa4.81□□□□□ -1.64
RNU2-28P-201ENST00000410457 TRIM13O60858 407 aa4.81□□□□□ -1.64
RNU2-28P-201ENST00000410457 PRSS23O95084 383 aa4.81□□□□□ -1.64
RNU2-28P-201ENST00000410457 NDST3O95803 873 aa4.81□□□□□ -1.64
RNU2-28P-201ENST00000410457 ATXN1LP0C7T5 689 aaKnown RBP4.81□□□□□ -1.64
RNU2-28P-201ENST00000410457 FCER1AP12319 257 aa4.81□□□□□ -1.64
RNU2-28P-201ENST00000410457 CPT1AP50416 773 aa4.81□□□□□ -1.64
RNU2-28P-201ENST00000410457 SATB1Q01826 763 aa4.81□□□□□ -1.64
RNU2-28P-201ENST00000410457 ZNF844Q08AG5 666 aa4.81□□□□□ -1.64
RNU2-28P-201ENST00000410457 FOXL1Q12952 345 aa4.81□□□□□ -1.64
RNU2-28P-201ENST00000410457 ARHGEF7Q14155 803 aa4.81□□□□□ -1.64
RNU2-28P-201ENST00000410457 IQCB1Q15051 598 aa4.81□□□□□ -1.64
RNU2-28P-201ENST00000410457 AGAP9Q5VTM2 703 aa4.81□□□□□ -1.64
RNU2-28P-201ENST00000410457 RRAGBQ5VZM2 374 aa4.81□□□□□ -1.64
RNU2-28P-201ENST00000410457 SYT12Q8IV01 421 aa4.81□□□□□ -1.64
RNU2-28P-201ENST00000410457 ANKRD18AQ8IVF6 992 aa4.81□□□□□ -1.64
RNU2-28P-201ENST00000410457 RHOT2Q8IXI1 618 aa4.81□□□□□ -1.64
RNU2-28P-201ENST00000410457 D2HGDHQ8N465 521 aa4.81□□□□□ -1.64
RNU2-28P-201ENST00000410457 GLIS1Q8NBF1 620 aa4.81□□□□□ -1.64
RNU2-28P-201ENST00000410457 SMCR8Q8TEV9 937 aaPredicted RBP4.81□□□□□ -1.64
RNU2-28P-201ENST00000410457 PNKPQ96T60 521 aa4.81□□□□□ -1.64
RNU2-28P-201ENST00000410457 SMOQ99835 787 aa4.81□□□□□ -1.64
RNU2-28P-201ENST00000410457 TLR10Q9BXR5 811 aa4.81□□□□□ -1.64
RNU2-28P-201ENST00000410457 MAGEH1Q9H213 219 aa4.81□□□□□ -1.64
RNU2-28P-201ENST00000410457 FAM83DQ9H4H8 585 aa4.81□□□□□ -1.64
RNU2-28P-201ENST00000410457 TBC1D23Q9NUY8 699 aa4.81□□□□□ -1.64
RNU2-28P-201ENST00000410457 SHOC2Q9UQ13 582 aa4.81□□□□□ -1.64
RNU2-28P-201ENST00000410457 ADAMTS20P59510 1910 aa4.8□□□□□ -1.64
RNU2-28P-201ENST00000410457 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.8□□□□□ -1.64
RNU2-28P-201ENST00000410457 AQP7P3A6NL99 342 aa4.8□□□□□ -1.64
RNU2-28P-201ENST00000410457 ITGA5P08648 1049 aa4.8□□□□□ -1.64
RNU2-28P-201ENST00000410457 DHRS4L1P0CG22 281 aa4.8□□□□□ -1.64
RNU2-28P-201ENST00000410457 EGR1P18146 543 aa4.8□□□□□ -1.64
RNU2-28P-201ENST00000410457 MSX2P35548 267 aaPredicted RBP4.8□□□□□ -1.64
RNU2-28P-201ENST00000410457 TOB1P50616 345 aaPredicted RBP4.8□□□□□ -1.64
RNU2-28P-201ENST00000410457 PRKG1Q13976 671 aa4.8□□□□□ -1.64
RNU2-28P-201ENST00000410457 NPY5RQ15761 445 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms