RNA–Protein interactions for RNA: ENST00000410080.5

PRPF40A-202, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PRPF40A, Length 8,048 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-202ENST00000410080 PRCPP42785 496 aa11.71□□□□□ -0.53
PRPF40A-202ENST00000410080 TXNRD1Q16881 649 aa11.71□□□□□ -0.53
PRPF40A-202ENST00000410080 ANO5Q75V66 913 aa11.71□□□□□ -0.53
PRPF40A-202ENST00000410080 OXCT2Q9BYC2 517 aaPredicted RBP11.71□□□□□ -0.53
PRPF40A-202ENST00000410080 DCP1AQ9NPI6 582 aaPredicted RBP11.71□□□□□ -0.53
PRPF40A-202ENST00000410080 STXBP3O00186 592 aa11.71□□□□□ -0.53
PRPF40A-202ENST00000410080 CYP26A1O43174 497 aa11.71□□□□□ -0.53
PRPF40A-202ENST00000410080 TEX33O43247 280 aa11.71□□□□□ -0.53
PRPF40A-202ENST00000410080 CSNK2BP67870 215 aa11.71□□□□□ -0.53
PRPF40A-202ENST00000410080 ENGASEQ8NFI3 743 aa11.71□□□□□ -0.53
PRPF40A-202ENST00000410080 TNIP2Q8NFZ5 429 aa11.71□□□□□ -0.53
PRPF40A-202ENST00000410080 EPN3Q9H201 632 aa11.71□□□□□ -0.53
PRPF40A-202ENST00000410080 WDCPQ9H6R7 721 aa11.71□□□□□ -0.53
PRPF40A-202ENST00000410080 H7C4K7 107 aa11.71□□□□□ -0.53
PRPF40A-202ENST00000410080 FGFR2P21802 821 aa11.71□□□□□ -0.53
PRPF40A-202ENST00000410080 FLT3P36888 993 aa11.71□□□□□ -0.53
PRPF40A-202ENST00000410080 RGS2P41220 211 aa11.71□□□□□ -0.53
PRPF40A-202ENST00000410080 TMEM154Q6P9G4 183 aa11.71□□□□□ -0.53
PRPF40A-202ENST00000410080 DDI1Q8WTU0 396 aa11.71□□□□□ -0.53
PRPF40A-202ENST00000410080 TSC22D3Q99576 134 aa11.71□□□□□ -0.53
PRPF40A-202ENST00000410080 COLEC11Q9BWP8 271 aa11.71□□□□□ -0.53
PRPF40A-202ENST00000410080 NPHS2Q9NP85 383 aa11.71□□□□□ -0.53
PRPF40A-202ENST00000410080 THG1LQ9NWX6 298 aaKnown RBP11.71□□□□□ -0.53
PRPF40A-202ENST00000410080 TARBP1Q13395 1621 aaKnown RBP11.71□□□□□ -0.53
PRPF40A-202ENST00000410080 KRT33AO76009 404 aa11.71□□□□□ -0.54
PRPF40A-202ENST00000410080 URODP06132 367 aa11.71□□□□□ -0.54
PRPF40A-202ENST00000410080 TRIM49P0CI25 452 aa11.71□□□□□ -0.54
PRPF40A-202ENST00000410080 TRIM49CP0CI26 452 aa11.71□□□□□ -0.54
PRPF40A-202ENST00000410080 PLA2G4AP47712 749 aa11.71□□□□□ -0.54
PRPF40A-202ENST00000410080 NCOA4Q13772 614 aa11.71□□□□□ -0.54
PRPF40A-202ENST00000410080 STARD3Q14849 445 aa11.71□□□□□ -0.54
PRPF40A-202ENST00000410080 PODNQ7Z5L7 613 aa11.71□□□□□ -0.54
PRPF40A-202ENST00000410080 LDHDQ86WU2 507 aa11.71□□□□□ -0.54
PRPF40A-202ENST00000410080 ADI1Q9BV57 179 aa11.71□□□□□ -0.54
PRPF40A-202ENST00000410080 INTS2Q9H0H0 1204 aaKnown RBP11.71□□□□□ -0.54
PRPF40A-202ENST00000410080 EXOSC4Q9NPD3 245 aaKnown RBP11.71□□□□□ -0.54
PRPF40A-202ENST00000410080 FBXO2Q9UK22 296 aaPredicted RBP11.71□□□□□ -0.54
PRPF40A-202ENST00000410080 PEX1O43933 1283 aa11.71□□□□□ -0.54
PRPF40A-202ENST00000410080 DGKIO75912 1065 aa11.71□□□□□ -0.54
PRPF40A-202ENST00000410080 FAM200BP0CF97 657 aa11.71□□□□□ -0.54
PRPF40A-202ENST00000410080 ATP1A3P13637 1013 aa11.71□□□□□ -0.54
PRPF40A-202ENST00000410080 EFNA5P52803 228 aa11.71□□□□□ -0.54
PRPF40A-202ENST00000410080 TRADDQ15628 312 aa11.71□□□□□ -0.54
PRPF40A-202ENST00000410080 GLRA4Q5JXX5 417 aa11.71□□□□□ -0.54
PRPF40A-202ENST00000410080 POMGNT2Q8NAT1 580 aa11.71□□□□□ -0.54
PRPF40A-202ENST00000410080 IPCEF1Q8WWN9 437 aaPredicted RBP11.71□□□□□ -0.54
PRPF40A-202ENST00000410080 FAM96AQ9H5X1 160 aa11.71□□□□□ -0.54
PRPF40A-202ENST00000410080 C2orf81A6NN90 581 aa11.7□□□□□ -0.54
PRPF40A-202ENST00000410080 EVPLLA8MZ36 301 aa11.7□□□□□ -0.54
PRPF40A-202ENST00000410080 TDP2O95551 362 aa11.7□□□□□ -0.54
PRPF40A-202ENST00000410080 PTPN7P35236 360 aa11.7□□□□□ -0.54
PRPF40A-202ENST00000410080 SLC11A2P49281 568 aa11.7□□□□□ -0.54
PRPF40A-202ENST00000410080 TOB2Q14106 344 aaPredicted RBP11.7□□□□□ -0.54
PRPF40A-202ENST00000410080 DHX40Q8IX18 779 aaKnown RBP11.7□□□□□ -0.54
PRPF40A-202ENST00000410080 WNK4Q96J92 1243 aa11.7□□□□□ -0.54
PRPF40A-202ENST00000410080 CHST12Q9NRB3 414 aa11.7□□□□□ -0.54
PRPF40A-202ENST00000410080 IMPAD1Q9NX62 359 aa11.7□□□□□ -0.54
PRPF40A-202ENST00000410080 HDAC6Q9UBN7 1215 aa11.7□□□□□ -0.54
PRPF40A-202ENST00000410080 STAU1O95793 577 aaKnown RBP11.7□□□□□ -0.54
PRPF40A-202ENST00000410080 CDC27P30260 824 aa11.7□□□□□ -0.54
PRPF40A-202ENST00000410080 SGCGQ13326 291 aa11.7□□□□□ -0.54
PRPF40A-202ENST00000410080 LLGL2Q6P1M3 1020 aa11.7□□□□□ -0.54
PRPF40A-202ENST00000410080 BBS7Q8IWZ6 715 aa11.7□□□□□ -0.54
PRPF40A-202ENST00000410080 ZSCAN18Q8TBC5 510 aaPredicted RBP11.7□□□□□ -0.54
PRPF40A-202ENST00000410080 GID8Q9NWU2 228 aa11.7□□□□□ -0.54
PRPF40A-202ENST00000410080 MARCOQ9UEW3 520 aaPredicted RBP11.7□□□□□ -0.54
PRPF40A-202ENST00000410080 DAB1O75553 588 aa11.7□□□□□ -0.54
PRPF40A-202ENST00000410080 MLH1P40692 756 aa11.7□□□□□ -0.54
PRPF40A-202ENST00000410080 QRICH1Q2TAL8 776 aa11.7□□□□□ -0.54
PRPF40A-202ENST00000410080 FBXO32Q969P5 355 aa11.7□□□□□ -0.54
PRPF40A-202ENST00000410080 POLR1DQ9Y2S0 133 aa11.7□□□□□ -0.54
PRPF40A-202ENST00000410080 TNS3Q68CZ2 1445 aa11.7□□□□□ -0.54
PRPF40A-202ENST00000410080 AP3B1O00203 1094 aa11.7□□□□□ -0.54
PRPF40A-202ENST00000410080 CYP2C9P11712 490 aa11.7□□□□□ -0.54
PRPF40A-202ENST00000410080 CDH2P19022 906 aaPredicted RBP11.7□□□□□ -0.54
PRPF40A-202ENST00000410080 ATP12AP54707 1039 aa11.7□□□□□ -0.54
PRPF40A-202ENST00000410080 GJC2Q5T442 439 aaPredicted RBP11.7□□□□□ -0.54
PRPF40A-202ENST00000410080 IZUMO3Q5VZ72 239 aa11.7□□□□□ -0.54
PRPF40A-202ENST00000410080 MTERF3Q96E29 417 aa11.7□□□□□ -0.54
PRPF40A-202ENST00000410080 NSMCE4AQ9NXX6 385 aa11.7□□□□□ -0.54
PRPF40A-202ENST00000410080 PCDHB9Q9Y5E1 797 aa11.7□□□□□ -0.54
PRPF40A-202ENST00000410080 CHURC1-FNTBB4DL54 471 aa11.7□□□□□ -0.54
PRPF40A-202ENST00000410080 IGKV5-2P06315 115 aa11.7□□□□□ -0.54
PRPF40A-202ENST00000410080 RAG1P15918 1043 aa11.7□□□□□ -0.54
PRPF40A-202ENST00000410080 PCSK1P29120 753 aa11.7□□□□□ -0.54
PRPF40A-202ENST00000410080 EPHB3P54753 998 aa11.7□□□□□ -0.54
PRPF40A-202ENST00000410080 SIRT2Q8IXJ6 389 aa11.7□□□□□ -0.54
PRPF40A-202ENST00000410080 PROM2Q8N271 834 aa11.7□□□□□ -0.54
PRPF40A-202ENST00000410080 PRMT1Q99873 361 aaKnown RBP11.7□□□□□ -0.54
PRPF40A-202ENST00000410080 TMEM39AQ9NV64 488 aa11.7□□□□□ -0.54
PRPF40A-202ENST00000410080 MPP6Q9NZW5 540 aa11.7□□□□□ -0.54
PRPF40A-202ENST00000410080 PMPCBO75439 489 aa11.7□□□□□ -0.54
PRPF40A-202ENST00000410080 AKR1B1P15121 316 aa11.7□□□□□ -0.54
PRPF40A-202ENST00000410080 MTM1Q13496 603 aa11.7□□□□□ -0.54
PRPF40A-202ENST00000410080 GRM4Q14833 912 aa11.7□□□□□ -0.54
PRPF40A-202ENST00000410080 NFIXQ14938 502 aa11.7□□□□□ -0.54
PRPF40A-202ENST00000410080 SPIRE2Q8WWL2 714 aa11.7□□□□□ -0.54
PRPF40A-202ENST00000410080 SKA1Q96BD8 255 aa11.7□□□□□ -0.54
PRPF40A-202ENST00000410080 CPB2Q96IY4 423 aa11.7□□□□□ -0.54
PRPF40A-202ENST00000410080 FAM20AQ96MK3 541 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms