RNA–Protein interactions for RNA: ENST00000409860.1

C4orf48-202, Transcript of chromosome 4 open reading frame 48, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C4orf48, Length 477 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf48-202ENST00000409860 SYT15Q9BQS2 421 aa22.01■■□□□ 1.11
C4orf48-202ENST00000409860 PCDHB4Q9Y5E5 795 aa22.01■■□□□ 1.11
C4orf48-202ENST00000409860 COL4A4P53420 1690 aaPredicted RBP22.01■■□□□ 1.11
C4orf48-202ENST00000409860 CHD9Q3L8U1 2897 aa22■■□□□ 1.11
C4orf48-202ENST00000409860 CNPP09543 421 aaKnown RBP22■■□□□ 1.11
C4orf48-202ENST00000409860 CPB1P15086 417 aa22■■□□□ 1.11
C4orf48-202ENST00000409860 LMO2P25791 158 aa22■■□□□ 1.11
C4orf48-202ENST00000409860 OR1D2P34982 312 aa22■■□□□ 1.11
C4orf48-202ENST00000409860 PBX1P40424 430 aa22■■□□□ 1.11
C4orf48-202ENST00000409860 ARPP19P56211 112 aa22■■□□□ 1.11
C4orf48-202ENST00000409860 POLR2FP61218 127 aaKnown RBP22■■□□□ 1.11
C4orf48-202ENST00000409860 INTS6LQ5JSJ4 861 aaKnown RBP22■■□□□ 1.11
C4orf48-202ENST00000409860 SMYD5Q6GMV2 418 aa22■■□□□ 1.11
C4orf48-202ENST00000409860 SLC8B1Q6J4K2 584 aa22■■□□□ 1.11
C4orf48-202ENST00000409860 DCP1BQ8IZD4 617 aaKnown RBP22■■□□□ 1.11
C4orf48-202ENST00000409860 UBR7Q8N806 425 aa22■■□□□ 1.11
C4orf48-202ENST00000409860 CLSTN3Q9BQT9 956 aa22■■□□□ 1.11
C4orf48-202ENST00000409860 NT5C1AQ9BXI3 368 aa22■■□□□ 1.11
C4orf48-202ENST00000409860 ZCWPW1Q9H0M4 648 aa22■■□□□ 1.11
C4orf48-202ENST00000409860 NSUN3Q9H649 340 aaKnown RBP22■■□□□ 1.11
C4orf48-202ENST00000409860 EPHB6O15197 1021 aa21.99■■□□□ 1.11
C4orf48-202ENST00000409860 AP5Z1O43299 807 aa21.99■■□□□ 1.11
C4orf48-202ENST00000409860 HCRTO43612 131 aa21.99■■□□□ 1.11
C4orf48-202ENST00000409860 NOL4O94818 638 aa21.99■■□□□ 1.11
C4orf48-202ENST00000409860 ACO1P21399 889 aaKnown RBP21.99■■□□□ 1.11
C4orf48-202ENST00000409860 IGFBP4P22692 258 aa21.99■■□□□ 1.11
C4orf48-202ENST00000409860 KLRC2P26717 231 aa21.99■■□□□ 1.11
C4orf48-202ENST00000409860 TMEM270Q6UE05 265 aa21.99■■□□□ 1.11
C4orf48-202ENST00000409860 RSPO2Q6UXX9 243 aaPredicted RBP21.99■■□□□ 1.11
C4orf48-202ENST00000409860 Q7L0L9 218 aa21.99■■□□□ 1.11
C4orf48-202ENST00000409860 GLYCTKQ8IVS8 523 aa21.99■■□□□ 1.11
C4orf48-202ENST00000409860 DEFB123Q8N688 67 aa21.99■■□□□ 1.11
C4orf48-202ENST00000409860 IQCDQ96DY2 449 aa21.99■■□□□ 1.11
C4orf48-202ENST00000409860 NUP58Q9BVL2 599 aa21.99■■□□□ 1.11
C4orf48-202ENST00000409860 NAA15Q9BXJ9 866 aaKnown RBP21.99■■□□□ 1.11
C4orf48-202ENST00000409860 STK33Q9BYT3 514 aa21.99■■□□□ 1.11
C4orf48-202ENST00000409860 CEP72Q9P209 647 aa21.99■■□□□ 1.11
C4orf48-202ENST00000409860 HMGXB4Q9UGU5 601 aa21.99■■□□□ 1.11
C4orf48-202ENST00000409860 AJAP1Q9UKB5 411 aaPredicted RBP21.99■■□□□ 1.11
C4orf48-202ENST00000409860 VWA8A3KMH1 1905 aa21.99■■□□□ 1.11
C4orf48-202ENST00000409860 ITIH6Q6UXX5 1313 aa21.99■■□□□ 1.11
C4orf48-202ENST00000409860 TSC2P49815 1807 aa21.99■■□□□ 1.11
C4orf48-202ENST00000409860 ADAM12O43184 909 aa21.98■■□□□ 1.11
C4orf48-202ENST00000409860 OR4Q2P0C623 313 aa21.98■■□□□ 1.11
C4orf48-202ENST00000409860 KRT5P13647 590 aa21.98■■□□□ 1.11
C4orf48-202ENST00000409860 POU3F3P20264 500 aaPredicted RBP21.98■■□□□ 1.11
C4orf48-202ENST00000409860 ZNF75DP51815 510 aa21.98■■□□□ 1.11
C4orf48-202ENST00000409860 PSMC1P62191 440 aaKnown RBP21.98■■□□□ 1.11
C4orf48-202ENST00000409860 ROR1Q01973 937 aa21.98■■□□□ 1.11
C4orf48-202ENST00000409860 RAB33AQ14088 237 aa21.98■■□□□ 1.11
C4orf48-202ENST00000409860 ADGRE1Q14246 886 aa21.98■■□□□ 1.11
C4orf48-202ENST00000409860 DRAP1Q14919 205 aaPredicted RBP21.98■■□□□ 1.11
C4orf48-202ENST00000409860 MAPRE1Q15691 268 aaKnown RBP21.98■■□□□ 1.11
C4orf48-202ENST00000409860 ZNF394Q53GI3 561 aa21.98■■□□□ 1.11
C4orf48-202ENST00000409860 CACNA2D4Q7Z3S7 1137 aa21.98■■□□□ 1.11
C4orf48-202ENST00000409860 PPFIBP1Q86W92 1011 aa21.98■■□□□ 1.11
C4orf48-202ENST00000409860 WHAMMQ8TF30 809 aa21.98■■□□□ 1.11
C4orf48-202ENST00000409860 SHC3Q92529 594 aa21.98■■□□□ 1.11
C4orf48-202ENST00000409860 SPAG5Q96R06 1193 aa21.98■■□□□ 1.11
C4orf48-202ENST00000409860 TMEM209Q96SK2 561 aa21.98■■□□□ 1.11
C4orf48-202ENST00000409860 CDCA3Q99618 268 aaPredicted RBP21.98■■□□□ 1.11
C4orf48-202ENST00000409860 ELOVL4Q9GZR5 314 aa21.98■■□□□ 1.11
C4orf48-202ENST00000409860 DPEP3Q9H4B8 488 aa21.98■■□□□ 1.11
C4orf48-202ENST00000409860 TLE6Q9H808 572 aa21.98■■□□□ 1.11
C4orf48-202ENST00000409860 NLRC4Q9NPP4 1024 aa21.98■■□□□ 1.11
C4orf48-202ENST00000409860 NME7Q9Y5B8 376 aa21.98■■□□□ 1.11
C4orf48-202ENST00000409860 MTCH2Q9Y6C9 303 aa21.98■■□□□ 1.11
C4orf48-202ENST00000409860 PTPN1P18031 435 aaKnown RBP21.97■■□□□ 1.11
C4orf48-202ENST00000409860 USP8P40818 1118 aa21.97■■□□□ 1.11
C4orf48-202ENST00000409860 SMARCB1Q12824 385 aa21.97■■□□□ 1.11
C4orf48-202ENST00000409860 ORC1Q13415 861 aa21.97■■□□□ 1.11
C4orf48-202ENST00000409860 NFE2Q16621 373 aaPredicted RBP21.97■■□□□ 1.11
C4orf48-202ENST00000409860 SLC39A12Q504Y0 691 aa21.97■■□□□ 1.11
C4orf48-202ENST00000409860 FIGNQ5HY92 759 aa21.97■■□□□ 1.11
C4orf48-202ENST00000409860 ADGRD2Q7Z7M1 963 aa21.97■■□□□ 1.11
C4orf48-202ENST00000409860 ACOT1Q86TX2 421 aa21.97■■□□□ 1.11
C4orf48-202ENST00000409860 VSTM4Q8IW00 320 aa21.97■■□□□ 1.11
C4orf48-202ENST00000409860 RBBP8NLQ8NC74 664 aaPredicted RBP21.97■■□□□ 1.11
C4orf48-202ENST00000409860 B3GALNT2Q8NCR0 500 aa21.97■■□□□ 1.11
C4orf48-202ENST00000409860 TMEM176AQ96HP8 235 aa21.97■■□□□ 1.11
C4orf48-202ENST00000409860 MRFAP1L1Q96HT8 127 aa21.97■■□□□ 1.11
C4orf48-202ENST00000409860 TWNKQ96RR1 684 aa21.97■■□□□ 1.11
C4orf48-202ENST00000409860 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP21.97■■□□□ 1.11
C4orf48-202ENST00000409860 FSD2A1L4K1 749 aa21.96■■□□□ 1.11
C4orf48-202ENST00000409860 CLASP2O75122 1294 aaKnown RBP21.96■■□□□ 1.11
C4orf48-202ENST00000409860 GLUD1P00367 558 aa21.96■■□□□ 1.11
C4orf48-202ENST00000409860 NRIP1P48552 1158 aa21.96■■□□□ 1.11
C4orf48-202ENST00000409860 RAD23BP54727 409 aa21.96■■□□□ 1.11
C4orf48-202ENST00000409860 GPR17Q13304 367 aa21.96■■□□□ 1.11
C4orf48-202ENST00000409860 DUSP6Q16828 381 aa21.96■■□□□ 1.11
C4orf48-202ENST00000409860 MDH1BQ5I0G3 518 aa21.96■■□□□ 1.11
C4orf48-202ENST00000409860 TPGS2Q68CL5 300 aa21.96■■□□□ 1.11
C4orf48-202ENST00000409860 SPECC1LQ69YQ0 1117 aa21.96■■□□□ 1.11
C4orf48-202ENST00000409860 RBM23Q86U06 439 aaKnown RBP21.96■■□□□ 1.11
C4orf48-202ENST00000409860 CRYBG2Q8N1P7 616 aa21.96■■□□□ 1.11
C4orf48-202ENST00000409860 CDX2Q99626 313 aaPredicted RBP21.96■■□□□ 1.11
C4orf48-202ENST00000409860 EDEM3Q9BZQ6 932 aa21.96■■□□□ 1.11
C4orf48-202ENST00000409860 GRPEL1Q9HAV7 217 aa21.96■■□□□ 1.11
C4orf48-202ENST00000409860 CRTAC1Q9NQ79 661 aa21.96■■□□□ 1.11
C4orf48-202ENST00000409860 CNTN6Q9UQ52 1028 aa21.96■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms