RNA–Protein interactions for RNA: ENST00000409776.6

RGPD1-202, Transcript of RANBP2-like and GRIP domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RGPD1, Length 6,692 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD1-202ENST00000409776 RRM2BQ7LG56 351 aa4.28□□□□□ -1.72
RGPD1-202ENST00000409776 DQX1Q8TE96 717 aaKnown RBP4.28□□□□□ -1.72
RGPD1-202ENST00000409776 SNX19Q92543 992 aa4.28□□□□□ -1.72
RGPD1-202ENST00000409776 ECHDC3Q96DC8 303 aa4.28□□□□□ -1.72
RGPD1-202ENST00000409776 PTCD3Q96EY7 689 aaKnown RBP4.28□□□□□ -1.72
RGPD1-202ENST00000409776 SGSM3Q96HU1 749 aa4.28□□□□□ -1.72
RGPD1-202ENST00000409776 PRAM1Q96QH2 718 aa4.28□□□□□ -1.72
RGPD1-202ENST00000409776 CIPCQ9C0C6 399 aa4.28□□□□□ -1.72
RGPD1-202ENST00000409776 CCSER1Q9C0I3 900 aa4.28□□□□□ -1.72
RGPD1-202ENST00000409776 PLEKHA4Q9H4M7 779 aa4.28□□□□□ -1.72
RGPD1-202ENST00000409776 POLR3BQ9NW08 1133 aaPredicted RBP4.28□□□□□ -1.72
RGPD1-202ENST00000409776 IMPAD1Q9NX62 359 aa4.28□□□□□ -1.72
RGPD1-202ENST00000409776 ZNF180Q9UJW8 692 aa4.28□□□□□ -1.72
RGPD1-202ENST00000409776 HSPB11Q9Y547 144 aa4.28□□□□□ -1.72
RGPD1-202ENST00000409776 PCDHGA8Q9Y5G5 932 aa4.28□□□□□ -1.72
RGPD1-202ENST00000409776 GJA3Q9Y6H8 435 aa4.28□□□□□ -1.72
RGPD1-202ENST00000409776 GSAPA4D1B5 854 aa4.27□□□□□ -1.73
RGPD1-202ENST00000409776 PI4K2BG5E9Z4 385 aa4.27□□□□□ -1.73
RGPD1-202ENST00000409776 H0Y8G0 127 aa4.27□□□□□ -1.73
RGPD1-202ENST00000409776 PDHXO00330 501 aa4.27□□□□□ -1.73
RGPD1-202ENST00000409776 GGPS1O95749 300 aa4.27□□□□□ -1.73
RGPD1-202ENST00000409776 CD2P06729 351 aa4.27□□□□□ -1.73
RGPD1-202ENST00000409776 GNAO1P09471 354 aa4.27□□□□□ -1.73
RGPD1-202ENST00000409776 IFIT1P09914 478 aaKnown RBP4.27□□□□□ -1.73
RGPD1-202ENST00000409776 OR3A3P47888 321 aa4.27□□□□□ -1.73
RGPD1-202ENST00000409776 OR3A2P47893 321 aa4.27□□□□□ -1.73
RGPD1-202ENST00000409776 TFAMQ00059 246 aaKnown RBP4.27□□□□□ -1.73
RGPD1-202ENST00000409776 BTKQ06187 659 aa4.27□□□□□ -1.73
RGPD1-202ENST00000409776 SMU1Q2TAY7 513 aa4.27□□□□□ -1.73
RGPD1-202ENST00000409776 KLHL40Q2TBA0 621 aa4.27□□□□□ -1.73
RGPD1-202ENST00000409776 FAM102BQ5T8I3 360 aa4.27□□□□□ -1.73
RGPD1-202ENST00000409776 SPOPLQ6IQ16 392 aa4.27□□□□□ -1.73
RGPD1-202ENST00000409776 CDC73Q6P1J9 531 aa4.27□□□□□ -1.73
RGPD1-202ENST00000409776 C16orf89Q6UX73 402 aa4.27□□□□□ -1.73
RGPD1-202ENST00000409776 ISLR2Q6UXK2 745 aa4.27□□□□□ -1.73
RGPD1-202ENST00000409776 SLC13A5Q86YT5 568 aaPredicted RBP4.27□□□□□ -1.73
RGPD1-202ENST00000409776 ZGPATQ8N5A5 531 aaKnown RBP4.27□□□□□ -1.73
RGPD1-202ENST00000409776 PI4K2BQ8TCG2 481 aa4.27□□□□□ -1.73
RGPD1-202ENST00000409776 TANKQ92844 425 aa4.27□□□□□ -1.73
RGPD1-202ENST00000409776 CCT8L2Q96SF2 557 aa4.27□□□□□ -1.73
RGPD1-202ENST00000409776 EMILIN2Q9BXX0 1053 aa4.27□□□□□ -1.73
RGPD1-202ENST00000409776 ZNF350Q9GZX5 532 aa4.27□□□□□ -1.73
RGPD1-202ENST00000409776 CBX8Q9HC52 389 aa4.27□□□□□ -1.73
RGPD1-202ENST00000409776 AVENQ9NQS1 362 aaPredicted RBP4.27□□□□□ -1.73
RGPD1-202ENST00000409776 PHF11Q9UIL8 331 aa4.27□□□□□ -1.73
RGPD1-202ENST00000409776 TAF6LQ9Y6J9 622 aa4.27□□□□□ -1.73
RGPD1-202ENST00000409776 GIMAP1-GIMAP5A0A087WTJ2 511 aa4.27□□□□□ -1.73
RGPD1-202ENST00000409776 MEFVO15553 781 aaPredicted RBP4.27□□□□□ -1.73
RGPD1-202ENST00000409776 CIDEAO60543 219 aa4.27□□□□□ -1.73
RGPD1-202ENST00000409776 SIN3BO75182 1162 aa4.27□□□□□ -1.73
RGPD1-202ENST00000409776 THP07101 528 aa4.27□□□□□ -1.73
RGPD1-202ENST00000409776 BCRP11274 1271 aa4.27□□□□□ -1.73
RGPD1-202ENST00000409776 IFI30P13284 250 aa4.27□□□□□ -1.73
RGPD1-202ENST00000409776 UQCRBP14927 111 aa4.27□□□□□ -1.73
RGPD1-202ENST00000409776 PVALBP20472 110 aaPredicted RBP4.27□□□□□ -1.73
RGPD1-202ENST00000409776 ANXA11P50995 505 aaKnown RBP4.27□□□□□ -1.73
RGPD1-202ENST00000409776 AFF1P51825 1210 aaKnown RBP4.27□□□□□ -1.73
RGPD1-202ENST00000409776 HDGFP51858 240 aaKnown RBP4.27□□□□□ -1.73
RGPD1-202ENST00000409776 PSMD4P55036 377 aaKnown RBP4.27□□□□□ -1.73
RGPD1-202ENST00000409776 ZBTB6Q15916 424 aa4.27□□□□□ -1.73
RGPD1-202ENST00000409776 ZSCAN25Q6NSZ9 544 aa4.27□□□□□ -1.73
RGPD1-202ENST00000409776 LRRC69Q6ZNQ3 347 aa4.27□□□□□ -1.73
RGPD1-202ENST00000409776 TRMT1LQ7Z2T5 733 aaKnown RBP4.27□□□□□ -1.73
RGPD1-202ENST00000409776 SFR1Q86XK3 245 aa4.27□□□□□ -1.73
RGPD1-202ENST00000409776 OR5T2Q8NGG2 359 aa4.27□□□□□ -1.73
RGPD1-202ENST00000409776 FBXO30Q8TB52 745 aa4.27□□□□□ -1.73
RGPD1-202ENST00000409776 MED10Q9BTT4 135 aa4.27□□□□□ -1.73
RGPD1-202ENST00000409776 A1CFQ9NQ94 594 aaKnown RBP4.27□□□□□ -1.73
RGPD1-202ENST00000409776 PTTG3PQ9NZH4 202 aa4.27□□□□□ -1.73
RGPD1-202ENST00000409776 EIF2B4Q9UI10 523 aaKnown RBP4.27□□□□□ -1.73
RGPD1-202ENST00000409776 LEF1Q9UJU2 399 aaPredicted RBP4.27□□□□□ -1.73
RGPD1-202ENST00000409776 GAKO14976 1311 aa4.27□□□□□ -1.73
RGPD1-202ENST00000409776 MROH5Q6ZUA9 1318 aa4.27□□□□□ -1.73
RGPD1-202ENST00000409776 UBE2QL1A1L167 161 aa4.27□□□□□ -1.73
RGPD1-202ENST00000409776 SNAP23O00161 211 aa4.27□□□□□ -1.73
RGPD1-202ENST00000409776 MEIS1O00470 390 aa4.27□□□□□ -1.73
RGPD1-202ENST00000409776 ARHGAP6O43182 974 aa4.27□□□□□ -1.73
RGPD1-202ENST00000409776 HUS1O60921 280 aa4.27□□□□□ -1.73
RGPD1-202ENST00000409776 FGFR1P11362 822 aa4.27□□□□□ -1.73
RGPD1-202ENST00000409776 ZNF14P17017 642 aaPredicted RBP4.27□□□□□ -1.73
RGPD1-202ENST00000409776 HNF1AP20823 631 aa4.27□□□□□ -1.73
RGPD1-202ENST00000409776 CASP5P51878 434 aa4.27□□□□□ -1.73
RGPD1-202ENST00000409776 OSTNP61366 133 aa4.27□□□□□ -1.73
RGPD1-202ENST00000409776 TMPRSS15P98073 1019 aa4.27□□□□□ -1.73
RGPD1-202ENST00000409776 DEFA6Q01524 100 aa4.27□□□□□ -1.73
RGPD1-202ENST00000409776 PTPROQ16827 1216 aa4.27□□□□□ -1.73
RGPD1-202ENST00000409776 CARD16Q5EG05 197 aa4.27□□□□□ -1.73
RGPD1-202ENST00000409776 PADI6Q6TGC4 694 aa4.27□□□□□ -1.73
RGPD1-202ENST00000409776 EPM2AIP1Q7L775 607 aaPredicted RBP4.27□□□□□ -1.73
RGPD1-202ENST00000409776 NT5DC3Q86UY8 548 aa4.27□□□□□ -1.73
RGPD1-202ENST00000409776 FAR1Q8WVX9 515 aa4.27□□□□□ -1.73
RGPD1-202ENST00000409776 IFT43Q96FT9 208 aa4.27□□□□□ -1.73
RGPD1-202ENST00000409776 EPN3Q9H201 632 aa4.27□□□□□ -1.73
RGPD1-202ENST00000409776 PRDM11Q9NQV5 511 aa4.27□□□□□ -1.73
RGPD1-202ENST00000409776 CATSPERZQ9NTU4 200 aa4.27□□□□□ -1.73
RGPD1-202ENST00000409776 TCP11L1Q9NUJ3 509 aa4.27□□□□□ -1.73
RGPD1-202ENST00000409776 INTS9Q9NV88 658 aaKnown RBP4.27□□□□□ -1.73
RGPD1-202ENST00000409776 GMIPQ9P107 970 aa4.27□□□□□ -1.73
RGPD1-202ENST00000409776 HMGXB4Q9UGU5 601 aa4.27□□□□□ -1.73
RGPD1-202ENST00000409776 EXOC7Q9UPT5 735 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms