RNA–Protein interactions for RNA: ENST00000409747.5

CBX3-203, Transcript of chromobox 3, humanhuman

TSL 1 (best) BASIC

Gene CBX3, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-203ENST00000409747 CSTF1Q05048 431 aaKnown RBP15.88■□□□□ 0.13
CBX3-203ENST00000409747 NFE2Q16621 373 aaPredicted RBP15.88■□□□□ 0.13
CBX3-203ENST00000409747 GPR158Q5T848 1215 aa15.88■□□□□ 0.13
CBX3-203ENST00000409747 GAREM2Q75VX8 874 aa15.88■□□□□ 0.13
CBX3-203ENST00000409747 ARID3BQ8IVW6 561 aaPredicted RBP15.88■□□□□ 0.13
CBX3-203ENST00000409747 TMEM86AQ8N2M4 240 aa15.88■□□□□ 0.13
CBX3-203ENST00000409747 C1orf127Q8N9H9 656 aa15.88■□□□□ 0.13
CBX3-203ENST00000409747 SPATA18Q8TC71 538 aa15.88■□□□□ 0.13
CBX3-203ENST00000409747 NOC3LQ8WTT2 800 aaKnown RBP15.88■□□□□ 0.13
CBX3-203ENST00000409747 SNX21Q969T3 373 aa15.88■□□□□ 0.13
CBX3-203ENST00000409747 LPIN3Q9BQK8 851 aa15.88■□□□□ 0.13
CBX3-203ENST00000409747 CBWD1Q9BRT8 395 aa15.88■□□□□ 0.13
CBX3-203ENST00000409747 KBTBD4Q9NVX7 518 aa15.88■□□□□ 0.13
CBX3-203ENST00000409747 ABI2Q9NYB9 513 aaPredicted RBP15.88■□□□□ 0.13
CBX3-203ENST00000409747 NDRG2Q9UN36 371 aaKnown RBP15.88■□□□□ 0.13
CBX3-203ENST00000409747 PCDHB5Q9Y5E4 795 aa15.88■□□□□ 0.13
CBX3-203ENST00000409747 CUTAO60888 179 aa15.87■□□□□ 0.13
CBX3-203ENST00000409747 PRPF6O94906 941 aaKnown RBP15.87■□□□□ 0.13
CBX3-203ENST00000409747 HAPLN1P10915 354 aaPredicted RBP15.87■□□□□ 0.13
CBX3-203ENST00000409747 WEE1P30291 646 aa15.87■□□□□ 0.13
CBX3-203ENST00000409747 RBP5P82980 135 aa15.87■□□□□ 0.13
CBX3-203ENST00000409747 MYL7Q01449 175 aa15.87■□□□□ 0.13
CBX3-203ENST00000409747 SURF1Q15526 300 aa15.87■□□□□ 0.13
CBX3-203ENST00000409747 ARHGAP29Q52LW3 1261 aa15.87■□□□□ 0.13
CBX3-203ENST00000409747 STXBP5Q5T5C0 1151 aa15.87■□□□□ 0.13
CBX3-203ENST00000409747 HSCBQ8IWL3 235 aa15.87■□□□□ 0.13
CBX3-203ENST00000409747 IQUBQ8NA54 791 aa15.87■□□□□ 0.13
CBX3-203ENST00000409747 LEO1Q8WVC0 666 aaPredicted RBP15.87■□□□□ 0.13
CBX3-203ENST00000409747 ANKRD36BP1Q96IX9 119 aa15.87■□□□□ 0.13
CBX3-203ENST00000409747 FAM126AQ9BYI3 521 aaPredicted RBP15.87■□□□□ 0.13
CBX3-203ENST00000409747 FGFBP2Q9BYJ0 223 aa15.87■□□□□ 0.13
CBX3-203ENST00000409747 TRIM9Q9C026 710 aa15.87■□□□□ 0.13
CBX3-203ENST00000409747 TASP1Q9H6P5 420 aa15.87■□□□□ 0.13
CBX3-203ENST00000409747 C8orf33Q9H7E9 229 aaPredicted RBP15.87■□□□□ 0.13
CBX3-203ENST00000409747 MAGEF1Q9HAY2 307 aa15.87■□□□□ 0.13
CBX3-203ENST00000409747 PRMT8Q9NR22 394 aaPredicted RBP15.87■□□□□ 0.13
CBX3-203ENST00000409747 PTPRZ1P23471 2315 aaPredicted RBP15.87■□□□□ 0.13
CBX3-203ENST00000409747 CACNA1IQ9P0X4 2223 aa15.86■□□□□ 0.13
CBX3-203ENST00000409747 GOLGA8IPA6NC78 632 aa15.86■□□□□ 0.13
CBX3-203ENST00000409747 GOLGA8JA6NMD2 632 aa15.86■□□□□ 0.13
CBX3-203ENST00000409747 ARNTLO00327 626 aa15.86■□□□□ 0.13
CBX3-203ENST00000409747 EIF3DO15371 548 aaKnown RBP eCLIP15.86■□□□□ 0.13
CBX3-203ENST00000409747 HSP90AA1P07900 732 aaKnown RBP15.86■□□□□ 0.13
CBX3-203ENST00000409747 WNT7BP56706 349 aa15.86■□□□□ 0.13
CBX3-203ENST00000409747 BFSP1Q12934 665 aa15.86■□□□□ 0.13
CBX3-203ENST00000409747 E2F4Q16254 413 aa15.86■□□□□ 0.13
CBX3-203ENST00000409747 PDCL2Q8N4E4 241 aa15.86■□□□□ 0.13
CBX3-203ENST00000409747 CSGALNACT2Q8N6G5 542 aa15.86■□□□□ 0.13
CBX3-203ENST00000409747 ATRIPQ8WXE1 791 aa15.86■□□□□ 0.13
CBX3-203ENST00000409747 HINFPQ9BQA5 517 aa15.86■□□□□ 0.13
CBX3-203ENST00000409747 ACBD6Q9BR61 282 aa15.86■□□□□ 0.13
CBX3-203ENST00000409747 MKNK1Q9BUB5 465 aa15.86■□□□□ 0.13
CBX3-203ENST00000409747 CHRDQ9H2X0 955 aa15.86■□□□□ 0.13
CBX3-203ENST00000409747 PCIF1Q9H4Z3 704 aa15.86■□□□□ 0.13
CBX3-203ENST00000409747 KIAA1586Q9HCI6 787 aa15.86■□□□□ 0.13
CBX3-203ENST00000409747 ZSCAN32Q9NX65 697 aa15.86■□□□□ 0.13
CBX3-203ENST00000409747 GDAP2Q9NXN4 497 aa15.86■□□□□ 0.13
CBX3-203ENST00000409747 NCANO14594 1321 aa15.86■□□□□ 0.13
CBX3-203ENST00000409747 ZNF292O60281 2723 aa15.86■□□□□ 0.13
CBX3-203ENST00000409747 SHISA7A6NL88 538 aa15.85■□□□□ 0.13
CBX3-203ENST00000409747 KRT19P08727 400 aa15.85■□□□□ 0.13
CBX3-203ENST00000409747 DDX6P26196 483 aaKnown RBP eCLIP15.85■□□□□ 0.13
CBX3-203ENST00000409747 KPNA1P52294 538 aaPredicted RBP15.85■□□□□ 0.13
CBX3-203ENST00000409747 ASIC1P78348 528 aa15.85■□□□□ 0.13
CBX3-203ENST00000409747 PLCB2Q00722 1185 aa15.85■□□□□ 0.13
CBX3-203ENST00000409747 MYO1EQ12965 1108 aa15.85■□□□□ 0.13
CBX3-203ENST00000409747 FZD5Q13467 585 aa15.85■□□□□ 0.13
CBX3-203ENST00000409747 LRRC32Q14392 662 aa15.85■□□□□ 0.13
CBX3-203ENST00000409747 CNNM4Q6P4Q7 775 aa15.85■□□□□ 0.13
CBX3-203ENST00000409747 MAMSTRQ6ZN01 415 aa15.85■□□□□ 0.13
CBX3-203ENST00000409747 LRRTM3Q86VH5 581 aa15.85■□□□□ 0.13
CBX3-203ENST00000409747 ZNF687Q8N1G0 1237 aa15.85■□□□□ 0.13
CBX3-203ENST00000409747 ZSWIM2Q8NEG5 633 aa15.85■□□□□ 0.13
CBX3-203ENST00000409747 RUBCNQ92622 972 aa15.85■□□□□ 0.13
CBX3-203ENST00000409747 DHX58Q96C10 678 aa15.85■□□□□ 0.13
CBX3-203ENST00000409747 RSPRY1Q96DX4 576 aa15.85■□□□□ 0.13
CBX3-203ENST00000409747 MTMR12Q9C0I1 747 aa15.85■□□□□ 0.13
CBX3-203ENST00000409747 PDE11AQ9HCR9 933 aa15.85■□□□□ 0.13
CBX3-203ENST00000409747 ABCB6Q9NP58 842 aa15.85■□□□□ 0.13
CBX3-203ENST00000409747 L1RE1Q9UN81 338 aa15.85■□□□□ 0.13
CBX3-203ENST00000409747 ZNF233A6NK53 670 aa15.85■□□□□ 0.13
CBX3-203ENST00000409747 TNNC2P02585 160 aa15.85■□□□□ 0.13
CBX3-203ENST00000409747 PCSK1P29120 753 aa15.85■□□□□ 0.13
CBX3-203ENST00000409747 LHX1P48742 406 aa15.85■□□□□ 0.13
CBX3-203ENST00000409747 MTAPQ13126 283 aa15.85■□□□□ 0.13
CBX3-203ENST00000409747 TOP6BLQ8N6T0 577 aa15.85■□□□□ 0.13
CBX3-203ENST00000409747 BPIFB1Q8TDL5 484 aa15.85■□□□□ 0.13
CBX3-203ENST00000409747 GIPC2Q8TF65 315 aa15.85■□□□□ 0.13
CBX3-203ENST00000409747 IL21Q9HBE4 155 aa15.85■□□□□ 0.13
CBX3-203ENST00000409747 THG1LQ9NWX6 298 aaKnown RBP15.85■□□□□ 0.13
CBX3-203ENST00000409747 DDX43Q9NXZ2 648 aaKnown RBP15.85■□□□□ 0.13
CBX3-203ENST00000409747 TFIP11Q9UBB9 837 aaKnown RBP15.85■□□□□ 0.13
CBX3-203ENST00000409747 SNX9Q9Y5X1 595 aa15.85■□□□□ 0.13
CBX3-203ENST00000409747 UBE4BO95155 1302 aa15.85■□□□□ 0.13
CBX3-203ENST00000409747 GVINP1Q7Z2Y8 2422 aa15.84■□□□□ 0.13
CBX3-203ENST00000409747 SOBPA7XYQ1 873 aa15.84■□□□□ 0.13
CBX3-203ENST00000409747 PRPF40AO75400 957 aaKnown RBP15.84■□□□□ 0.13
CBX3-203ENST00000409747 CSH1P0DML2 217 aa15.84■□□□□ 0.13
CBX3-203ENST00000409747 CSH2P0DML3 217 aa15.84■□□□□ 0.13
CBX3-203ENST00000409747 CCNE1P24864 410 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms