RNA–Protein interactions for RNA: ENST00000409672.5

SCN9A-203, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SCN9A, Length 9,768 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-203ENST00000409672 TTC13Q8NBP0 860 aa8.78□□□□□ -1
SCN9A-203ENST00000409672 LINC00301Q8NCQ3 95 aa8.78□□□□□ -1
SCN9A-203ENST00000409672 SEPT1Q8WYJ6 367 aa8.78□□□□□ -1
SCN9A-203ENST00000409672 VPS50Q96JG6 964 aa8.78□□□□□ -1
SCN9A-203ENST00000409672 DDX47Q9H0S4 455 aaKnown RBP8.78□□□□□ -1
SCN9A-203ENST00000409672 PARVBQ9HBI1 364 aa8.78□□□□□ -1
SCN9A-203ENST00000409672 PDZK1P1A8MUH7 402 aa8.77□□□□□ -1
SCN9A-203ENST00000409672 SPATA31D3P0C874 917 aa8.77□□□□□ -1
SCN9A-203ENST00000409672 VCLP18206 1134 aa8.77□□□□□ -1
SCN9A-203ENST00000409672 PDIA6Q15084 440 aa8.77□□□□□ -1
SCN9A-203ENST00000409672 PPP4R3CPQ6ZMV5 832 aa8.77□□□□□ -1
SCN9A-203ENST00000409672 SPATA31D4Q6ZUB0 917 aa8.77□□□□□ -1
SCN9A-203ENST00000409672 GLIS2Q9BZE0 524 aaPredicted RBP8.77□□□□□ -1
SCN9A-203ENST00000409672 SLC38A7Q9NVC3 462 aa8.77□□□□□ -1
SCN9A-203ENST00000409672 DDIT4Q9NX09 232 aa8.77□□□□□ -1
SCN9A-203ENST00000409672 HERC5Q9UII4 1024 aaKnown RBP8.77□□□□□ -1
SCN9A-203ENST00000409672 SYNGAP1Q96PV0 1343 aa8.77□□□□□ -1
SCN9A-203ENST00000409672 CYB561D2O14569 222 aa8.77□□□□□ -1.01
SCN9A-203ENST00000409672 GPR182O15218 404 aa8.77□□□□□ -1.01
SCN9A-203ENST00000409672 ZFXP17010 805 aaPredicted RBP8.77□□□□□ -1.01
SCN9A-203ENST00000409672 NDUFV1P49821 464 aa8.77□□□□□ -1.01
SCN9A-203ENST00000409672 GATAD2AQ86YP4 633 aa8.77□□□□□ -1.01
SCN9A-203ENST00000409672 TAAR1Q96RJ0 339 aa8.77□□□□□ -1.01
SCN9A-203ENST00000409672 NT5C1AQ9BXI3 368 aa8.77□□□□□ -1.01
SCN9A-203ENST00000409672 IL1RAPL1Q9NZN1 696 aa8.77□□□□□ -1.01
SCN9A-203ENST00000409672 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.77□□□□□ -1.01
SCN9A-203ENST00000409672 RRN3P2A6NIE6 340 aa8.77□□□□□ -1.01
SCN9A-203ENST00000409672 NDUFB10O96000 172 aa8.77□□□□□ -1.01
SCN9A-203ENST00000409672 PMS2P54278 862 aa8.77□□□□□ -1.01
SCN9A-203ENST00000409672 HIC1Q14526 733 aa8.77□□□□□ -1.01
SCN9A-203ENST00000409672 HIST2H2ACQ16777 129 aaPredicted RBP8.77□□□□□ -1.01
SCN9A-203ENST00000409672 P3H1Q32P28 736 aa8.77□□□□□ -1.01
SCN9A-203ENST00000409672 HIST2H2AA3Q6FI13 130 aa8.77□□□□□ -1.01
SCN9A-203ENST00000409672 HIBCHQ6NVY1 386 aaPredicted RBP8.77□□□□□ -1.01
SCN9A-203ENST00000409672 CLEC4GQ6UXB4 293 aa8.77□□□□□ -1.01
SCN9A-203ENST00000409672 DCP1BQ8IZD4 617 aaKnown RBP8.77□□□□□ -1.01
SCN9A-203ENST00000409672 RNASE11Q8TAA1 199 aaKnown RBP8.77□□□□□ -1.01
SCN9A-203ENST00000409672 DTX3LQ8TDB6 740 aa8.77□□□□□ -1.01
SCN9A-203ENST00000409672 FAM84BQ96KN1 310 aaPredicted RBP8.77□□□□□ -1.01
SCN9A-203ENST00000409672 CYP4F12Q9HCS2 524 aa8.77□□□□□ -1.01
SCN9A-203ENST00000409672 BARHL2Q9NY43 387 aa8.77□□□□□ -1.01
SCN9A-203ENST00000409672 RNF112Q9ULX5 631 aa8.77□□□□□ -1.01
SCN9A-203ENST00000409672 CNTNAP2Q9UHC6 1331 aa8.77□□□□□ -1.01
SCN9A-203ENST00000409672 hCG_1984214I3L0E3 225 aa8.77□□□□□ -1.01
SCN9A-203ENST00000409672 OPLAHO14841 1288 aa8.77□□□□□ -1.01
SCN9A-203ENST00000409672 AIM2O14862 343 aa8.77□□□□□ -1.01
SCN9A-203ENST00000409672 MAN1A2O60476 641 aa8.77□□□□□ -1.01
SCN9A-203ENST00000409672 PYGBP11216 843 aa8.77□□□□□ -1.01
SCN9A-203ENST00000409672 EPHB2P29323 1055 aa8.77□□□□□ -1.01
SCN9A-203ENST00000409672 POU4F1Q01851 419 aa8.77□□□□□ -1.01
SCN9A-203ENST00000409672 MED21Q13503 144 aa8.77□□□□□ -1.01
SCN9A-203ENST00000409672 BNIPLQ7Z465 357 aa8.77□□□□□ -1.01
SCN9A-203ENST00000409672 ZNF713Q8N859 430 aaPredicted RBP8.77□□□□□ -1.01
SCN9A-203ENST00000409672 OSMRQ99650 979 aa8.77□□□□□ -1.01
SCN9A-203ENST00000409672 LY9Q9HBG7 655 aa8.77□□□□□ -1.01
SCN9A-203ENST00000409672 ANKARQ7Z5J8 1434 aa8.77□□□□□ -1.01
SCN9A-203ENST00000409672 ADM5C9JUS6 153 aa8.77□□□□□ -1.01
SCN9A-203ENST00000409672 MSH4O15457 936 aa8.77□□□□□ -1.01
SCN9A-203ENST00000409672 HNRNPCP07910 306 aaKnown RBP eCLIP8.77□□□□□ -1.01
SCN9A-203ENST00000409672 PRIM2P49643 509 aa8.77□□□□□ -1.01
SCN9A-203ENST00000409672 PTGISQ16647 500 aa8.77□□□□□ -1.01
SCN9A-203ENST00000409672 APOL2Q9BQE5 337 aa8.77□□□□□ -1.01
SCN9A-203ENST00000409672 ROBO2Q9HCK4 1378 aa8.77□□□□□ -1.01
SCN9A-203ENST00000409672 NCKAP1LP55160 1127 aa8.77□□□□□ -1.01
SCN9A-203ENST00000409672 ADCY2Q08462 1091 aa8.77□□□□□ -1.01
SCN9A-203ENST00000409672 POMGNT2Q8NAT1 580 aa8.77□□□□□ -1.01
SCN9A-203ENST00000409672 ZNF185O15231 689 aa8.77□□□□□ -1.01
SCN9A-203ENST00000409672 GHRP10912 638 aa8.77□□□□□ -1.01
SCN9A-203ENST00000409672 POU1F1P28069 291 aa8.77□□□□□ -1.01
SCN9A-203ENST00000409672 PARGQ86W56 976 aa8.77□□□□□ -1.01
SCN9A-203ENST00000409672 ZNF555Q8NEP9 628 aa8.77□□□□□ -1.01
SCN9A-203ENST00000409672 TMC2Q8TDI7 906 aa8.77□□□□□ -1.01
SCN9A-203ENST00000409672 PRMT1Q99873 361 aaKnown RBP8.77□□□□□ -1.01
SCN9A-203ENST00000409672 THG1LQ9NWX6 298 aaKnown RBP8.77□□□□□ -1.01
SCN9A-203ENST00000409672 SPACA6W5XKT8 324 aa8.77□□□□□ -1.01
SCN9A-203ENST00000409672 FLT1P17948 1338 aa8.77□□□□□ -1.01
SCN9A-203ENST00000409672 SLC12A8A0AV02 714 aa8.77□□□□□ -1.01
SCN9A-203ENST00000409672 KATNA1O75449 491 aa8.77□□□□□ -1.01
SCN9A-203ENST00000409672 C16orf72Q14CZ0 275 aa8.77□□□□□ -1.01
SCN9A-203ENST00000409672 NBPF9Q3BBW0 867 aa8.77□□□□□ -1.01
SCN9A-203ENST00000409672 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.77□□□□□ -1.01
SCN9A-203ENST00000409672 RNF44Q7L0R7 432 aa8.77□□□□□ -1.01
SCN9A-203ENST00000409672 PLEKHH3Q7Z736 793 aa8.77□□□□□ -1.01
SCN9A-203ENST00000409672 WNK4Q96J92 1243 aa8.77□□□□□ -1.01
SCN9A-203ENST00000409672 SETD4Q9NVD3 440 aa8.77□□□□□ -1.01
SCN9A-203ENST00000409672 CAB39Q9Y376 341 aaPredicted RBP8.77□□□□□ -1.01
SCN9A-203ENST00000409672 TBC1D3BA6NDS4 549 aa8.76□□□□□ -1.01
SCN9A-203ENST00000409672 PDHXO00330 501 aa8.76□□□□□ -1.01
SCN9A-203ENST00000409672 RGS4P49798 205 aa8.76□□□□□ -1.01
SCN9A-203ENST00000409672 TMEM154Q6P9G4 183 aa8.76□□□□□ -1.01
SCN9A-203ENST00000409672 SARM1Q6SZW1 724 aa8.76□□□□□ -1.01
SCN9A-203ENST00000409672 RHOT1Q8IXI2 618 aa8.76□□□□□ -1.01
SCN9A-203ENST00000409672 FAM20AQ96MK3 541 aa8.76□□□□□ -1.01
SCN9A-203ENST00000409672 BTBD9Q96Q07 612 aa8.76□□□□□ -1.01
SCN9A-203ENST00000409672 A0A087WUV0 522 aaPredicted RBP8.76□□□□□ -1.01
SCN9A-203ENST00000409672 GNG14A0A1W2PPG7 69 aa8.76□□□□□ -1.01
SCN9A-203ENST00000409672 ASAP2O43150 1006 aa8.76□□□□□ -1.01
SCN9A-203ENST00000409672 FLT3P36888 993 aa8.76□□□□□ -1.01
SCN9A-203ENST00000409672 ZBED6P86452 979 aa8.76□□□□□ -1.01
SCN9A-203ENST00000409672 FAM171A1Q5VUB5 890 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms