RNA–Protein interactions for RNA: ENST00000409627.6

SUMO1-208, Transcript of small ubiquitin-like modifier 1, humanhuman

TSL 3

Gene SUMO1, Length 722 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1-208ENST00000409627 TEX28O15482 410 aa17.74■□□□□ 0.43
SUMO1-208ENST00000409627 ADH1AP07327 375 aa17.74■□□□□ 0.43
SUMO1-208ENST00000409627 CNPP09543 421 aaKnown RBP17.74■□□□□ 0.43
SUMO1-208ENST00000409627 ACO1P21399 889 aaKnown RBP17.74■□□□□ 0.43
SUMO1-208ENST00000409627 LMO2P25791 158 aa17.74■□□□□ 0.43
SUMO1-208ENST00000409627 NDST1P52848 882 aa17.74■□□□□ 0.43
SUMO1-208ENST00000409627 ADGRE1Q14246 886 aa17.74■□□□□ 0.43
SUMO1-208ENST00000409627 RSPO2Q6UXX9 243 aaPredicted RBP17.74■□□□□ 0.43
SUMO1-208ENST00000409627 KLHL5Q96PQ7 755 aa17.74■□□□□ 0.43
SUMO1-208ENST00000409627 GAS2L1Q99501 681 aaPredicted RBP17.74■□□□□ 0.43
SUMO1-208ENST00000409627 TRIM5Q9C035 493 aa17.74■□□□□ 0.43
SUMO1-208ENST00000409627 ZCWPW1Q9H0M4 648 aa17.74■□□□□ 0.43
SUMO1-208ENST00000409627 AJAP1Q9UKB5 411 aaPredicted RBP17.74■□□□□ 0.43
SUMO1-208ENST00000409627 FHOD1Q9Y613 1164 aa17.74■□□□□ 0.43
SUMO1-208ENST00000409627 ITIH6Q6UXX5 1313 aa17.73■□□□□ 0.43
SUMO1-208ENST00000409627 MTCL1Q9Y4B5 1905 aaKnown RBP17.73■□□□□ 0.43
SUMO1-208ENST00000409627 EPHB6O15197 1021 aa17.73■□□□□ 0.43
SUMO1-208ENST00000409627 HCRTO43612 131 aa17.73■□□□□ 0.43
SUMO1-208ENST00000409627 RPL17P18621 184 aaKnown RBP17.73■□□□□ 0.43
SUMO1-208ENST00000409627 ACAT1P24752 427 aaKnown RBP17.73■□□□□ 0.43
SUMO1-208ENST00000409627 TSPY1Q01534 308 aa17.73■□□□□ 0.43
SUMO1-208ENST00000409627 RAB33AQ14088 237 aa17.73■□□□□ 0.43
SUMO1-208ENST00000409627 PTPN21Q16825 1174 aa17.73■□□□□ 0.43
SUMO1-208ENST00000409627 INTS6LQ5JSJ4 861 aaKnown RBP17.73■□□□□ 0.43
SUMO1-208ENST00000409627 Q7L0L9 218 aa17.73■□□□□ 0.43
SUMO1-208ENST00000409627 WHAMMQ8TF30 809 aa17.73■□□□□ 0.43
SUMO1-208ENST00000409627 SHC3Q92529 594 aa17.73■□□□□ 0.43
SUMO1-208ENST00000409627 PPP2R3CQ969Q6 453 aa17.73■□□□□ 0.43
SUMO1-208ENST00000409627 SYT15Q9BQS2 421 aa17.73■□□□□ 0.43
SUMO1-208ENST00000409627 NT5C1AQ9BXI3 368 aa17.73■□□□□ 0.43
SUMO1-208ENST00000409627 DNAI2Q9GZS0 605 aa17.73■□□□□ 0.43
SUMO1-208ENST00000409627 NSUN3Q9H649 340 aaKnown RBP17.73■□□□□ 0.43
SUMO1-208ENST00000409627 HMGXB4Q9UGU5 601 aa17.73■□□□□ 0.43
SUMO1-208ENST00000409627 CNTN6Q9UQ52 1028 aa17.73■□□□□ 0.43
SUMO1-208ENST00000409627 MTCH2Q9Y6C9 303 aa17.73■□□□□ 0.43
SUMO1-208ENST00000409627 PTPRDP23468 1912 aa17.72■□□□□ 0.43
SUMO1-208ENST00000409627 FSD2A1L4K1 749 aa17.72■□□□□ 0.43
SUMO1-208ENST00000409627 ADAM12O43184 909 aa17.72■□□□□ 0.43
SUMO1-208ENST00000409627 C1RP00736 705 aa17.72■□□□□ 0.43
SUMO1-208ENST00000409627 PDGFRBP09619 1106 aa17.72■□□□□ 0.43
SUMO1-208ENST00000409627 TRIM21P19474 475 aaKnown RBP17.72■□□□□ 0.43
SUMO1-208ENST00000409627 OR1D2P34982 312 aa17.72■□□□□ 0.43
SUMO1-208ENST00000409627 POLR2FP61218 127 aaKnown RBP17.72■□□□□ 0.43
SUMO1-208ENST00000409627 ROR1Q01973 937 aa17.72■□□□□ 0.43
SUMO1-208ENST00000409627 ARHGAP44Q17R89 818 aa17.72■□□□□ 0.43
SUMO1-208ENST00000409627 FIGNQ5HY92 759 aa17.72■□□□□ 0.43
SUMO1-208ENST00000409627 ADGRD2Q7Z7M1 963 aa17.72■□□□□ 0.43
SUMO1-208ENST00000409627 DCP1BQ8IZD4 617 aaKnown RBP17.72■□□□□ 0.43
SUMO1-208ENST00000409627 CRYBG2Q8N1P7 616 aa17.72■□□□□ 0.43
SUMO1-208ENST00000409627 DEFB123Q8N688 67 aa17.72■□□□□ 0.43
SUMO1-208ENST00000409627 IQCDQ96DY2 449 aa17.72■□□□□ 0.43
SUMO1-208ENST00000409627 TNIP3Q96KP6 325 aa17.72■□□□□ 0.43
SUMO1-208ENST00000409627 TWNKQ96RR1 684 aa17.72■□□□□ 0.43
SUMO1-208ENST00000409627 TMEM209Q96SK2 561 aa17.72■□□□□ 0.43
SUMO1-208ENST00000409627 CDCA3Q99618 268 aaPredicted RBP17.72■□□□□ 0.43
SUMO1-208ENST00000409627 PKMYT1Q99640 499 aa17.72■□□□□ 0.43
SUMO1-208ENST00000409627 NUP58Q9BVL2 599 aa17.72■□□□□ 0.43
SUMO1-208ENST00000409627 STK33Q9BYT3 514 aa17.72■□□□□ 0.43
SUMO1-208ENST00000409627 DPEP3Q9H4B8 488 aa17.72■□□□□ 0.43
SUMO1-208ENST00000409627 CEP72Q9P209 647 aa17.72■□□□□ 0.43
SUMO1-208ENST00000409627 PCDHB4Q9Y5E5 795 aa17.72■□□□□ 0.43
SUMO1-208ENST00000409627 GOLGA6L3A6NEY3 463 aa17.71■□□□□ 0.43
SUMO1-208ENST00000409627 CLASP2O75122 1294 aaKnown RBP17.71■□□□□ 0.43
SUMO1-208ENST00000409627 OR4Q2P0C623 313 aa17.71■□□□□ 0.43
SUMO1-208ENST00000409627 CPB1P15086 417 aa17.71■□□□□ 0.43
SUMO1-208ENST00000409627 KLRC2P26717 231 aa17.71■□□□□ 0.43
SUMO1-208ENST00000409627 ZNF75DP51815 510 aa17.71■□□□□ 0.43
SUMO1-208ENST00000409627 ZNF132P52740 706 aa17.71■□□□□ 0.43
SUMO1-208ENST00000409627 RAD23BP54727 409 aa17.71■□□□□ 0.43
SUMO1-208ENST00000409627 PSMC1P62191 440 aaKnown RBP17.71■□□□□ 0.43
SUMO1-208ENST00000409627 SMARCB1Q12824 385 aa17.71■□□□□ 0.43
SUMO1-208ENST00000409627 GPR17Q13304 367 aa17.71■□□□□ 0.43
SUMO1-208ENST00000409627 RAPGEF1Q13905 1077 aa17.71■□□□□ 0.43
SUMO1-208ENST00000409627 DRAP1Q14919 205 aaPredicted RBP17.71■□□□□ 0.43
SUMO1-208ENST00000409627 MAPRE1Q15691 268 aaKnown RBP17.71■□□□□ 0.43
SUMO1-208ENST00000409627 DUSP6Q16828 381 aa17.71■□□□□ 0.43
SUMO1-208ENST00000409627 TPGS2Q68CL5 300 aa17.71■□□□□ 0.43
SUMO1-208ENST00000409627 FAM171BQ6P995 826 aa17.71■□□□□ 0.43
SUMO1-208ENST00000409627 TMEM270Q6UE05 265 aa17.71■□□□□ 0.43
SUMO1-208ENST00000409627 PPFIBP1Q86W92 1011 aa17.71■□□□□ 0.43
SUMO1-208ENST00000409627 GLYCTKQ8IVS8 523 aa17.71■□□□□ 0.43
SUMO1-208ENST00000409627 VSTM4Q8IW00 320 aa17.71■□□□□ 0.43
SUMO1-208ENST00000409627 B3GALNT2Q8NCR0 500 aa17.71■□□□□ 0.43
SUMO1-208ENST00000409627 ZNF461Q8TAF7 563 aa17.71■□□□□ 0.43
SUMO1-208ENST00000409627 TMEM176AQ96HP8 235 aa17.71■□□□□ 0.43
SUMO1-208ENST00000409627 MRFAP1L1Q96HT8 127 aa17.71■□□□□ 0.43
SUMO1-208ENST00000409627 CDX2Q99626 313 aaPredicted RBP17.71■□□□□ 0.43
SUMO1-208ENST00000409627 EDEM3Q9BZQ6 932 aa17.71■□□□□ 0.43
SUMO1-208ENST00000409627 TTYH3Q9C0H2 523 aa17.71■□□□□ 0.43
SUMO1-208ENST00000409627 GPR88Q9GZN0 384 aa17.71■□□□□ 0.43
SUMO1-208ENST00000409627 ELOVL4Q9GZR5 314 aa17.71■□□□□ 0.43
SUMO1-208ENST00000409627 CRTAC1Q9NQ79 661 aa17.71■□□□□ 0.43
SUMO1-208ENST00000409627 WDR27A2RRH5 827 aa17.7■□□□□ 0.42
SUMO1-208ENST00000409627 F8VZ95 297 aa17.7■□□□□ 0.42
SUMO1-208ENST00000409627 ATP2C2O75185 946 aa17.7■□□□□ 0.42
SUMO1-208ENST00000409627 ABLIM3O94929 683 aa17.7■□□□□ 0.42
SUMO1-208ENST00000409627 PAEPP09466 180 aa17.7■□□□□ 0.42
SUMO1-208ENST00000409627 PTPN1P18031 435 aaKnown RBP17.7■□□□□ 0.42
SUMO1-208ENST00000409627 CLCN4P51793 760 aa17.7■□□□□ 0.42
SUMO1-208ENST00000409627 ARPP19P56211 112 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms