RNA–Protein interactions for RNA: ENST00000409542.5

CHRNA1-205, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,460 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-205ENST00000409542 MLKLQ8NB16 471 aa13.76□□□□□ -0.21
CHRNA1-205ENST00000409542 CCDC34Q96HJ3 373 aa13.76□□□□□ -0.21
CHRNA1-205ENST00000409542 ZFYVE19Q96K21 471 aa13.76□□□□□ -0.21
CHRNA1-205ENST00000409542 PGLYRP2Q96PD5 576 aa13.76□□□□□ -0.21
CHRNA1-205ENST00000409542 MKNK1Q9BUB5 465 aa13.76□□□□□ -0.21
CHRNA1-205ENST00000409542 TMEM134Q9H6X4 195 aa13.76□□□□□ -0.21
CHRNA1-205ENST00000409542 ASAH2Q9NR71 780 aa13.76□□□□□ -0.21
CHRNA1-205ENST00000409542 TOPORSQ9NS56 1045 aaPredicted RBP13.76□□□□□ -0.21
CHRNA1-205ENST00000409542 SLC38A7Q9NVC3 462 aa13.76□□□□□ -0.21
CHRNA1-205ENST00000409542 TUBGCP4Q9UGJ1 667 aa13.76□□□□□ -0.21
CHRNA1-205ENST00000409542 SERTAD1Q9UHV2 236 aa13.76□□□□□ -0.21
CHRNA1-205ENST00000409542 MAN1B1Q9UKM7 699 aa13.76□□□□□ -0.21
CHRNA1-205ENST00000409542 KIAA1024Q9UPX6 916 aa13.76□□□□□ -0.21
CHRNA1-205ENST00000409542 YIPF1Q9Y548 306 aa13.76□□□□□ -0.21
CHRNA1-205ENST00000409542 FRYQ5TBA9 3013 aa13.76□□□□□ -0.21
CHRNA1-205ENST00000409542 PHLPP2Q6ZVD8 1323 aa13.76□□□□□ -0.21
CHRNA1-205ENST00000409542 LAMA1P25391 3075 aa13.76□□□□□ -0.21
CHRNA1-205ENST00000409542 KIF26AQ9ULI4 1882 aaPredicted RBP13.75□□□□□ -0.21
CHRNA1-205ENST00000409542 E9PMD0 336 aa13.75□□□□□ -0.21
CHRNA1-205ENST00000409542 POLR2DO15514 142 aaKnown RBP13.75□□□□□ -0.21
CHRNA1-205ENST00000409542 SKILP12757 684 aa13.75□□□□□ -0.21
CHRNA1-205ENST00000409542 CPB1P15086 417 aa13.75□□□□□ -0.21
CHRNA1-205ENST00000409542 RPL9P32969 192 aaKnown RBP13.75□□□□□ -0.21
CHRNA1-205ENST00000409542 CCT6AP40227 531 aaKnown RBP13.75□□□□□ -0.21
CHRNA1-205ENST00000409542 SPAG1Q07617 926 aa13.75□□□□□ -0.21
CHRNA1-205ENST00000409542 MAPK7Q13164 816 aa13.75□□□□□ -0.21
CHRNA1-205ENST00000409542 MORC3Q14149 939 aa13.75□□□□□ -0.21
CHRNA1-205ENST00000409542 ZNF280DQ6N043 979 aa13.75□□□□□ -0.21
CHRNA1-205ENST00000409542 MTERF4Q7Z6M4 381 aaKnown RBP13.75□□□□□ -0.21
CHRNA1-205ENST00000409542 FILIP1Q7Z7B0 1213 aa13.75□□□□□ -0.21
CHRNA1-205ENST00000409542 LONP2Q86WA8 852 aa13.75□□□□□ -0.21
CHRNA1-205ENST00000409542 BEST2Q8NFU1 509 aa13.75□□□□□ -0.21
CHRNA1-205ENST00000409542 ERMNQ8TAM6 284 aa13.75□□□□□ -0.21
CHRNA1-205ENST00000409542 SPATA20Q8TB22 786 aa13.75□□□□□ -0.21
CHRNA1-205ENST00000409542 CSGALNACT1Q8TDX6 532 aa13.75□□□□□ -0.21
CHRNA1-205ENST00000409542 SMARCE1Q969G3 411 aa13.75□□□□□ -0.21
CHRNA1-205ENST00000409542 SLITRK6Q9H5Y7 841 aa13.75□□□□□ -0.21
CHRNA1-205ENST00000409542 GTSE1Q9NYZ3 720 aa13.75□□□□□ -0.21
CHRNA1-205ENST00000409542 ARHGAP28Q9P2N2 729 aa13.75□□□□□ -0.21
CHRNA1-205ENST00000409542 PCDHB8Q9UN66 801 aa13.75□□□□□ -0.21
CHRNA1-205ENST00000409542 CHD6Q8TD26 2715 aa13.75□□□□□ -0.21
CHRNA1-205ENST00000409542 MYBPHLA2RUH7 354 aa13.74□□□□□ -0.21
CHRNA1-205ENST00000409542 SFI1A8K8P3 1242 aa13.74□□□□□ -0.21
CHRNA1-205ENST00000409542 SPECC1L-ADORA2AF8WAN1 911 aa13.74□□□□□ -0.21
CHRNA1-205ENST00000409542 CHADO15335 359 aa13.74□□□□□ -0.21
CHRNA1-205ENST00000409542 HIP1RO75146 1068 aa13.74□□□□□ -0.21
CHRNA1-205ENST00000409542 PAPSS2O95340 614 aaPredicted RBP13.74□□□□□ -0.21
CHRNA1-205ENST00000409542 MCF2P10911 925 aa13.74□□□□□ -0.21
CHRNA1-205ENST00000409542 KPNA1P52294 538 aaPredicted RBP13.74□□□□□ -0.21
CHRNA1-205ENST00000409542 MLLT6P55198 1093 aaPredicted RBP13.74□□□□□ -0.21
CHRNA1-205ENST00000409542 FCHO2Q0JRZ9 810 aa13.74□□□□□ -0.21
CHRNA1-205ENST00000409542 ARID5BQ14865 1188 aa13.74□□□□□ -0.21
CHRNA1-205ENST00000409542 PON2Q15165 354 aa13.74□□□□□ -0.21
CHRNA1-205ENST00000409542 SF3A2Q15428 464 aaKnown RBP13.74□□□□□ -0.21
CHRNA1-205ENST00000409542 TTC38Q5R3I4 469 aa13.74□□□□□ -0.21
CHRNA1-205ENST00000409542 PKN3Q6P5Z2 889 aa13.74□□□□□ -0.21
CHRNA1-205ENST00000409542 ARID3BQ8IVW6 561 aaPredicted RBP13.74□□□□□ -0.21
CHRNA1-205ENST00000409542 TTC9BQ8N6N2 239 aa13.74□□□□□ -0.21
CHRNA1-205ENST00000409542 RUSC1Q9BVN2 902 aa13.74□□□□□ -0.21
CHRNA1-205ENST00000409542 MRPL4Q9BYD3 311 aaKnown RBP13.74□□□□□ -0.21
CHRNA1-205ENST00000409542 HAPLN2Q9GZV7 340 aa13.74□□□□□ -0.21
CHRNA1-205ENST00000409542 CNOT1A5YKK6 2376 aaKnown RBP13.74□□□□□ -0.21
CHRNA1-205ENST00000409542 TM4SF5O14894 197 aa13.74□□□□□ -0.21
CHRNA1-205ENST00000409542 AXIN1O15169 862 aa13.74□□□□□ -0.21
CHRNA1-205ENST00000409542 SLC16A4O15374 487 aa13.74□□□□□ -0.21
CHRNA1-205ENST00000409542 SOAT2O75908 522 aa13.74□□□□□ -0.21
CHRNA1-205ENST00000409542 MUTP22033 750 aa13.74□□□□□ -0.21
CHRNA1-205ENST00000409542 CTHP32929 405 aa13.74□□□□□ -0.21
CHRNA1-205ENST00000409542 PXNP49023 591 aaPredicted RBP13.74□□□□□ -0.21
CHRNA1-205ENST00000409542 CDR1P51861 262 aa13.74□□□□□ -0.21
CHRNA1-205ENST00000409542 ATP2C1P98194 919 aaPredicted RBP13.74□□□□□ -0.21
CHRNA1-205ENST00000409542 TNK2Q07912 1038 aa13.74□□□□□ -0.21
CHRNA1-205ENST00000409542 DUSP4Q13115 394 aa13.74□□□□□ -0.21
CHRNA1-205ENST00000409542 TPD52L1Q16890 204 aaPredicted RBP13.74□□□□□ -0.21
CHRNA1-205ENST00000409542 N4BP2L1Q5TBK1 243 aaPredicted RBP13.74□□□□□ -0.21
CHRNA1-205ENST00000409542 MPZL3Q6UWV2 235 aa13.74□□□□□ -0.21
CHRNA1-205ENST00000409542 GAREM2Q75VX8 874 aa13.74□□□□□ -0.21
CHRNA1-205ENST00000409542 TMC6Q7Z403 805 aa13.74□□□□□ -0.21
CHRNA1-205ENST00000409542 KCNK18Q7Z418 384 aa13.74□□□□□ -0.21
CHRNA1-205ENST00000409542 APBB1IPQ7Z5R6 666 aaPredicted RBP13.74□□□□□ -0.21
CHRNA1-205ENST00000409542 YAF2Q8IY57 180 aa13.74□□□□□ -0.21
CHRNA1-205ENST00000409542 LEMD2Q8NC56 503 aa13.74□□□□□ -0.21
CHRNA1-205ENST00000409542 APPL2Q8NEU8 664 aa13.74□□□□□ -0.21
CHRNA1-205ENST00000409542 TMEM209Q96SK2 561 aa13.74□□□□□ -0.21
CHRNA1-205ENST00000409542 PYM1Q9BRP8 204 aaKnown RBP13.74□□□□□ -0.21
CHRNA1-205ENST00000409542 TCHPQ9BT92 498 aa13.74□□□□□ -0.21
CHRNA1-205ENST00000409542 ARRDC1-AS1Q9H2J1 176 aa13.74□□□□□ -0.21
CHRNA1-205ENST00000409542 C8orf33Q9H7E9 229 aaPredicted RBP13.74□□□□□ -0.21
CHRNA1-205ENST00000409542 SLC27A5Q9Y2P5 690 aa13.74□□□□□ -0.21
CHRNA1-205ENST00000409542 PP2D1A8MPX8 630 aa13.73□□□□□ -0.21
CHRNA1-205ENST00000409542 M0QZQ0 153 aa13.73□□□□□ -0.21
CHRNA1-205ENST00000409542 NRDCO43847 1150 aa13.73□□□□□ -0.21
CHRNA1-205ENST00000409542 EXTL3O43909 919 aa13.73□□□□□ -0.21
CHRNA1-205ENST00000409542 SLFN14P0C7P3 912 aa13.73□□□□□ -0.21
CHRNA1-205ENST00000409542 PRR29P0C7W0 189 aa13.73□□□□□ -0.21
CHRNA1-205ENST00000409542 BMP6P22004 513 aa13.73□□□□□ -0.21
CHRNA1-205ENST00000409542 CNR2P34972 360 aa13.73□□□□□ -0.21
CHRNA1-205ENST00000409542 GUCY2FP51841 1108 aa13.73□□□□□ -0.21
CHRNA1-205ENST00000409542 CACNB1Q02641 598 aaPredicted RBP13.73□□□□□ -0.21
CHRNA1-205ENST00000409542 LRRC32Q14392 662 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms