RNA–Protein interactions for RNA: ENST00000409483.5

PTPRN2-205, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRN2, Length 4,711 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-205ENST00000409483 CHST7Q9NS84 486 aa17.27■□□□□ 0.36
PTPRN2-205ENST00000409483 VIRMAQ69YN4 1812 aaKnown RBP17.27■□□□□ 0.36
PTPRN2-205ENST00000409483 MAGEB2O15479 319 aa17.27■□□□□ 0.36
PTPRN2-205ENST00000409483 CYP3A4P08684 503 aa17.27■□□□□ 0.36
PTPRN2-205ENST00000409483 DSG3P32926 999 aa17.27■□□□□ 0.36
PTPRN2-205ENST00000409483 TSPY1Q01534 308 aa17.27■□□□□ 0.36
PTPRN2-205ENST00000409483 LAMTOR4Q0VGL1 99 aa17.27■□□□□ 0.36
PTPRN2-205ENST00000409483 CAVIN3Q969G5 261 aa17.27■□□□□ 0.36
PTPRN2-205ENST00000409483 CGRRF1Q99675 332 aa17.27■□□□□ 0.36
PTPRN2-205ENST00000409483 RGL2O15211 777 aa17.27■□□□□ 0.35
PTPRN2-205ENST00000409483 STAG3L1P0CL83 205 aa17.27■□□□□ 0.35
PTPRN2-205ENST00000409483 RARGP13631 454 aa17.27■□□□□ 0.35
PTPRN2-205ENST00000409483 UGCGQ16739 394 aa17.27■□□□□ 0.35
PTPRN2-205ENST00000409483 ACTL9Q8TC94 416 aa17.27■□□□□ 0.35
PTPRN2-205ENST00000409483 EPS8L1Q8TE68 723 aa17.27■□□□□ 0.35
PTPRN2-205ENST00000409483 P2RX7Q99572 595 aaKnown RBP17.27■□□□□ 0.35
PTPRN2-205ENST00000409483 SPATC1LQ9H0A9 340 aa17.27■□□□□ 0.35
PTPRN2-205ENST00000409483 SPON1Q9HCB6 807 aa17.27■□□□□ 0.35
PTPRN2-205ENST00000409483 SALL4Q9UJQ4 1053 aa17.27■□□□□ 0.35
PTPRN2-205ENST00000409483 SLC25A27O95847 323 aa17.26■□□□□ 0.35
PTPRN2-205ENST00000409483 ENO1P06733 434 aaKnown RBP17.26■□□□□ 0.35
PTPRN2-205ENST00000409483 ZNF844Q08AG5 666 aa17.26■□□□□ 0.35
PTPRN2-205ENST00000409483 TMC3Q7Z5M5 1100 aa17.26■□□□□ 0.35
PTPRN2-205ENST00000409483 ZSWIM2Q8NEG5 633 aa17.26■□□□□ 0.35
PTPRN2-205ENST00000409483 BEGAINQ9BUH8 593 aa17.26■□□□□ 0.35
PTPRN2-205ENST00000409483 TSSK1BQ9BXA7 367 aa17.26■□□□□ 0.35
PTPRN2-205ENST00000409483 MRPL42Q9Y6G3 142 aaKnown RBP17.26■□□□□ 0.35
PTPRN2-205ENST00000409483 CACNA1FO60840 1977 aa17.26■□□□□ 0.35
PTPRN2-205ENST00000409483 PEX10O60683 326 aa17.26■□□□□ 0.35
PTPRN2-205ENST00000409483 PRUNE1Q86TP1 453 aa17.26■□□□□ 0.35
PTPRN2-205ENST00000409483 THEM5Q8N1Q8 247 aa17.26■□□□□ 0.35
PTPRN2-205ENST00000409483 SHISA4Q96DD7 197 aa17.26■□□□□ 0.35
PTPRN2-205ENST00000409483 VPS39Q96JC1 886 aa17.26■□□□□ 0.35
PTPRN2-205ENST00000409483 DPP3Q9NY33 737 aa17.26■□□□□ 0.35
PTPRN2-205ENST00000409483 HMBSP08397 361 aa17.26■□□□□ 0.35
PTPRN2-205ENST00000409483 CENPCQ03188 943 aa17.26■□□□□ 0.35
PTPRN2-205ENST00000409483 LLGL2Q6P1M3 1020 aa17.26■□□□□ 0.35
PTPRN2-205ENST00000409483 SLC7A14Q8TBB6 771 aa17.26■□□□□ 0.35
PTPRN2-205ENST00000409483 SAE1Q9UBE0 346 aaPredicted RBP17.26■□□□□ 0.35
PTPRN2-205ENST00000409483 LCMT1Q9UIC8 334 aa17.26■□□□□ 0.35
PTPRN2-205ENST00000409483 POLIQ9UNA4 740 aa17.26■□□□□ 0.35
PTPRN2-205ENST00000409483 CCT8L1PA6NM43 557 aa17.26■□□□□ 0.35
PTPRN2-205ENST00000409483 ADM5C9JUS6 153 aa17.26■□□□□ 0.35
PTPRN2-205ENST00000409483 RAD23BP54727 409 aa17.26■□□□□ 0.35
PTPRN2-205ENST00000409483 MPZL3Q6UWV2 235 aa17.26■□□□□ 0.35
PTPRN2-205ENST00000409483 IRF2BP2Q7Z5L9 587 aa17.26■□□□□ 0.35
PTPRN2-205ENST00000409483 PIP4K2CQ8TBX8 421 aa17.26■□□□□ 0.35
PTPRN2-205ENST00000409483 LRGUKQ96M69 825 aa17.26■□□□□ 0.35
PTPRN2-205ENST00000409483 RSAD1Q9HA92 442 aa17.26■□□□□ 0.35
PTPRN2-205ENST00000409483 KIF9Q9HAQ2 790 aa17.26■□□□□ 0.35
PTPRN2-205ENST00000409483 CYP3A7-CYP3A51PA0A087WV96 503 aa17.25■□□□□ 0.35
PTPRN2-205ENST00000409483 NEMP1O14524 444 aa17.25■□□□□ 0.35
PTPRN2-205ENST00000409483 CYP3A7P24462 503 aa17.25■□□□□ 0.35
PTPRN2-205ENST00000409483 SLC35G1Q2M3R5 365 aa17.25■□□□□ 0.35
PTPRN2-205ENST00000409483 ABRAQ8N0Z2 381 aa17.25■□□□□ 0.35
PTPRN2-205ENST00000409483 FBXO41Q8TF61 875 aa17.25■□□□□ 0.35
PTPRN2-205ENST00000409483 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.25■□□□□ 0.35
PTPRN2-205ENST00000409483 MAP3K7O43318 606 aa17.25■□□□□ 0.35
PTPRN2-205ENST00000409483 SMIM24O75264 130 aa17.25■□□□□ 0.35
PTPRN2-205ENST00000409483 NCAPGQ9BPX3 1015 aa17.25■□□□□ 0.35
PTPRN2-205ENST00000409483 SHCBP1LQ9BZQ2 653 aa17.25■□□□□ 0.35
PTPRN2-205ENST00000409483 SARS2Q9NP81 518 aaKnown RBP17.25■□□□□ 0.35
PTPRN2-205ENST00000409483 PIAS1O75925 651 aa17.25■□□□□ 0.35
PTPRN2-205ENST00000409483 IL18RAPO95256 599 aa17.25■□□□□ 0.35
PTPRN2-205ENST00000409483 MX2P20592 715 aa17.25■□□□□ 0.35
PTPRN2-205ENST00000409483 GNL1P36915 607 aaPredicted RBP17.25■□□□□ 0.35
PTPRN2-205ENST00000409483 FOXD4Q12950 439 aaPredicted RBP17.25■□□□□ 0.35
PTPRN2-205ENST00000409483 ATP13A4Q4VNC1 1196 aa17.25■□□□□ 0.35
PTPRN2-205ENST00000409483 FASTKD1Q53R41 847 aaKnown RBP17.25■□□□□ 0.35
PTPRN2-205ENST00000409483 C11orf63Q6NUN7 778 aa17.25■□□□□ 0.35
PTPRN2-205ENST00000409483 TRIM56Q9BRZ2 755 aaKnown RBP17.25■□□□□ 0.35
PTPRN2-205ENST00000409483 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.25■□□□□ 0.357e-7■■■■■ 36.3
PTPRN2-205ENST00000409483 ANGPTL3Q9Y5C1 460 aa17.25■□□□□ 0.35
PTPRN2-205ENST00000409483 FAM208AQ9UK61 1670 aaKnown RBP17.25■□□□□ 0.35
PTPRN2-205ENST00000409483 ASAP2O43150 1006 aa17.25■□□□□ 0.35
PTPRN2-205ENST00000409483 SYF2O95926 243 aaKnown RBP17.25■□□□□ 0.35
PTPRN2-205ENST00000409483 BTBD8Q5XKL5 378 aa17.25■□□□□ 0.35
PTPRN2-205ENST00000409483 NDUFAF2Q8N183 169 aa17.25■□□□□ 0.35
PTPRN2-205ENST00000409483 FAM111AQ96PZ2 611 aa17.25■□□□□ 0.35
PTPRN2-205ENST00000409483 ROPN1BQ9BZX4 212 aaPredicted RBP17.25■□□□□ 0.35
PTPRN2-205ENST00000409483 ROPN1Q9HAT0 212 aaPredicted RBP17.25■□□□□ 0.35
PTPRN2-205ENST00000409483 PLEKHA5Q9HAU0 1116 aa17.25■□□□□ 0.35
PTPRN2-205ENST00000409483 PIH1D1Q9NWS0 290 aaKnown RBP17.25■□□□□ 0.35
PTPRN2-205ENST00000409483 SMG5Q9UPR3 1016 aaKnown RBP17.25■□□□□ 0.35
PTPRN2-205ENST00000409483 CLGNO14967 610 aa17.24■□□□□ 0.35
PTPRN2-205ENST00000409483 LUC7L3O95232 432 aaKnown RBP17.24■□□□□ 0.35
PTPRN2-205ENST00000409483 INSRRP14616 1297 aa17.24■□□□□ 0.35
PTPRN2-205ENST00000409483 DEUP1Q05D60 604 aa17.24■□□□□ 0.35
PTPRN2-205ENST00000409483 TTMPQ5BVD1 217 aa17.24■□□□□ 0.35
PTPRN2-205ENST00000409483 SH3BP5LQ7L8J4 393 aa17.24■□□□□ 0.35
PTPRN2-205ENST00000409483 RAB44Q7Z6P3 723 aaPredicted RBP17.24■□□□□ 0.35
PTPRN2-205ENST00000409483 FAM131BQ86XD5 332 aa17.24■□□□□ 0.35
PTPRN2-205ENST00000409483 FBXO36Q8NEA4 188 aa17.24■□□□□ 0.35
PTPRN2-205ENST00000409483 SLC16A10Q8TF71 515 aa17.24■□□□□ 0.35
PTPRN2-205ENST00000409483 SENP1Q9P0U3 644 aa17.24■□□□□ 0.35
PTPRN2-205ENST00000409483 AFDNP55196 1824 aaKnown RBP17.24■□□□□ 0.35
PTPRN2-205ENST00000409483 TRIM49D1C9J1S8 452 aa17.24■□□□□ 0.35
PTPRN2-205ENST00000409483 ZSCAN5DPP0CG00 497 aa17.24■□□□□ 0.35
PTPRN2-205ENST00000409483 SKIP12755 728 aa17.24■□□□□ 0.35
PTPRN2-205ENST00000409483 NSUN2Q08J23 767 aaKnown RBP eCLIP17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms